RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C YJL049WP47048 450 aa5.45□□□□□ -1.54
CDC9YDL164C TUB4P53378 473 aa5.45□□□□□ -1.54
CDC9YDL164C ESF1Q06344 628 aaKnown RBP5.45□□□□□ -1.54
CDC9YDL164C YOR378WQ08902 515 aa5.45□□□□□ -1.54
CDC9YDL164C FUR4P05316 633 aaKnown RBP5.44□□□□□ -1.54
CDC9YDL164C MET6P05694 767 aaKnown RBP5.44□□□□□ -1.54
CDC9YDL164C NFU1P32860 256 aa5.44□□□□□ -1.54
CDC9YDL164C PUN1Q06991 263 aa5.44□□□□□ -1.54
CDC9YDL164C PIF1P07271 859 aa5.44□□□□□ -1.54
CDC9YDL164C CYC8P14922 966 aa5.44□□□□□ -1.54
CDC9YDL164C TY4A-JP47023 414 aa5.44□□□□□ -1.54
CDC9YDL164C TRS120Q04183 1289 aa5.44□□□□□ -1.54
CDC9YDL164C CSC1Q06538 782 aa5.44□□□□□ -1.54
CDC9YDL164C RAD2P07276 1031 aa5.43□□□□□ -1.54
CDC9YDL164C YNR029CP53729 429 aaKnown RBP5.43□□□□□ -1.54
CDC9YDL164C GIR2Q03768 265 aaPredicted RBP5.43□□□□□ -1.54
CDC9YDL164C YGR161W-CQ3E744 92 aa5.43□□□□□ -1.54
CDC9YDL164C MPH3P0CE00 602 aa5.43□□□□□ -1.54
CDC9YDL164C DUT1P33317 147 aa5.43□□□□□ -1.54
CDC9YDL164C VPS24P36095 224 aaKnown RBP5.43□□□□□ -1.54
CDC9YDL164C YEL023CP39992 682 aa5.43□□□□□ -1.54
CDC9YDL164C MAD1P40957 749 aa5.43□□□□□ -1.54
CDC9YDL164C WRS1Q12109 432 aaKnown RBP5.43□□□□□ -1.54
CDC9YDL164C TRP5P00931 707 aaKnown RBP5.42□□□□□ -1.54
CDC9YDL164C AI4P03878 556 aa5.42□□□□□ -1.54
CDC9YDL164C ERR1P0CX10 437 aa5.42□□□□□ -1.54
CDC9YDL164C ERR2P0CX11 437 aa5.42□□□□□ -1.54
CDC9YDL164C TRX2P22803 104 aaKnown RBP5.42□□□□□ -1.54
CDC9YDL164C RAD27P26793 382 aa5.42□□□□□ -1.54
CDC9YDL164C PAF1P38351 445 aa5.42□□□□□ -1.54
CDC9YDL164C TIF11P38912 153 aaKnown RBP5.42□□□□□ -1.54
CDC9YDL164C IES5P40060 125 aa5.42□□□□□ -1.54
CDC9YDL164C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
CDC9YDL164C FRA1Q07825 749 aa5.42□□□□□ -1.54
CDC9YDL164C THS1P04801 734 aaKnown RBP5.41□□□□□ -1.54
CDC9YDL164C HAL5P38970 855 aaKnown RBP5.41□□□□□ -1.54
CDC9YDL164C ERP2P39704 215 aa5.41□□□□□ -1.54
CDC9YDL164C YFR016CP43597 1233 aaKnown RBP5.41□□□□□ -1.54
CDC9YDL164C YJR120WP47157 116 aa5.41□□□□□ -1.54
CDC9YDL164C TGL2P54857 326 aa5.41□□□□□ -1.54
CDC9YDL164C ENV9Q08651 330 aa5.41□□□□□ -1.54
CDC9YDL164C TUM1Q08686 304 aaKnown RBP5.41□□□□□ -1.54
CDC9YDL164C KAR1P11927 433 aa5.41□□□□□ -1.54
CDC9YDL164C BUD31P25337 157 aaPredicted RBP5.41□□□□□ -1.54
CDC9YDL164C SPP1Q03012 353 aa5.41□□□□□ -1.54
CDC9YDL164C HAP4P14064 554 aa5.4□□□□□ -1.54
CDC9YDL164C RPB10P22139 70 aa5.4□□□□□ -1.54
CDC9YDL164C TOA1P32773 286 aa5.4□□□□□ -1.54
CDC9YDL164C PTC4P38089 393 aa5.4□□□□□ -1.54
CDC9YDL164C POL5P39985 1022 aaKnown RBP5.4□□□□□ -1.54
CDC9YDL164C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
CDC9YDL164C FAA4P47912 694 aaKnown RBP5.4□□□□□ -1.54
CDC9YDL164C YNL115CP53925 644 aa5.4□□□□□ -1.54
CDC9YDL164C GDE1Q02979 1223 aa5.4□□□□□ -1.54
CDC9YDL164C APC11Q12157 165 aa5.4□□□□□ -1.54
CDC9YDL164C PDI1P17967 522 aaKnown RBP5.4□□□□□ -1.55
CDC9YDL164C PWP2P25635 923 aaKnown RBP5.4□□□□□ -1.55
CDC9YDL164C STE5P32917 917 aa5.4□□□□□ -1.55
CDC9YDL164C FAA3P39002 694 aa5.4□□□□□ -1.55
CDC9YDL164C AGE1Q04412 482 aa5.4□□□□□ -1.55
CDC9YDL164C COG4Q06096 861 aa5.4□□□□□ -1.55
CDC9YDL164C IOC2Q12072 812 aa5.4□□□□□ -1.55
CDC9YDL164C TSC13Q99190 310 aa5.4□□□□□ -1.55
CDC9YDL164C ULI1P43604 169 aa5.39□□□□□ -1.55
CDC9YDL164C YGL081WP53156 320 aa5.39□□□□□ -1.55
CDC9YDL164C NKP1Q12493 238 aa5.39□□□□□ -1.55
CDC9YDL164C SOH1P38633 127 aa5.39□□□□□ -1.55
CDC9YDL164C RTT106P40161 455 aa5.39□□□□□ -1.55
CDC9YDL164C YGR122WP53272 402 aa5.39□□□□□ -1.55
CDC9YDL164C JIP4Q03361 876 aa5.39□□□□□ -1.55
CDC9YDL164C TMA64Q04600 565 aaKnown RBP5.39□□□□□ -1.55
CDC9YDL164C HXK1P04806 485 aaKnown RBP5.38□□□□□ -1.55
CDC9YDL164C RAD4P14736 754 aa5.38□□□□□ -1.55
CDC9YDL164C GRX7P38068 203 aa5.38□□□□□ -1.55
CDC9YDL164C CRP1P38845 465 aaKnown RBP5.38□□□□□ -1.55
CDC9YDL164C FIG4P42837 879 aa5.38□□□□□ -1.55
CDC9YDL164C DAN4P47179 1161 aa5.38□□□□□ -1.55
CDC9YDL164C YGR053CP53234 283 aa5.38□□□□□ -1.55
CDC9YDL164C RMD1Q03441 430 aa5.38□□□□□ -1.55
CDC9YDL164C YRR1Q12172 810 aa5.38□□□□□ -1.55
CDC9YDL164C RPL8AP17076 256 aaKnown RBP5.37□□□□□ -1.55
CDC9YDL164C PRI2P20457 528 aa5.37□□□□□ -1.55
CDC9YDL164C GAS4Q08271 471 aa5.37□□□□□ -1.55
CDC9YDL164C PHO8P11491 566 aa5.37□□□□□ -1.55
CDC9YDL164C KEX2P13134 814 aa5.37□□□□□ -1.55
CDC9YDL164C SPF1P39986 1215 aaKnown RBP5.37□□□□□ -1.55
CDC9YDL164C TFB4Q12004 338 aa5.37□□□□□ -1.55
CDC9YDL164C NOP14Q99207 810 aaKnown RBP5.37□□□□□ -1.55
CDC9YDL164C YBR197CP38306 217 aa5.36□□□□□ -1.55
CDC9YDL164C HOS4P40480 1083 aa5.36□□□□□ -1.55
CDC9YDL164C MSH4P40965 878 aaPredicted RBP5.36□□□□□ -1.55
CDC9YDL164C PUS6P53294 404 aa5.36□□□□□ -1.55
CDC9YDL164C CWC22P53333 577 aaKnown RBP5.36□□□□□ -1.55
CDC9YDL164C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
CDC9YDL164C SRM1P21827 482 aa5.36□□□□□ -1.55
CDC9YDL164C NOP2P40991 618 aaKnown RBP5.36□□□□□ -1.55
CDC9YDL164C CLN2P20438 545 aa5.35□□□□□ -1.55
CDC9YDL164C PET112P33893 541 aa5.35□□□□□ -1.55
CDC9YDL164C RSP5P39940 809 aaKnown RBP5.35□□□□□ -1.55
CDC9YDL164C GPG1P53130 126 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms