RNA–Protein interactions for RNA: ENST00000641307.1

GYPA-213, Transcript of glycophorin A (MNS blood group), humanhuman

Gene GYPA, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-213ENST00000641307 KCTD12Q96CX2 325 aaKnown RBP9.58□□□□□ -0.88
GYPA-213ENST00000641307 PHOX2BQ99453 314 aa9.58□□□□□ -0.88
GYPA-213ENST00000641307 TMEM134Q9H6X4 195 aa9.58□□□□□ -0.88
GYPA-213ENST00000641307 SAMD7Q7Z3H4 446 aa9.57□□□□□ -0.88
GYPA-213ENST00000641307 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
GYPA-213ENST00000641307 BCAMP50895 628 aa9.54□□□□□ -0.88
GYPA-213ENST00000641307 SWT1Q5T5J6 900 aaKnown RBP9.54□□□□□ -0.88
GYPA-213ENST00000641307 LRCH3Q96II8 777 aa9.54□□□□□ -0.88
GYPA-213ENST00000641307 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
GYPA-213ENST00000641307 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
GYPA-213ENST00000641307 HCSTQ9UBK5 93 aa9.52□□□□□ -0.89
GYPA-213ENST00000641307 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
GYPA-213ENST00000641307 AMHR2Q16671 573 aa9.51□□□□□ -0.89
GYPA-213ENST00000641307 AK7Q96M32 723 aa9.51□□□□□ -0.89
GYPA-213ENST00000641307 TMUB1Q9BVT8 246 aa9.51□□□□□ -0.89
GYPA-213ENST00000641307 DAXXQ9UER7 740 aaPredicted RBP9.51□□□□□ -0.89
GYPA-213ENST00000641307 SLF2Q8IX21 1173 aa9.5□□□□□ -0.89
GYPA-213ENST00000641307 TSR3Q9UJK0 312 aaKnown RBP9.5□□□□□ -0.89
GYPA-213ENST00000641307 TRIM66O15016 1216 aa9.49□□□□□ -0.89
GYPA-213ENST00000641307 NLRP7Q8WX94 980 aa9.49□□□□□ -0.89
GYPA-213ENST00000641307 SLC24A3Q9HC58 644 aa9.49□□□□□ -0.89
GYPA-213ENST00000641307 NYAP1Q6ZVC0 841 aa9.48□□□□□ -0.89
GYPA-213ENST00000641307 WBP1LQ9NX94 342 aa9.48□□□□□ -0.89
GYPA-213ENST00000641307 HPS5Q9UPZ3 1129 aa9.48□□□□□ -0.89
GYPA-213ENST00000641307 NECTIN2Q92692 538 aa9.47□□□□□ -0.89
GYPA-213ENST00000641307 PTPN5P54829 565 aa9.46□□□□□ -0.9
GYPA-213ENST00000641307 SLC10A3P09131 477 aa9.45□□□□□ -0.9
GYPA-213ENST00000641307 CLCN1P35523 988 aa9.45□□□□□ -0.9
GYPA-213ENST00000641307 PPP4CP60510 307 aa9.45□□□□□ -0.9
GYPA-213ENST00000641307 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
GYPA-213ENST00000641307 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
GYPA-213ENST00000641307 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
GYPA-213ENST00000641307 GPCPD1Q9NPB8 672 aa9.45□□□□□ -0.9
GYPA-213ENST00000641307 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
GYPA-213ENST00000641307 SULF1Q8IWU6 871 aa9.42□□□□□ -0.9
GYPA-213ENST00000641307 FAM217BQ9NTX9 383 aaPredicted RBP9.42□□□□□ -0.9
GYPA-213ENST00000641307 PARP9Q8IXQ6 854 aa9.41□□□□□ -0.9
GYPA-213ENST00000641307 RNF40O75150 1001 aa9.4□□□□□ -0.9
GYPA-213ENST00000641307 CD46P15529 392 aa9.4□□□□□ -0.9
GYPA-213ENST00000641307 APLP1P51693 650 aa9.4□□□□□ -0.9
GYPA-213ENST00000641307 PDE4DQ08499 809 aa9.4□□□□□ -0.9
GYPA-213ENST00000641307 EIF4G1Q04637 1599 aaKnown RBP9.39□□□□□ -0.91
GYPA-213ENST00000641307 DDX11L8A8MPP1 907 aa9.39□□□□□ -0.91
GYPA-213ENST00000641307 RSPH4AQ5TD94 716 aa9.39□□□□□ -0.91
GYPA-213ENST00000641307 PRR14Q9BWN1 585 aa9.39□□□□□ -0.91
GYPA-213ENST00000641307 GIGYF2Q6Y7W6 1299 aaKnown RBP9.38□□□□□ -0.91
GYPA-213ENST00000641307 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
GYPA-213ENST00000641307 CFHP08603 1231 aa9.37□□□□□ -0.91
GYPA-213ENST00000641307 GCGRP47871 477 aa9.37□□□□□ -0.91
GYPA-213ENST00000641307 TTLL12Q14166 644 aaPredicted RBP9.37□□□□□ -0.91
GYPA-213ENST00000641307 ITGBL1O95965 494 aaPredicted RBP9.36□□□□□ -0.91
GYPA-213ENST00000641307 KMT5BQ4FZB7 885 aa9.36□□□□□ -0.91
GYPA-213ENST00000641307 SSTR3P32745 418 aaPredicted RBP9.35□□□□□ -0.91
GYPA-213ENST00000641307 RDH13Q8NBN7 331 aa9.35□□□□□ -0.91
GYPA-213ENST00000641307 BAZ1AQ9NRL2 1556 aaPredicted RBP9.35□□□□□ -0.91
GYPA-213ENST00000641307 SMARCA4P51532 1647 aa9.34□□□□□ -0.91
GYPA-213ENST00000641307 PRKCSHP14314 528 aaPredicted RBP9.34□□□□□ -0.91
GYPA-213ENST00000641307 IFFO2Q5TF58 517 aa9.34□□□□□ -0.91
GYPA-213ENST00000641307 MS4A1P11836 297 aa9.33□□□□□ -0.92
GYPA-213ENST00000641307 TJAP1Q5JTD0 557 aa9.33□□□□□ -0.92
GYPA-213ENST00000641307 CC2D2AQ9P2K1 1620 aa9.33□□□□□ -0.92
GYPA-213ENST00000641307 MTRQ99707 1265 aa9.3□□□□□ -0.92
GYPA-213ENST00000641307 PCDHB3Q9Y5E6 796 aa9.3□□□□□ -0.92
GYPA-213ENST00000641307 KDM4AO75164 1064 aa9.29□□□□□ -0.92
GYPA-213ENST00000641307 FUT2Q10981 343 aa9.29□□□□□ -0.92
GYPA-213ENST00000641307 CECR2Q9BXF3 1484 aa9.28□□□□□ -0.92
GYPA-213ENST00000641307 ATP6V1AP38606 617 aa9.28□□□□□ -0.92
GYPA-213ENST00000641307 USP46P62068 366 aa9.28□□□□□ -0.92
GYPA-213ENST00000641307 BLOC1S3Q6QNY0 202 aa9.28□□□□□ -0.92
GYPA-213ENST00000641307 KDM4CQ9H3R0 1056 aa9.28□□□□□ -0.92
GYPA-213ENST00000641307 IL21Q9HBE4 155 aa9.28□□□□□ -0.92
GYPA-213ENST00000641307 MORN1Q5T089 497 aa9.27□□□□□ -0.93
GYPA-213ENST00000641307 BEGAINQ9BUH8 593 aa9.27□□□□□ -0.93
GYPA-213ENST00000641307 GPBP1L1Q9HC44 474 aaPredicted RBP9.27□□□□□ -0.93
GYPA-213ENST00000641307 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.93
GYPA-213ENST00000641307 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
GYPA-213ENST00000641307 KCNC4Q03721 635 aa9.26□□□□□ -0.93
GYPA-213ENST00000641307 SMARCA2P51531 1590 aa9.25□□□□□ -0.93
GYPA-213ENST00000641307 PEG3Q9GZU2 1588 aa9.25□□□□□ -0.93
GYPA-213ENST00000641307 HOXA2O43364 376 aa9.25□□□□□ -0.93
GYPA-213ENST00000641307 ZPR1O75312 459 aa9.25□□□□□ -0.93
GYPA-213ENST00000641307 SPIRE2Q8WWL2 714 aa9.25□□□□□ -0.93
GYPA-213ENST00000641307 ZNF516Q92618 1163 aa9.25□□□□□ -0.93
GYPA-213ENST00000641307 NR1I2O75469 434 aa9.24□□□□□ -0.93
GYPA-213ENST00000641307 COPS2P61201 443 aa9.24□□□□□ -0.93
GYPA-213ENST00000641307 PUS10Q3MIT2 529 aaKnown RBP9.24□□□□□ -0.93
GYPA-213ENST00000641307 SCUBE3Q8IX30 993 aa9.24□□□□□ -0.93
GYPA-213ENST00000641307 MROH2BQ7Z745 1585 aa9.24□□□□□ -0.93
GYPA-213ENST00000641307 GRIPAP1Q4V328 841 aa9.23□□□□□ -0.93
GYPA-213ENST00000641307 SALL2Q9Y467 1007 aaPredicted RBP9.23□□□□□ -0.93
GYPA-213ENST00000641307 DIXDC1Q155Q3 683 aa9.22□□□□□ -0.93
GYPA-213ENST00000641307 NUTM1Q86Y26 1132 aa9.22□□□□□ -0.93
GYPA-213ENST00000641307 THAP11Q96EK4 314 aa9.22□□□□□ -0.93
GYPA-213ENST00000641307 SLC27A5Q9Y2P5 690 aa9.22□□□□□ -0.93
GYPA-213ENST00000641307 WIZO95785 1651 aa9.21□□□□□ -0.93
GYPA-213ENST00000641307 GJA5P36382 358 aa9.21□□□□□ -0.94
GYPA-213ENST00000641307 NEUROD2Q15784 382 aa9.21□□□□□ -0.94
GYPA-213ENST00000641307 TBC1D2Q9BYX2 928 aa9.21□□□□□ -0.94
GYPA-213ENST00000641307 FAM117AQ9C073 453 aa9.21□□□□□ -0.94
GYPA-213ENST00000641307 HMGXB3Q12766 1538 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms