RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ITGAEP38570 1179 aa25.73■■□□□ 1.71
PHGDH-213ENST00000641272 SLC52A1Q9NWF4 448 aa25.71■■□□□ 1.71
PHGDH-213ENST00000641272 ZFYVE9O95405 1425 aa25.71■■□□□ 1.71
PHGDH-213ENST00000641272 TMEM94Q12767 1356 aa25.7■■□□□ 1.71
PHGDH-213ENST00000641272 ROCK1Q13464 1354 aa25.7■■□□□ 1.71
PHGDH-213ENST00000641272 BCANQ96GW7 911 aa25.7■■□□□ 1.7
PHGDH-213ENST00000641272 RIMS2Q9UQ26 1411 aa25.7■■□□□ 1.7
PHGDH-213ENST00000641272 RBM33Q96EV2 1170 aaKnown RBP25.69■■□□□ 1.7
PHGDH-213ENST00000641272 NKTRP30414 1462 aaKnown RBP25.67■■□□□ 1.7
PHGDH-213ENST00000641272 CHGAP10645 457 aaKnown RBP25.66■■□□□ 1.7
PHGDH-213ENST00000641272 PPP1R15AO75807 674 aaPredicted RBP25.65■■□□□ 1.7
PHGDH-213ENST00000641272 KCNA6P17658 529 aa25.65■■□□□ 1.7
PHGDH-213ENST00000641272 ROBO1Q9Y6N7 1651 aa25.64■■□□□ 1.7
PHGDH-213ENST00000641272 PLEKHG1Q9ULL1 1385 aa25.63■■□□□ 1.69
PHGDH-213ENST00000641272 CHD2O14647 1828 aaKnown RBP25.63■■□□□ 1.69
PHGDH-213ENST00000641272 PROSER2Q86WR7 435 aaPredicted RBP25.62■■□□□ 1.69
PHGDH-213ENST00000641272 PHF23Q9BUL5 403 aaPredicted RBP25.62■■□□□ 1.69
PHGDH-213ENST00000641272 NUP155O75694 1391 aa25.61■■□□□ 1.69
PHGDH-213ENST00000641272 SPHKAPQ2M3C7 1700 aa25.6■■□□□ 1.69
PHGDH-213ENST00000641272 NUTM2DQ5VT03 806 aaPredicted RBP25.59■■□□□ 1.69
PHGDH-213ENST00000641272 FAM135BQ49AJ0 1406 aa25.54■■□□□ 1.68
PHGDH-213ENST00000641272 DIP2AQ14689 1571 aa25.54■■□□□ 1.68
PHGDH-213ENST00000641272 MSH6P52701 1360 aa25.54■■□□□ 1.68
PHGDH-213ENST00000641272 ADAMTS13Q76LX8 1427 aa25.54■■□□□ 1.68
PHGDH-213ENST00000641272 PHLPP1O60346 1717 aa25.5■■□□□ 1.67
PHGDH-213ENST00000641272 HDGFP51858 240 aaKnown RBP25.49■■□□□ 1.67
PHGDH-213ENST00000641272 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.49■■□□□ 1.67
PHGDH-213ENST00000641272 NRXN3Q9Y4C0 1643 aa25.48■■□□□ 1.67
PHGDH-213ENST00000641272 TRPM2O94759 1503 aa25.48■■□□□ 1.67
PHGDH-213ENST00000641272 RRBP1Q9P2E9 1410 aaKnown RBP25.48■■□□□ 1.67
PHGDH-213ENST00000641272 CLTCL1P53675 1640 aa25.48■■□□□ 1.67
PHGDH-213ENST00000641272 TBX22Q9Y458 520 aa25.45■■□□□ 1.66
PHGDH-213ENST00000641272 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.45■■□□□ 1.66
PHGDH-213ENST00000641272 C14orf37Q86TY3 774 aa25.43■■□□□ 1.66
PHGDH-213ENST00000641272 NAIPQ13075 1403 aa25.42■■□□□ 1.66
PHGDH-213ENST00000641272 PTPRUQ92729 1446 aa25.42■■□□□ 1.66
PHGDH-213ENST00000641272 XRN1Q8IZH2 1706 aaKnown RBP25.41■■□□□ 1.66
PHGDH-213ENST00000641272 SETBP1Q9Y6X0 1596 aa25.4■■□□□ 1.66
PHGDH-213ENST00000641272 COL16A1Q07092 1604 aaPredicted RBP25.4■■□□□ 1.66
PHGDH-213ENST00000641272 SLAIN2Q9P270 581 aa25.39■■□□□ 1.66
PHGDH-213ENST00000641272 NEXMIFQ5QGS0 1516 aa25.38■■□□□ 1.65
PHGDH-213ENST00000641272 KIF1BO60333 1816 aa25.38■■□□□ 1.65
PHGDH-213ENST00000641272 ZNF326Q5BKZ1 582 aaKnown RBP25.38■■□□□ 1.65
PHGDH-213ENST00000641272 RGS17Q9UGC6 210 aaPredicted RBP25.38■■□□□ 1.65
PHGDH-213ENST00000641272 PIK3R4Q99570 1358 aa25.38■■□□□ 1.65
PHGDH-213ENST00000641272 NCOA3Q9Y6Q9 1424 aa25.35■■□□□ 1.65
PHGDH-213ENST00000641272 AMOTL2Q9Y2J4 779 aa25.33■■□□□ 1.65
PHGDH-213ENST00000641272 AHDC1Q5TGY3 1603 aaPredicted RBP25.3■■□□□ 1.64
PHGDH-213ENST00000641272 HFM1A2PYH4 1435 aa25.3■■□□□ 1.64
PHGDH-213ENST00000641272 METP08581 1390 aa25.3■■□□□ 1.64
PHGDH-213ENST00000641272 JCADQ9P266 1359 aa25.3■■□□□ 1.64
PHGDH-213ENST00000641272 NALCNQ8IZF0 1738 aa25.29■■□□□ 1.64
PHGDH-213ENST00000641272 ATF3P18847 181 aa25.28■■□□□ 1.64
PHGDH-213ENST00000641272 TRIM52Q96A61 297 aa25.28■■□□□ 1.64
PHGDH-213ENST00000641272 SETD1AO15047 1707 aaKnown RBP25.27■■□□□ 1.64
PHGDH-213ENST00000641272 CADPS2Q86UW7 1296 aa25.27■■□□□ 1.64
PHGDH-213ENST00000641272 LRP6O75581 1613 aa25.26■■□□□ 1.63
PHGDH-213ENST00000641272 POTEAQ6S8J7 498 aa25.26■■□□□ 1.63
PHGDH-213ENST00000641272 C19orf44Q9H6X5 657 aa25.26■■□□□ 1.63
PHGDH-213ENST00000641272 SHPRHQ149N8 1683 aa25.25■■□□□ 1.63
PHGDH-213ENST00000641272 ASXL1Q8IXJ9 1541 aa25.24■■□□□ 1.63
PHGDH-213ENST00000641272 DCCP43146 1447 aa25.23■■□□□ 1.63
PHGDH-213ENST00000641272 PPLO60437 1756 aa25.21■■□□□ 1.63
PHGDH-213ENST00000641272 MST1RQ04912 1400 aa25.2■■□□□ 1.63
PHGDH-213ENST00000641272 NHSL1Q5SYE7 1610 aa25.2■■□□□ 1.62
PHGDH-213ENST00000641272 BRINP3Q76B58 766 aa25.2■■□□□ 1.62
PHGDH-213ENST00000641272 ADGRL3Q9HAR2 1447 aa25.2■■□□□ 1.62
PHGDH-213ENST00000641272 SLC4A1APQ9BWU0 796 aaKnown RBP25.18■■□□□ 1.62
PHGDH-213ENST00000641272 FOXD1Q16676 465 aa25.15■■□□□ 1.62
PHGDH-213ENST00000641272 MEX3CQ5U5Q3 659 aaKnown RBP25.14■■□□□ 1.62
PHGDH-213ENST00000641272 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
PHGDH-213ENST00000641272 PTCH1Q13635 1447 aa25.12■■□□□ 1.61
PHGDH-213ENST00000641272 ROBO2Q9HCK4 1378 aa25.09■■□□□ 1.61
PHGDH-213ENST00000641272 DDX17Q92841 729 aaKnown RBP25.09■■□□□ 1.61
PHGDH-213ENST00000641272 IFT172Q9UG01 1749 aa25.09■■□□□ 1.61
PHGDH-213ENST00000641272 NUTM2BA6NNL0 878 aaPredicted RBP25.08■■□□□ 1.61
PHGDH-213ENST00000641272 NUTM2EB1AL46 878 aaPredicted RBP25.08■■□□□ 1.61
PHGDH-213ENST00000641272 NUTM2AQ8IVF1 878 aaPredicted RBP25.08■■□□□ 1.61
PHGDH-213ENST00000641272 VGFO15240 615 aaPredicted RBP25.06■■□□□ 1.6
PHGDH-213ENST00000641272 CCDC144AA2RUR9 1427 aa25.05■■□□□ 1.6
PHGDH-213ENST00000641272 SETD5Q9C0A6 1442 aa25.05■■□□□ 1.6
PHGDH-213ENST00000641272 C1orf167Q5SNV9 1468 aa25.05■■□□□ 1.6
PHGDH-213ENST00000641272 RPGRIP1LQ68CZ1 1315 aa25.03■■□□□ 1.6
PHGDH-213ENST00000641272 PRAG1Q86YV5 1406 aa25.03■■□□□ 1.6
PHGDH-213ENST00000641272 PNPLA6Q8IY17 1366 aa25■■□□□ 1.59
PHGDH-213ENST00000641272 LAMC1P11047 1609 aa24.99■■□□□ 1.59
PHGDH-213ENST00000641272 SPATA31E1Q6ZUB1 1445 aa24.99■■□□□ 1.59
PHGDH-213ENST00000641272 ADGRF5Q8IZF2 1346 aa24.99■■□□□ 1.59
PHGDH-213ENST00000641272 CDC42BPGQ6DT37 1551 aa24.98■■□□□ 1.59
PHGDH-213ENST00000641272 RGL3Q3MIN7 710 aa24.98■■□□□ 1.59
PHGDH-213ENST00000641272 ZNF772Q68DY9 489 aaPredicted RBP24.97■■□□□ 1.59
PHGDH-213ENST00000641272 KNDC1Q76NI1 1749 aa24.96■■□□□ 1.59
PHGDH-213ENST00000641272 MPHOSPH9Q99550 1183 aa24.96■■□□□ 1.59
PHGDH-213ENST00000641272 AFF2P51816 1311 aa24.95■■□□□ 1.58
PHGDH-213ENST00000641272 ORAI2Q96SN7 254 aa24.95■■□□□ 1.58
PHGDH-213ENST00000641272 LRRC59Q96AG4 307 aaKnown RBP24.94■■□□□ 1.58
PHGDH-213ENST00000641272 C8orf37Q96NL8 207 aa24.91■■□□□ 1.58
PHGDH-213ENST00000641272 STK26Q9P289 416 aa24.91■■□□□ 1.58
PHGDH-213ENST00000641272 PIK3C2GO75747 1445 aa24.9■■□□□ 1.58
PHGDH-213ENST00000641272 ANKRD30BQ9BXX2 1392 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms