RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 MYOM2P54296 1465 aa22.95■■□□□ 1.26
PHGDH-229ENST00000641891 SMG6Q86US8 1419 aaKnown RBP22.95■■□□□ 1.26
PHGDH-229ENST00000641891 CFAP70Q5T0N1 1121 aa22.94■■□□□ 1.26
PHGDH-229ENST00000641891 NPATQ14207 1427 aa22.94■■□□□ 1.26
PHGDH-229ENST00000641891 NEO1Q92859 1461 aa22.93■■□□□ 1.26
PHGDH-229ENST00000641891 CFAP65Q6ZU64 1925 aaKnown RBP22.92■■□□□ 1.26
PHGDH-229ENST00000641891 ADGRB3O60242 1522 aa22.91■■□□□ 1.26
PHGDH-229ENST00000641891 WASHC2CQ9Y4E1 1318 aa22.9■■□□□ 1.26
PHGDH-229ENST00000641891 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
PHGDH-229ENST00000641891 ABCC3O15438 1527 aa22.89■■□□□ 1.26
PHGDH-229ENST00000641891 CHGAP10645 457 aaKnown RBP22.89■■□□□ 1.26
PHGDH-229ENST00000641891 DIP2CQ9Y2E4 1556 aa22.88■■□□□ 1.25
PHGDH-229ENST00000641891 EIF3AQ14152 1382 aaKnown RBP22.87■■□□□ 1.25
PHGDH-229ENST00000641891 NOS1P29475 1434 aa22.87■■□□□ 1.25
PHGDH-229ENST00000641891 CYB5RLQ6IPT4 315 aa22.87■■□□□ 1.25
PHGDH-229ENST00000641891 MYOM1P52179 1685 aa22.86■■□□□ 1.25
PHGDH-229ENST00000641891 SYNMO15061 1565 aa22.86■■□□□ 1.25
PHGDH-229ENST00000641891 NRXN1Q9ULB1 1477 aa22.86■■□□□ 1.25
PHGDH-229ENST00000641891 RICTORQ6R327 1708 aa22.86■■□□□ 1.25
PHGDH-229ENST00000641891 CAMSAP1Q5T5Y3 1602 aa22.85■■□□□ 1.25
PHGDH-229ENST00000641891 SIGLEC1Q9BZZ2 1709 aa22.83■■□□□ 1.25
PHGDH-229ENST00000641891 ERICH6BQ5W0A0 696 aa22.83■■□□□ 1.25
PHGDH-229ENST00000641891 CDCA8Q53HL2 280 aa22.82■■□□□ 1.24
PHGDH-229ENST00000641891 PPP4R2Q9NY27 417 aa22.82■■□□□ 1.24
PHGDH-229ENST00000641891 KDM5AP29375 1690 aaKnown RBP22.82■■□□□ 1.24
PHGDH-229ENST00000641891 PPLO60437 1756 aa22.81■■□□□ 1.24
PHGDH-229ENST00000641891 YEATS2Q9ULM3 1422 aa22.81■■□□□ 1.24
PHGDH-229ENST00000641891 SALL2Q9Y467 1007 aaPredicted RBP22.81■■□□□ 1.24
PHGDH-229ENST00000641891 KNSTRNQ9Y448 316 aa22.8■■□□□ 1.24
PHGDH-229ENST00000641891 ERVK-7P63135 1459 aa22.8■■□□□ 1.24
PHGDH-229ENST00000641891 AMER1Q5JTC6 1135 aaPredicted RBP22.79■■□□□ 1.24
PHGDH-229ENST00000641891 RIMBP3CA6NJZ7 1639 aa22.77■■□□□ 1.24
PHGDH-229ENST00000641891 RIMBP3BA6NNM3 1639 aa22.77■■□□□ 1.24
PHGDH-229ENST00000641891 RIMBP3Q9UFD9 1639 aa22.77■■□□□ 1.24
PHGDH-229ENST00000641891 PIK3C2GO75747 1445 aa22.77■■□□□ 1.24
PHGDH-229ENST00000641891 ASXL1Q8IXJ9 1541 aa22.76■■□□□ 1.23
PHGDH-229ENST00000641891 RNF123Q5XPI4 1314 aa22.76■■□□□ 1.23
PHGDH-229ENST00000641891 MYO3AQ8NEV4 1616 aa22.75■■□□□ 1.23
PHGDH-229ENST00000641891 B4GALNT3Q6L9W6 998 aa22.75■■□□□ 1.23
PHGDH-229ENST00000641891 GLI2P10070 1586 aa22.75■■□□□ 1.23
PHGDH-229ENST00000641891 SETBP1Q9Y6X0 1596 aa22.75■■□□□ 1.23
PHGDH-229ENST00000641891 BLMP54132 1417 aaPredicted RBP22.74■■□□□ 1.23
PHGDH-229ENST00000641891 PPP2R1AP30153 589 aa22.74■■□□□ 1.23
PHGDH-229ENST00000641891 PIK3C2BO00750 1634 aa22.74■■□□□ 1.23
PHGDH-229ENST00000641891 NUTM2DQ5VT03 806 aaPredicted RBP22.72■■□□□ 1.23
PHGDH-229ENST00000641891 TRAK1Q9UPV9 953 aa22.72■■□□□ 1.23
PHGDH-229ENST00000641891 ADGRB1O14514 1584 aa22.71■■□□□ 1.23
PHGDH-229ENST00000641891 TMEM132EQ6IEE7 984 aa22.71■■□□□ 1.23
PHGDH-229ENST00000641891 C14orf93Q9H972 538 aaKnown RBP22.71■■□□□ 1.23
PHGDH-229ENST00000641891 ZC3H13Q5T200 1668 aaKnown RBP22.7■■□□□ 1.22
PHGDH-229ENST00000641891 FAM69CQ0P6D2 419 aa22.7■■□□□ 1.22
PHGDH-229ENST00000641891 CENPJQ9HC77 1338 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-229ENST00000641891 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
PHGDH-229ENST00000641891 DIP2BQ9P265 1576 aa22.68■■□□□ 1.22
PHGDH-229ENST00000641891 ZMYM4Q5VZL5 1548 aa22.68■■□□□ 1.22
PHGDH-229ENST00000641891 ARHGAP31Q2M1Z3 1444 aa22.67■■□□□ 1.22
PHGDH-229ENST00000641891 INSRP06213 1382 aa22.67■■□□□ 1.22
PHGDH-229ENST00000641891 NEXMIFQ5QGS0 1516 aa22.67■■□□□ 1.22
PHGDH-229ENST00000641891 QRICH2Q9H0J4 1663 aa22.67■■□□□ 1.22
PHGDH-229ENST00000641891 ADAMTS8Q9UP79 889 aa22.67■■□□□ 1.22
PHGDH-229ENST00000641891 RBM19Q9Y4C8 960 aaKnown RBP22.67■■□□□ 1.22
PHGDH-229ENST00000641891 SBNO2Q9Y2G9 1366 aa22.67■■□□□ 1.22
PHGDH-229ENST00000641891 CDCA7LQ96GN5 454 aa22.66■■□□□ 1.22
PHGDH-229ENST00000641891 CARD14Q9BXL6 1004 aa22.66■■□□□ 1.22
PHGDH-229ENST00000641891 TSPOAP1O95153 1857 aa22.66■■□□□ 1.22
PHGDH-229ENST00000641891 NPC1L1Q9UHC9 1359 aa22.65■■□□□ 1.22
PHGDH-229ENST00000641891 SLC24A1O60721 1099 aa22.65■■□□□ 1.22
PHGDH-229ENST00000641891 IDI1Q13907 227 aa22.65■■□□□ 1.22
PHGDH-229ENST00000641891 PDE3BQ13370 1112 aa22.63■■□□□ 1.21
PHGDH-229ENST00000641891 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
PHGDH-229ENST00000641891 PREX1Q8TCU6 1659 aa22.61■■□□□ 1.21
PHGDH-229ENST00000641891 MYO5BQ9ULV0 1848 aa22.61■■□□□ 1.21
PHGDH-229ENST00000641891 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
PHGDH-229ENST00000641891 RCAN3Q9UKA8 241 aa22.6■■□□□ 1.21
PHGDH-229ENST00000641891 VGFO15240 615 aaPredicted RBP22.59■■□□□ 1.21
PHGDH-229ENST00000641891 RRP1P56182 461 aaKnown RBP22.59■■□□□ 1.21
PHGDH-229ENST00000641891 ARHGEF28Q8N1W1 1705 aaKnown RBP22.57■■□□□ 1.2
PHGDH-229ENST00000641891 FBXO31Q5XUX0 539 aaPredicted RBP22.56■■□□□ 1.2
PHGDH-229ENST00000641891 SLC52A1Q9NWF4 448 aa22.56■■□□□ 1.2
PHGDH-229ENST00000641891 TMEM131LA2VDJ0 1609 aa22.56■■□□□ 1.2
PHGDH-229ENST00000641891 SLC12A5Q9H2X9 1139 aa22.55■■□□□ 1.2
PHGDH-229ENST00000641891 NSD3Q9BZ95 1437 aa22.54■■□□□ 1.2
PHGDH-229ENST00000641891 PLEKHH1Q9ULM0 1364 aa22.54■■□□□ 1.2
PHGDH-229ENST00000641891 CCDC136Q96JN2 1154 aa22.53■■□□□ 1.2
PHGDH-229ENST00000641891 TULP4Q9NRJ4 1543 aa22.52■■□□□ 1.2
PHGDH-229ENST00000641891 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
PHGDH-229ENST00000641891 ZFYVE9O95405 1425 aa22.5■■□□□ 1.19
PHGDH-229ENST00000641891 SAFB2Q14151 953 aaKnown RBP eCLIP22.49■■□□□ 1.19
PHGDH-229ENST00000641891 EXOC6Q8TAG9 804 aa22.49■■□□□ 1.19
PHGDH-229ENST00000641891 STK26Q9P289 416 aa22.49■■□□□ 1.19
PHGDH-229ENST00000641891 CLTCQ00610 1675 aaKnown RBP22.47■■□□□ 1.19
PHGDH-229ENST00000641891 REREQ9P2R6 1566 aa22.47■■□□□ 1.19
PHGDH-229ENST00000641891 EVC2Q86UK5 1308 aa22.46■■□□□ 1.19
PHGDH-229ENST00000641891 ZNF521Q96K83 1311 aa22.46■■□□□ 1.19
PHGDH-229ENST00000641891 PLIN1O60240 522 aa22.45■■□□□ 1.18
PHGDH-229ENST00000641891 TNNT2P45379 298 aaPredicted RBP22.45■■□□□ 1.18
PHGDH-229ENST00000641891 AGLP35573 1532 aa22.45■■□□□ 1.18
PHGDH-229ENST00000641891 CABP2Q9NPB3 220 aa22.45■■□□□ 1.18
PHGDH-229ENST00000641891 MORC1Q86VD1 984 aa22.44■■□□□ 1.18
PHGDH-229ENST00000641891 MLECQ14165 292 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms