RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
PHGDH-220ENST00000641570 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
PHGDH-220ENST00000641570 ZNF142P52746 1687 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-220ENST00000641570 TMEM2Q9UHN6 1383 aa18.48■□□□□ 0.55
PHGDH-220ENST00000641570 ANKLE2Q86XL3 938 aa18.48■□□□□ 0.55
PHGDH-220ENST00000641570 TMEM131LA2VDJ0 1609 aa18.48■□□□□ 0.55
PHGDH-220ENST00000641570 KDM5AP29375 1690 aaKnown RBP18.47■□□□□ 0.55
PHGDH-220ENST00000641570 TXNDC2Q86VQ3 553 aa18.47■□□□□ 0.55
PHGDH-220ENST00000641570 NUTM2DQ5VT03 806 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-220ENST00000641570 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
PHGDH-220ENST00000641570 MYOM2P54296 1465 aa18.43■□□□□ 0.54
PHGDH-220ENST00000641570 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
PHGDH-220ENST00000641570 SLIT1O75093 1534 aa18.4■□□□□ 0.54
PHGDH-220ENST00000641570 NEXMIFQ5QGS0 1516 aa18.4■□□□□ 0.54
PHGDH-220ENST00000641570 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-220ENST00000641570 HSPA2P54652 639 aa18.39■□□□□ 0.53
PHGDH-220ENST00000641570 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.53
PHGDH-220ENST00000641570 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
PHGDH-220ENST00000641570 ARHGAP23Q9P227 1491 aa18.38■□□□□ 0.53
PHGDH-220ENST00000641570 PLEKHG1Q9ULL1 1385 aa18.37■□□□□ 0.53
PHGDH-220ENST00000641570 MYO5BQ9ULV0 1848 aa18.37■□□□□ 0.53
PHGDH-220ENST00000641570 ROCK2O75116 1388 aaKnown RBP18.36■□□□□ 0.53
PHGDH-220ENST00000641570 PRAG1Q86YV5 1406 aa18.36■□□□□ 0.53
PHGDH-220ENST00000641570 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
PHGDH-220ENST00000641570 PPLO60437 1756 aa18.35■□□□□ 0.53
PHGDH-220ENST00000641570 NCKAP5LQ9HCH0 1330 aa18.34■□□□□ 0.53
PHGDH-220ENST00000641570 LTKP29376 864 aa18.34■□□□□ 0.53
PHGDH-220ENST00000641570 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
PHGDH-220ENST00000641570 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.53
PHGDH-220ENST00000641570 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
PHGDH-220ENST00000641570 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
PHGDH-220ENST00000641570 IFT172Q9UG01 1749 aa18.31■□□□□ 0.52
PHGDH-220ENST00000641570 LAMC1P11047 1609 aa18.3■□□□□ 0.52
PHGDH-220ENST00000641570 NRXN1Q9ULB1 1477 aa18.29■□□□□ 0.52
PHGDH-220ENST00000641570 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
PHGDH-220ENST00000641570 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-220ENST00000641570 EIF3AQ14152 1382 aaKnown RBP18.29■□□□□ 0.52
PHGDH-220ENST00000641570 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
PHGDH-220ENST00000641570 C14orf93Q9H972 538 aaKnown RBP18.28■□□□□ 0.52
PHGDH-220ENST00000641570 DIP2AQ14689 1571 aa18.28■□□□□ 0.52
PHGDH-220ENST00000641570 RALGAPBQ86X10 1494 aa18.27■□□□□ 0.52
PHGDH-220ENST00000641570 SETBP1Q9Y6X0 1596 aa18.27■□□□□ 0.52
PHGDH-220ENST00000641570 NBPF8Q3BBV2 869 aa18.27■□□□□ 0.52
PHGDH-220ENST00000641570 TBX22Q9Y458 520 aa18.25■□□□□ 0.51
PHGDH-220ENST00000641570 MED14O60244 1454 aa18.25■□□□□ 0.51
PHGDH-220ENST00000641570 IQGAP1P46940 1657 aa18.25■□□□□ 0.51
PHGDH-220ENST00000641570 STK26Q9P289 416 aa18.24■□□□□ 0.51
PHGDH-220ENST00000641570 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
PHGDH-220ENST00000641570 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
PHGDH-220ENST00000641570 KIAA1210Q9ULL0 1709 aa18.21■□□□□ 0.51
PHGDH-220ENST00000641570 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
PHGDH-220ENST00000641570 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.517e-14■■■■■ 63.8
PHGDH-220ENST00000641570 POGKQ9P215 609 aa18.21■□□□□ 0.51
PHGDH-220ENST00000641570 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
PHGDH-220ENST00000641570 NBPF1Q3BBV0 1214 aa18.2■□□□□ 0.5
PHGDH-220ENST00000641570 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
PHGDH-220ENST00000641570 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
PHGDH-220ENST00000641570 YTHDC2Q9H6S0 1430 aaKnown RBP18.18■□□□□ 0.5
PHGDH-220ENST00000641570 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
PHGDH-220ENST00000641570 USP47Q96K76 1375 aa18.17■□□□□ 0.5
PHGDH-220ENST00000641570 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
PHGDH-220ENST00000641570 METP08581 1390 aa18.17■□□□□ 0.5
PHGDH-220ENST00000641570 GPRASP1Q5JY77 1395 aa18.17■□□□□ 0.5
PHGDH-220ENST00000641570 SLC24A1O60721 1099 aa18.16■□□□□ 0.5
PHGDH-220ENST00000641570 C14orf37Q86TY3 774 aa18.16■□□□□ 0.5
PHGDH-220ENST00000641570 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
PHGDH-220ENST00000641570 KCNA6P17658 529 aa18.14■□□□□ 0.49
PHGDH-220ENST00000641570 CENPJQ9HC77 1338 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-220ENST00000641570 ABCC11Q96J66 1382 aa18.12■□□□□ 0.49
PHGDH-220ENST00000641570 ADGRB1O14514 1584 aa18.12■□□□□ 0.49
PHGDH-220ENST00000641570 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
PHGDH-220ENST00000641570 PRAM1Q96QH2 718 aa18.11■□□□□ 0.49
PHGDH-220ENST00000641570 STRCQ7RTU9 1775 aa18.1■□□□□ 0.49
PHGDH-220ENST00000641570 PTCH1Q13635 1447 aa18.1■□□□□ 0.49
PHGDH-220ENST00000641570 HSPA5P11021 654 aaKnown RBP18.1■□□□□ 0.49
PHGDH-220ENST00000641570 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-220ENST00000641570 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
PHGDH-220ENST00000641570 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.49
PHGDH-220ENST00000641570 DLC1Q96QB1 1528 aa18.08■□□□□ 0.48
PHGDH-220ENST00000641570 TECPR2O15040 1411 aa18.07■□□□□ 0.48
PHGDH-220ENST00000641570 FAM135BQ49AJ0 1406 aa18.07■□□□□ 0.48
PHGDH-220ENST00000641570 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
PHGDH-220ENST00000641570 TMF1P82094 1093 aa18.07■□□□□ 0.48
PHGDH-220ENST00000641570 CDCA8Q53HL2 280 aa18.07■□□□□ 0.48
PHGDH-220ENST00000641570 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
PHGDH-220ENST00000641570 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
PHGDH-220ENST00000641570 CPS1P31327 1500 aa18.06■□□□□ 0.48
PHGDH-220ENST00000641570 PTPRUQ92729 1446 aa18.06■□□□□ 0.48
PHGDH-220ENST00000641570 ZNF335Q9H4Z2 1342 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-220ENST00000641570 POLR3GLQ9BT43 218 aa18.05■□□□□ 0.48
PHGDH-220ENST00000641570 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
PHGDH-220ENST00000641570 MINK1Q8N4C8 1332 aaPredicted RBP18.04■□□□□ 0.48
PHGDH-220ENST00000641570 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
PHGDH-220ENST00000641570 WAPLQ7Z5K2 1190 aa18.04■□□□□ 0.48
PHGDH-220ENST00000641570 NWD1Q149M9 1564 aa18.04■□□□□ 0.48
PHGDH-220ENST00000641570 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
PHGDH-220ENST00000641570 XRN1Q8IZH2 1706 aaKnown RBP18.02■□□□□ 0.48
PHGDH-220ENST00000641570 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-220ENST00000641570 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
PHGDH-220ENST00000641570 MSH6P52701 1360 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms