RNA–Protein interactions for RNA: ENST00000641968.1

CASC19-271, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 842 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-271ENST00000641968 TMEM134Q9H6X4 195 aa10.03□□□□□ -0.8
CASC19-271ENST00000641968 TSR3Q9UJK0 312 aaKnown RBP10.03□□□□□ -0.8
CASC19-271ENST00000641968 IRF6O14896 467 aa10.02□□□□□ -0.81
CASC19-271ENST00000641968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.01□□□□□ -0.81
CASC19-271ENST00000641968 PPP4CP60510 307 aa10.01□□□□□ -0.81
CASC19-271ENST00000641968 BARGINQ6ZT62 677 aa10.01□□□□□ -0.81
CASC19-271ENST00000641968 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
CASC19-271ENST00000641968 CCDC102AQ96A19 550 aa10.01□□□□□ -0.81
CASC19-271ENST00000641968 MINK1Q8N4C8 1332 aaPredicted RBP10.01□□□□□ -0.81
CASC19-271ENST00000641968 SLF2Q8IX21 1173 aa9.99□□□□□ -0.81
CASC19-271ENST00000641968 SLC4A3P48751 1232 aa9.96□□□□□ -0.82
CASC19-271ENST00000641968 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
CASC19-271ENST00000641968 SLC10A3P09131 477 aa9.93□□□□□ -0.82
CASC19-271ENST00000641968 APLP1P51693 650 aa9.93□□□□□ -0.82
CASC19-271ENST00000641968 MDM2Q00987 491 aaPredicted RBP9.93□□□□□ -0.82
CASC19-271ENST00000641968 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
CASC19-271ENST00000641968 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
CASC19-271ENST00000641968 DDX11L8A8MPP1 907 aa9.91□□□□□ -0.82
CASC19-271ENST00000641968 SLC24A3Q9HC58 644 aa9.91□□□□□ -0.82
CASC19-271ENST00000641968 CFHP08603 1231 aa9.89□□□□□ -0.83
CASC19-271ENST00000641968 RDH13Q8NBN7 331 aa9.89□□□□□ -0.83
CASC19-271ENST00000641968 NECTIN2Q92692 538 aa9.89□□□□□ -0.83
CASC19-271ENST00000641968 CCDC180Q9P1Z9 1646 aa9.89□□□□□ -0.83
CASC19-271ENST00000641968 AK7Q96M32 723 aa9.87□□□□□ -0.83
CASC19-271ENST00000641968 REPIN1Q9BWE0 567 aaKnown RBP9.87□□□□□ -0.83
CASC19-271ENST00000641968 TRIM66O15016 1216 aa9.86□□□□□ -0.83
CASC19-271ENST00000641968 KMT5BQ4FZB7 885 aa9.85□□□□□ -0.83
CASC19-271ENST00000641968 RSPH4AQ5TD94 716 aa9.85□□□□□ -0.83
CASC19-271ENST00000641968 SULF1Q8IWU6 871 aa9.85□□□□□ -0.83
CASC19-271ENST00000641968 MTRQ99707 1265 aa9.85□□□□□ -0.83
CASC19-271ENST00000641968 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
CASC19-271ENST00000641968 ITGBL1O95965 494 aaPredicted RBP9.84□□□□□ -0.83
CASC19-271ENST00000641968 CLCN1P35523 988 aa9.84□□□□□ -0.83
CASC19-271ENST00000641968 COPS2P61201 443 aa9.84□□□□□ -0.83
CASC19-271ENST00000641968 TTLL12Q14166 644 aaPredicted RBP9.84□□□□□ -0.83
CASC19-271ENST00000641968 TJAP1Q5JTD0 557 aa9.84□□□□□ -0.83
CASC19-271ENST00000641968 TMUB1Q9BVT8 246 aa9.84□□□□□ -0.83
CASC19-271ENST00000641968 ACTN4O43707 911 aaKnown RBP9.83□□□□□ -0.84
CASC19-271ENST00000641968 AMHR2Q16671 573 aa9.83□□□□□ -0.84
CASC19-271ENST00000641968 PRR14Q9BWN1 585 aa9.83□□□□□ -0.84
CASC19-271ENST00000641968 PCDHB3Q9Y5E6 796 aa9.83□□□□□ -0.84
CASC19-271ENST00000641968 KCNC4Q03721 635 aa9.82□□□□□ -0.84
CASC19-271ENST00000641968 ZNF516Q92618 1163 aa9.82□□□□□ -0.84
CASC19-271ENST00000641968 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
CASC19-271ENST00000641968 CD46P15529 392 aa9.81□□□□□ -0.84
CASC19-271ENST00000641968 GCGRP47871 477 aa9.81□□□□□ -0.84
CASC19-271ENST00000641968 BLOC1S3Q6QNY0 202 aa9.81□□□□□ -0.84
CASC19-271ENST00000641968 PUS10Q3MIT2 529 aaKnown RBP9.8□□□□□ -0.84
CASC19-271ENST00000641968 IL21Q9HBE4 155 aa9.8□□□□□ -0.84
CASC19-271ENST00000641968 SSTR3P32745 418 aaPredicted RBP9.79□□□□□ -0.84
CASC19-271ENST00000641968 PDE4DQ08499 809 aa9.79□□□□□ -0.84
CASC19-271ENST00000641968 FUT2Q10981 343 aa9.79□□□□□ -0.84
CASC19-271ENST00000641968 GIGYF2Q6Y7W6 1299 aaKnown RBP9.79□□□□□ -0.84
CASC19-271ENST00000641968 PARP9Q8IXQ6 854 aa9.79□□□□□ -0.84
CASC19-271ENST00000641968 TPRNQ4KMQ1 711 aa9.78□□□□□ -0.84
CASC19-271ENST00000641968 IFFO2Q5TF58 517 aa9.77□□□□□ -0.85
CASC19-271ENST00000641968 NKX2-3Q8TAU0 364 aa9.76□□□□□ -0.85
CASC19-271ENST00000641968 ZPR1O75312 459 aa9.75□□□□□ -0.85
CASC19-271ENST00000641968 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
CASC19-271ENST00000641968 TLL1O43897 1013 aa9.73□□□□□ -0.85
CASC19-271ENST00000641968 KDM4AO75164 1064 aa9.73□□□□□ -0.85
CASC19-271ENST00000641968 MS4A1P11836 297 aa9.73□□□□□ -0.85
CASC19-271ENST00000641968 MORN1Q5T089 497 aa9.73□□□□□ -0.85
CASC19-271ENST00000641968 SCUBE3Q8IX30 993 aa9.73□□□□□ -0.85
CASC19-271ENST00000641968 A0A0G2JS52 829 aa9.72□□□□□ -0.85
CASC19-271ENST00000641968 NR1I2O75469 434 aa9.72□□□□□ -0.85
CASC19-271ENST00000641968 HLA-CQ95604 372 aa9.71□□□□□ -0.86
CASC19-271ENST00000641968 BEGAINQ9BUH8 593 aa9.71□□□□□ -0.86
CASC19-271ENST00000641968 SLC27A5Q9Y2P5 690 aa9.71□□□□□ -0.86
CASC19-271ENST00000641968 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
CASC19-271ENST00000641968 GPBP1L1Q9HC44 474 aaPredicted RBP9.69□□□□□ -0.86
CASC19-271ENST00000641968 PRKCSHP14314 528 aaPredicted RBP9.68□□□□□ -0.86
CASC19-271ENST00000641968 GUCA2AQ02747 115 aa9.68□□□□□ -0.86
CASC19-271ENST00000641968 GRIPAP1Q4V328 841 aa9.68□□□□□ -0.86
CASC19-271ENST00000641968 SPIRE2Q8WWL2 714 aa9.68□□□□□ -0.86
CASC19-271ENST00000641968 HOXA2O43364 376 aa9.67□□□□□ -0.86
CASC19-271ENST00000641968 USP46P62068 366 aa9.66□□□□□ -0.86
CASC19-271ENST00000641968 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
CASC19-271ENST00000641968 ADH1BP00325 375 aa9.65□□□□□ -0.86
CASC19-271ENST00000641968 RNF19BQ6ZMZ0 732 aa9.65□□□□□ -0.86
CASC19-271ENST00000641968 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
CASC19-271ENST00000641968 SPSB2Q99619 263 aa9.65□□□□□ -0.86
CASC19-271ENST00000641968 NDUFV2P19404 249 aa9.64□□□□□ -0.87
CASC19-271ENST00000641968 KDM4CQ9H3R0 1056 aa9.64□□□□□ -0.87
CASC19-271ENST00000641968 S1PR4O95977 384 aa9.63□□□□□ -0.87
CASC19-271ENST00000641968 BRICD5Q6PL45 260 aa9.63□□□□□ -0.87
CASC19-271ENST00000641968 TBC1D2Q9BYX2 928 aa9.63□□□□□ -0.87
CASC19-271ENST00000641968 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.63□□□□□ -0.87
CASC19-271ENST00000641968 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
CASC19-271ENST00000641968 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
CASC19-271ENST00000641968 PPEF1O14829 653 aaPredicted RBP9.61□□□□□ -0.87
CASC19-271ENST00000641968 SLC6A16Q9GZN6 736 aa9.61□□□□□ -0.87
CASC19-271ENST00000641968 FDX1P10109 184 aa9.6□□□□□ -0.87
CASC19-271ENST00000641968 Q3C1V9 767 aa9.6□□□□□ -0.87
CASC19-271ENST00000641968 FAM160A2Q8N612 972 aaPredicted RBP9.6□□□□□ -0.87
CASC19-271ENST00000641968 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
CASC19-271ENST00000641968 PCDHGC3Q9UN70 934 aa9.6□□□□□ -0.87
CASC19-271ENST00000641968 SALL2Q9Y467 1007 aaPredicted RBP9.6□□□□□ -0.87
CASC19-271ENST00000641968 RNF223E7ERA6 249 aa9.59□□□□□ -0.87
CASC19-271ENST00000641968 GGCXP38435 758 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms