RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 NCKAP5LQ9HCH0 1330 aa18.58■□□□□ 0.57
PHGDH-218ENST00000641491 EID1Q9Y6B2 187 aa18.58■□□□□ 0.56
PHGDH-218ENST00000641491 MYO3AQ8NEV4 1616 aa18.58■□□□□ 0.56
PHGDH-218ENST00000641491 KIF1BO60333 1816 aa18.57■□□□□ 0.56
PHGDH-218ENST00000641491 RPGRIP1LQ68CZ1 1315 aa18.56■□□□□ 0.56
PHGDH-218ENST00000641491 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.56■□□□□ 0.56
PHGDH-218ENST00000641491 BCANQ96GW7 911 aa18.56■□□□□ 0.56
PHGDH-218ENST00000641491 PIK3C2BO00750 1634 aa18.56■□□□□ 0.56
PHGDH-218ENST00000641491 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-218ENST00000641491 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
PHGDH-218ENST00000641491 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
PHGDH-218ENST00000641491 KDM2AQ9Y2K7 1162 aa18.53■□□□□ 0.56
PHGDH-218ENST00000641491 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-218ENST00000641491 NEURL4Q96JN8 1562 aa18.51■□□□□ 0.55
PHGDH-218ENST00000641491 SPATA31E1Q6ZUB1 1445 aa18.5■□□□□ 0.55
PHGDH-218ENST00000641491 L3MBTL2Q969R5 705 aa18.5■□□□□ 0.55
PHGDH-218ENST00000641491 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
PHGDH-218ENST00000641491 ZNF142P52746 1687 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-218ENST00000641491 TMEM2Q9UHN6 1383 aa18.48■□□□□ 0.55
PHGDH-218ENST00000641491 ANKLE2Q86XL3 938 aa18.48■□□□□ 0.55
PHGDH-218ENST00000641491 TMEM131LA2VDJ0 1609 aa18.48■□□□□ 0.55
PHGDH-218ENST00000641491 KDM5AP29375 1690 aaKnown RBP18.47■□□□□ 0.55
PHGDH-218ENST00000641491 HSPA1LP34931 641 aa18.47■□□□□ 0.55
PHGDH-218ENST00000641491 TXNDC2Q86VQ3 553 aa18.47■□□□□ 0.55
PHGDH-218ENST00000641491 NUTM2DQ5VT03 806 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-218ENST00000641491 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
PHGDH-218ENST00000641491 TOM1O60784 492 aa18.45■□□□□ 0.54
PHGDH-218ENST00000641491 MED1Q15648 1581 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-218ENST00000641491 MYOM2P54296 1465 aa18.43■□□□□ 0.54
PHGDH-218ENST00000641491 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
PHGDH-218ENST00000641491 PIP4K2BP78356 416 aa18.42■□□□□ 0.54
PHGDH-218ENST00000641491 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
PHGDH-218ENST00000641491 SLIT1O75093 1534 aa18.4■□□□□ 0.54
PHGDH-218ENST00000641491 NEXMIFQ5QGS0 1516 aa18.4■□□□□ 0.54
PHGDH-218ENST00000641491 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-218ENST00000641491 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
PHGDH-218ENST00000641491 ARHGAP23Q9P227 1491 aa18.38■□□□□ 0.53
PHGDH-218ENST00000641491 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-218ENST00000641491 PLEKHG1Q9ULL1 1385 aa18.37■□□□□ 0.53
PHGDH-218ENST00000641491 MYO5BQ9ULV0 1848 aa18.37■□□□□ 0.53
PHGDH-218ENST00000641491 ROCK2O75116 1388 aaKnown RBP18.36■□□□□ 0.53
PHGDH-218ENST00000641491 PRAG1Q86YV5 1406 aa18.36■□□□□ 0.53
PHGDH-218ENST00000641491 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
PHGDH-218ENST00000641491 PPLO60437 1756 aa18.35■□□□□ 0.53
PHGDH-218ENST00000641491 CPS1P31327 1500 aa18.35■□□□□ 0.53
PHGDH-218ENST00000641491 LTKP29376 864 aa18.34■□□□□ 0.53
PHGDH-218ENST00000641491 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.53
PHGDH-218ENST00000641491 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
PHGDH-218ENST00000641491 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
PHGDH-218ENST00000641491 IFT172Q9UG01 1749 aa18.31■□□□□ 0.52
PHGDH-218ENST00000641491 LAMC1P11047 1609 aa18.3■□□□□ 0.52
PHGDH-218ENST00000641491 NRXN1Q9ULB1 1477 aa18.29■□□□□ 0.52
PHGDH-218ENST00000641491 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
PHGDH-218ENST00000641491 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-218ENST00000641491 EIF3AQ14152 1382 aaKnown RBP18.29■□□□□ 0.52
PHGDH-218ENST00000641491 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
PHGDH-218ENST00000641491 C14orf93Q9H972 538 aaKnown RBP18.28■□□□□ 0.52
PHGDH-218ENST00000641491 DIP2AQ14689 1571 aa18.28■□□□□ 0.52
PHGDH-218ENST00000641491 RALGAPBQ86X10 1494 aa18.27■□□□□ 0.52
PHGDH-218ENST00000641491 SETBP1Q9Y6X0 1596 aa18.27■□□□□ 0.52
PHGDH-218ENST00000641491 NBPF8Q3BBV2 869 aa18.27■□□□□ 0.52
PHGDH-218ENST00000641491 TBX22Q9Y458 520 aa18.25■□□□□ 0.51
PHGDH-218ENST00000641491 MED14O60244 1454 aa18.25■□□□□ 0.51
PHGDH-218ENST00000641491 IQGAP1P46940 1657 aa18.25■□□□□ 0.51
PHGDH-218ENST00000641491 STK26Q9P289 416 aa18.24■□□□□ 0.51
PHGDH-218ENST00000641491 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
PHGDH-218ENST00000641491 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
PHGDH-218ENST00000641491 KIAA1210Q9ULL0 1709 aa18.21■□□□□ 0.51
PHGDH-218ENST00000641491 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
PHGDH-218ENST00000641491 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.517e-14■■■■■ 63.8
PHGDH-218ENST00000641491 POGKQ9P215 609 aa18.21■□□□□ 0.51
PHGDH-218ENST00000641491 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
PHGDH-218ENST00000641491 NBPF1Q3BBV0 1214 aa18.2■□□□□ 0.5
PHGDH-218ENST00000641491 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
PHGDH-218ENST00000641491 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
PHGDH-218ENST00000641491 RGS17Q9UGC6 210 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-218ENST00000641491 YTHDC2Q9H6S0 1430 aaKnown RBP18.18■□□□□ 0.5
PHGDH-218ENST00000641491 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
PHGDH-218ENST00000641491 USP47Q96K76 1375 aa18.17■□□□□ 0.5
PHGDH-218ENST00000641491 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
PHGDH-218ENST00000641491 METP08581 1390 aa18.17■□□□□ 0.5
PHGDH-218ENST00000641491 GPRASP1Q5JY77 1395 aa18.17■□□□□ 0.5
PHGDH-218ENST00000641491 SLC24A1O60721 1099 aa18.16■□□□□ 0.5
PHGDH-218ENST00000641491 C14orf37Q86TY3 774 aa18.16■□□□□ 0.5
PHGDH-218ENST00000641491 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
PHGDH-218ENST00000641491 KCNA6P17658 529 aa18.14■□□□□ 0.49
PHGDH-218ENST00000641491 CENPJQ9HC77 1338 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-218ENST00000641491 LRRC7Q96NW7 1537 aa18.13■□□□□ 0.49
PHGDH-218ENST00000641491 ABCC11Q96J66 1382 aa18.12■□□□□ 0.49
PHGDH-218ENST00000641491 ADGRB1O14514 1584 aa18.12■□□□□ 0.49
PHGDH-218ENST00000641491 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
PHGDH-218ENST00000641491 PRAM1Q96QH2 718 aa18.11■□□□□ 0.49
PHGDH-218ENST00000641491 PTCH1Q13635 1447 aa18.1■□□□□ 0.49
PHGDH-218ENST00000641491 HSPA5P11021 654 aaKnown RBP18.1■□□□□ 0.49
PHGDH-218ENST00000641491 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-218ENST00000641491 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
PHGDH-218ENST00000641491 NKTRP30414 1462 aaKnown RBP18.08■□□□□ 0.49
PHGDH-218ENST00000641491 DLC1Q96QB1 1528 aa18.08■□□□□ 0.48
PHGDH-218ENST00000641491 TECPR2O15040 1411 aa18.07■□□□□ 0.48
PHGDH-218ENST00000641491 FAM135BQ49AJ0 1406 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms