RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 GGCXP38435 758 aa11.02□□□□□ -0.65
CASC19-248ENST00000641674 PAXIP1Q6ZW49 1069 aaPredicted RBP11.02□□□□□ -0.65
CASC19-248ENST00000641674 EYA1Q99502 592 aa11.02□□□□□ -0.65
CASC19-248ENST00000641674 EMID1Q96A84 441 aaPredicted RBP11.01□□□□□ -0.65
CASC19-248ENST00000641674 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.01□□□□□ -0.65
CASC19-248ENST00000641674 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
CASC19-248ENST00000641674 NECTIN2Q92692 538 aa11□□□□□ -0.65
CASC19-248ENST00000641674 BLOC1S3Q6QNY0 202 aa10.99□□□□□ -0.65
CASC19-248ENST00000641674 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
CASC19-248ENST00000641674 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
CASC19-248ENST00000641674 RNF223E7ERA6 249 aa10.98□□□□□ -0.65
CASC19-248ENST00000641674 TLL1O43897 1013 aa10.98□□□□□ -0.65
CASC19-248ENST00000641674 ZNF775Q96BV0 537 aaPredicted RBP10.97□□□□□ -0.65
CASC19-248ENST00000641674 SLC19A1P41440 591 aa10.95□□□□□ -0.66
CASC19-248ENST00000641674 MLLT3P42568 568 aaPredicted RBP10.95□□□□□ -0.66
CASC19-248ENST00000641674 PPEF1O14829 653 aaPredicted RBP10.94□□□□□ -0.66
CASC19-248ENST00000641674 SLC4A3P48751 1232 aa10.93□□□□□ -0.66
CASC19-248ENST00000641674 FAM161AQ3B820 660 aa10.9□□□□□ -0.66
CASC19-248ENST00000641674 PRR14Q9BWN1 585 aa10.9□□□□□ -0.66
CASC19-248ENST00000641674 S1PR4O95977 384 aa10.9□□□□□ -0.67
CASC19-248ENST00000641674 SPRYD7Q5W111 196 aa10.9□□□□□ -0.67
CASC19-248ENST00000641674 POTECB2RU33 542 aa10.89□□□□□ -0.67
CASC19-248ENST00000641674 DNAJB2P25686 324 aa10.89□□□□□ -0.67
CASC19-248ENST00000641674 MYT1Q01538 1121 aa10.89□□□□□ -0.67
CASC19-248ENST00000641674 LIAT1Q6ZQX7 453 aa10.89□□□□□ -0.67
CASC19-248ENST00000641674 PTGDRQ13258 359 aa10.88□□□□□ -0.67
CASC19-248ENST00000641674 PKDCCQ504Y2 493 aa10.88□□□□□ -0.67
CASC19-248ENST00000641674 ZNF598Q86UK7 904 aaKnown RBP10.87□□□□□ -0.67
CASC19-248ENST00000641674 TMEM134Q9H6X4 195 aa10.87□□□□□ -0.67
CASC19-248ENST00000641674 ADGRG1Q9Y653 693 aa10.87□□□□□ -0.67
CASC19-248ENST00000641674 ANKLE1Q8NAG6 615 aa10.86□□□□□ -0.67
CASC19-248ENST00000641674 ACTN4O43707 911 aaKnown RBP10.85□□□□□ -0.67
CASC19-248ENST00000641674 CFHP08603 1231 aa10.85□□□□□ -0.67
CASC19-248ENST00000641674 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
CASC19-248ENST00000641674 TNFRSF10AO00220 468 aa10.84□□□□□ -0.67
CASC19-248ENST00000641674 ZNF697Q5TEC3 545 aa10.84□□□□□ -0.67
CASC19-248ENST00000641674 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
CASC19-248ENST00000641674 DGAT1O75907 488 aa10.83□□□□□ -0.68
CASC19-248ENST00000641674 SLC10A3P09131 477 aa10.82□□□□□ -0.68
CASC19-248ENST00000641674 PRR20EP86478 221 aa10.82□□□□□ -0.68
CASC19-248ENST00000641674 PRR20CP86479 221 aa10.82□□□□□ -0.68
CASC19-248ENST00000641674 PRR20DP86480 221 aa10.82□□□□□ -0.68
CASC19-248ENST00000641674 PRR20BP86481 221 aa10.82□□□□□ -0.68
CASC19-248ENST00000641674 PRR20AP86496 221 aa10.82□□□□□ -0.68
CASC19-248ENST00000641674 KMT5BQ4FZB7 885 aa10.82□□□□□ -0.68
CASC19-248ENST00000641674 PLA2G2CQ5R387 149 aa10.82□□□□□ -0.68
CASC19-248ENST00000641674 FAM187AA6NFU0 413 aa10.81□□□□□ -0.68
CASC19-248ENST00000641674 GDF9O60383 454 aa10.81□□□□□ -0.68
CASC19-248ENST00000641674 KCNV2Q8TDN2 545 aa10.81□□□□□ -0.68
CASC19-248ENST00000641674 NUTM2FA1L443 756 aa10.79□□□□□ -0.68
CASC19-248ENST00000641674 ADH1BP00325 375 aa10.79□□□□□ -0.68
CASC19-248ENST00000641674 ARHGEF1Q92888 912 aaKnown RBP10.79□□□□□ -0.68
CASC19-248ENST00000641674 ST8SIA5O15466 376 aa10.77□□□□□ -0.68
CASC19-248ENST00000641674 SLC6A16Q9GZN6 736 aa10.77□□□□□ -0.69
CASC19-248ENST00000641674 PUS10Q3MIT2 529 aaKnown RBP10.76□□□□□ -0.69
CASC19-248ENST00000641674 TSHZ2Q9NRE2 1034 aa10.76□□□□□ -0.69
CASC19-248ENST00000641674 NR1I2O75469 434 aa10.75□□□□□ -0.69
CASC19-248ENST00000641674 SCUBE3Q8IX30 993 aa10.75□□□□□ -0.69
CASC19-248ENST00000641674 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
CASC19-248ENST00000641674 FOXC1Q12948 553 aa10.73□□□□□ -0.69
CASC19-248ENST00000641674 AAASQ9NRG9 546 aa10.73□□□□□ -0.69
CASC19-248ENST00000641674 PKD2L1Q9P0L9 805 aa10.72□□□□□ -0.69
CASC19-248ENST00000641674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.71□□□□□ -0.69
CASC19-248ENST00000641674 NCAPD3P42695 1498 aa10.71□□□□□ -0.7
CASC19-248ENST00000641674 PXYLP1Q8TE99 480 aa10.7□□□□□ -0.7
CASC19-248ENST00000641674 FCHSD2O94868 740 aa10.69□□□□□ -0.7
CASC19-248ENST00000641674 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
CASC19-248ENST00000641674 SPSB2Q99619 263 aa10.69□□□□□ -0.7
CASC19-248ENST00000641674 DACH1Q9UI36 760 aa10.68□□□□□ -0.7
CASC19-248ENST00000641674 SMARCA2P51531 1590 aa10.67□□□□□ -0.7
CASC19-248ENST00000641674 SEMA3EO15041 775 aa10.66□□□□□ -0.7
CASC19-248ENST00000641674 ATAD2BQ9ULI0 1458 aa10.66□□□□□ -0.7
CASC19-248ENST00000641674 SMARCA4P51532 1647 aa10.66□□□□□ -0.7
CASC19-248ENST00000641674 LCE2AQ5TA79 106 aaPredicted RBP10.65□□□□□ -0.7
CASC19-248ENST00000641674 OATP04181 439 aa10.65□□□□□ -0.71
CASC19-248ENST00000641674 TREML4Q6UXN2 200 aa10.65□□□□□ -0.71
CASC19-248ENST00000641674 METTL3Q86U44 580 aaKnown RBP10.65□□□□□ -0.71
CASC19-248ENST00000641674 BAZ1AQ9NRL2 1556 aaPredicted RBP10.64□□□□□ -0.71
CASC19-248ENST00000641674 FCF1Q9Y324 198 aaKnown RBP10.63□□□□□ -0.71
CASC19-248ENST00000641674 ERCC6Q03468 1493 aa10.62□□□□□ -0.71
CASC19-248ENST00000641674 FECHP22830 423 aa10.62□□□□□ -0.71
CASC19-248ENST00000641674 NLRP7Q8WX94 980 aa10.62□□□□□ -0.71
CASC19-248ENST00000641674 HMGXB3Q12766 1538 aa10.61□□□□□ -0.71
CASC19-248ENST00000641674 MORN1Q5T089 497 aa10.61□□□□□ -0.71
CASC19-248ENST00000641674 TOR4AQ9NXH8 423 aa10.61□□□□□ -0.71
CASC19-248ENST00000641674 RPIAP49247 311 aa10.6□□□□□ -0.71
CASC19-248ENST00000641674 FUT2Q10981 343 aa10.6□□□□□ -0.71
CASC19-248ENST00000641674 RSPH4AQ5TD94 716 aa10.6□□□□□ -0.71
CASC19-248ENST00000641674 FAM160A2Q8N612 972 aaPredicted RBP10.6□□□□□ -0.71
CASC19-248ENST00000641674 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
CASC19-248ENST00000641674 THAP11Q96EK4 314 aa10.6□□□□□ -0.71
CASC19-248ENST00000641674 PRDM9Q9NQV7 894 aa10.6□□□□□ -0.71
CASC19-248ENST00000641674 RBM26Q5T8P6 1007 aaKnown RBP10.59□□□□□ -0.71
CASC19-248ENST00000641674 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
CASC19-248ENST00000641674 GMPR2Q9P2T1 348 aaKnown RBP10.59□□□□□ -0.71
CASC19-248ENST00000641674 BAZ1BQ9UIG0 1483 aaKnown RBP10.59□□□□□ -0.71
CASC19-248ENST00000641674 CRIPAKQ8N1N5 446 aa10.58□□□□□ -0.72
CASC19-248ENST00000641674 DDX11L8A8MPP1 907 aa10.57□□□□□ -0.72
CASC19-248ENST00000641674 HIC1Q14526 733 aa10.57□□□□□ -0.72
CASC19-248ENST00000641674 CYP4X1Q8N118 509 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms