RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 KIF15Q9NS87 1388 aa23.39■■□□□ 1.33
KCNC1-213ENST00000640909 TRIM52Q96A61 297 aa23.38■■□□□ 1.33
KCNC1-213ENST00000640909 RBM33Q96EV2 1170 aaKnown RBP23.38■■□□□ 1.33
KCNC1-213ENST00000640909 RXRBP28702 533 aa23.36■■□□□ 1.33
KCNC1-213ENST00000640909 IDI1Q13907 227 aa23.36■■□□□ 1.33
KCNC1-213ENST00000640909 NOS1P29475 1434 aa23.35■■□□□ 1.33
KCNC1-213ENST00000640909 SRCAPQ6ZRS2 3230 aa23.34■■□□□ 1.33
KCNC1-213ENST00000640909 PLEKHG1Q9ULL1 1385 aa23.32■■□□□ 1.32
KCNC1-213ENST00000640909 DIP2AQ14689 1571 aa23.31■■□□□ 1.32
KCNC1-213ENST00000640909 SLC52A1Q9NWF4 448 aa23.3■■□□□ 1.32
KCNC1-213ENST00000640909 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
KCNC1-213ENST00000640909 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.3■■□□□ 1.32
KCNC1-213ENST00000640909 CADPS2Q86UW7 1296 aa23.28■■□□□ 1.32
KCNC1-213ENST00000640909 RPRD2Q5VT52 1461 aaKnown RBP23.26■■□□□ 1.31
KCNC1-213ENST00000640909 BCANQ96GW7 911 aa23.25■■□□□ 1.31
KCNC1-213ENST00000640909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.25■■□□□ 1.31
KCNC1-213ENST00000640909 HDGFP51858 240 aaKnown RBP23.24■■□□□ 1.31
KCNC1-213ENST00000640909 ABCC5O15440 1437 aa23.24■■□□□ 1.31
KCNC1-213ENST00000640909 PIK3R4Q99570 1358 aa23.23■■□□□ 1.31
KCNC1-213ENST00000640909 GCC2Q8IWJ2 1684 aa23.22■■□□□ 1.31
KCNC1-213ENST00000640909 MYO5BQ9ULV0 1848 aa23.22■■□□□ 1.31
KCNC1-213ENST00000640909 C19orf44Q9H6X5 657 aa23.22■■□□□ 1.31
KCNC1-213ENST00000640909 TBX22Q9Y458 520 aa23.22■■□□□ 1.31
KCNC1-213ENST00000640909 RGS12O14924 1447 aa23.22■■□□□ 1.31
KCNC1-213ENST00000640909 RRP7BPQ9NSQ0 103 aa23.21■■□□□ 1.31
KCNC1-213ENST00000640909 DCCP43146 1447 aa23.21■■□□□ 1.31
KCNC1-213ENST00000640909 TMEM131LA2VDJ0 1609 aa23.2■■□□□ 1.3
KCNC1-213ENST00000640909 SETD5Q9C0A6 1442 aa23.2■■□□□ 1.3
KCNC1-213ENST00000640909 AFF2P51816 1311 aa23.2■■□□□ 1.3
KCNC1-213ENST00000640909 ATF3P18847 181 aa23.2■■□□□ 1.3
KCNC1-213ENST00000640909 NHSL1Q5SYE7 1610 aa23.19■■□□□ 1.3
KCNC1-213ENST00000640909 RIMS2Q9UQ26 1411 aa23.19■■□□□ 1.3
KCNC1-213ENST00000640909 C14orf37Q86TY3 774 aa23.19■■□□□ 1.3
KCNC1-213ENST00000640909 PTPN23Q9H3S7 1636 aa23.19■■□□□ 1.3
KCNC1-213ENST00000640909 DAPK1P53355 1430 aa23.18■■□□□ 1.3
KCNC1-213ENST00000640909 FOXD1Q16676 465 aa23.18■■□□□ 1.3
KCNC1-213ENST00000640909 VPS8Q8N3P4 1428 aa23.17■■□□□ 1.3
KCNC1-213ENST00000640909 PPP1R15AO75807 674 aaPredicted RBP23.17■■□□□ 1.3
KCNC1-213ENST00000640909 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
KCNC1-213ENST00000640909 RBM6P78332 1123 aaKnown RBP23.16■■□□□ 1.3
KCNC1-213ENST00000640909 BRINP3Q76B58 766 aa23.15■■□□□ 1.3
KCNC1-213ENST00000640909 ADAMTS13Q76LX8 1427 aa23.15■■□□□ 1.3
KCNC1-213ENST00000640909 ANKRD30AQ9BXX3 1397 aa23.14■■□□□ 1.3
KCNC1-213ENST00000640909 TRPM2O94759 1503 aa23.13■■□□□ 1.29
KCNC1-213ENST00000640909 NUTM2BA6NNL0 878 aaPredicted RBP23.13■■□□□ 1.29
KCNC1-213ENST00000640909 NUTM2EB1AL46 878 aaPredicted RBP23.13■■□□□ 1.29
KCNC1-213ENST00000640909 NUTM2AQ8IVF1 878 aaPredicted RBP23.13■■□□□ 1.29
KCNC1-213ENST00000640909 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.13■■□□□ 1.29
KCNC1-213ENST00000640909 ATAD2Q6PL18 1390 aa23.12■■□□□ 1.29
KCNC1-213ENST00000640909 KANK4Q5T7N3 995 aaPredicted RBP23.08■■□□□ 1.29
KCNC1-213ENST00000640909 LRRC59Q96AG4 307 aaKnown RBP23.08■■□□□ 1.29
KCNC1-213ENST00000640909 NGLY1Q96IV0 654 aa23.08■■□□□ 1.29
KCNC1-213ENST00000640909 QTRT2Q9H974 415 aaKnown RBP23.08■■□□□ 1.29
KCNC1-213ENST00000640909 NUTM2DQ5VT03 806 aaPredicted RBP23.07■■□□□ 1.28
KCNC1-213ENST00000640909 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
KCNC1-213ENST00000640909 XRN1Q8IZH2 1706 aaKnown RBP23.06■■□□□ 1.28
KCNC1-213ENST00000640909 MST1RQ04912 1400 aa23.06■■□□□ 1.28
KCNC1-213ENST00000640909 C8orf37Q96NL8 207 aa23.05■■□□□ 1.28
KCNC1-213ENST00000640909 ZRANB1Q9UGI0 708 aa23.05■■□□□ 1.28
KCNC1-213ENST00000640909 PNPLA6Q8IY17 1366 aa23.04■■□□□ 1.28
KCNC1-213ENST00000640909 UNC13BO14795 1591 aa23.03■■□□□ 1.28
KCNC1-213ENST00000640909 EP400Q96L91 3159 aa23.01■■□□□ 1.27
KCNC1-213ENST00000640909 LAMC1P11047 1609 aa23■■□□□ 1.27
KCNC1-213ENST00000640909 PTPRUQ92729 1446 aa23■■□□□ 1.27
KCNC1-213ENST00000640909 AMOTL2Q9Y2J4 779 aa23■■□□□ 1.27
KCNC1-213ENST00000640909 SETBP1Q9Y6X0 1596 aa22.99■■□□□ 1.27
KCNC1-213ENST00000640909 CCDC125Q86Z20 511 aa22.97■■□□□ 1.27
KCNC1-213ENST00000640909 ANKRD50Q9ULJ7 1429 aa22.97■■□□□ 1.27
KCNC1-213ENST00000640909 E9PCH4 1651 aa22.95■■□□□ 1.26
KCNC1-213ENST00000640909 CHIC2Q9UKJ5 165 aa22.95■■□□□ 1.26
KCNC1-213ENST00000640909 NRXN3Q9Y4C0 1643 aa22.95■■□□□ 1.26
KCNC1-213ENST00000640909 IQGAP3Q86VI3 1631 aa22.94■■□□□ 1.26
KCNC1-213ENST00000640909 PTCH1Q13635 1447 aa22.94■■□□□ 1.26
KCNC1-213ENST00000640909 ADGRL3Q9HAR2 1447 aa22.94■■□□□ 1.26
KCNC1-213ENST00000640909 TRPC5Q9UL62 973 aaPredicted RBP22.93■■□□□ 1.26
KCNC1-213ENST00000640909 NALCNQ8IZF0 1738 aa22.92■■□□□ 1.26
KCNC1-213ENST00000640909 CHGAP10645 457 aaKnown RBP22.91■■□□□ 1.26
KCNC1-213ENST00000640909 ATRNO75882 1429 aa22.91■■□□□ 1.26
KCNC1-213ENST00000640909 USP21Q9UK80 565 aa22.9■■□□□ 1.26
KCNC1-213ENST00000640909 COL22A1Q8NFW1 1626 aaPredicted RBP22.9■■□□□ 1.26
KCNC1-213ENST00000640909 FNBP4Q8N3X1 1017 aaPredicted RBP22.89■■□□□ 1.25
KCNC1-213ENST00000640909 LRP5O75197 1615 aa22.87■■□□□ 1.25
KCNC1-213ENST00000640909 ADAMTS2O95450 1211 aa22.87■■□□□ 1.25
KCNC1-213ENST00000640909 C1orf167Q5SNV9 1468 aa22.85■■□□□ 1.25
KCNC1-213ENST00000640909 SOS2Q07890 1332 aaPredicted RBP22.84■■□□□ 1.25
KCNC1-213ENST00000640909 MARF1Q9Y4F3 1742 aaKnown RBP22.82■■□□□ 1.24
KCNC1-213ENST00000640909 DDX17Q92841 729 aaKnown RBP22.82■■□□□ 1.24
KCNC1-213ENST00000640909 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.8■■□□□ 1.24
KCNC1-213ENST00000640909 SPHKAPQ2M3C7 1700 aa22.79■■□□□ 1.24
KCNC1-213ENST00000640909 METP08581 1390 aa22.79■■□□□ 1.24
KCNC1-213ENST00000640909 BLMP54132 1417 aaPredicted RBP22.79■■□□□ 1.24
KCNC1-213ENST00000640909 MYOM2P54296 1465 aa22.79■■□□□ 1.24
KCNC1-213ENST00000640909 APLP2Q06481 763 aa22.78■■□□□ 1.24
KCNC1-213ENST00000640909 BCL9LQ86UU0 1499 aa22.78■■□□□ 1.24
KCNC1-213ENST00000640909 PRAG1Q86YV5 1406 aa22.74■■□□□ 1.23
KCNC1-213ENST00000640909 GJD4Q96KN9 370 aaPredicted RBP22.71■■□□□ 1.23
KCNC1-213ENST00000640909 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
KCNC1-213ENST00000640909 ROCK1Q13464 1354 aa22.68■■□□□ 1.22
KCNC1-213ENST00000640909 NPHP3Q7Z494 1330 aa22.67■■□□□ 1.22
KCNC1-213ENST00000640909 ORAI2Q96SN7 254 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms