RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
SCARB2-224ENST00000640880 CD46P15529 392 aa11.54□□□□□ -0.56
SCARB2-224ENST00000640880 CSPP1Q1MSJ5 1256 aa11.54□□□□□ -0.56
SCARB2-224ENST00000640880 RETREG2Q8NC44 543 aa11.54□□□□□ -0.56
SCARB2-224ENST00000640880 SPTLC1O15269 473 aa11.53□□□□□ -0.56
SCARB2-224ENST00000640880 TUSC1Q2TAM9 212 aa11.53□□□□□ -0.56
SCARB2-224ENST00000640880 RSBN1LQ6PCB5 846 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-224ENST00000640880 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
SCARB2-224ENST00000640880 NUDT7P0C024 238 aa11.52□□□□□ -0.57
SCARB2-224ENST00000640880 ABL2P42684 1182 aa11.52□□□□□ -0.57
SCARB2-224ENST00000640880 AEBP1Q8IUX7 1158 aa11.52□□□□□ -0.57
SCARB2-224ENST00000640880 FAM198AQ9UFP1 575 aa11.51□□□□□ -0.57
SCARB2-224ENST00000640880 MOXD2PA6NHM9 499 aa11.5□□□□□ -0.57
SCARB2-224ENST00000640880 SULF1Q8IWU6 871 aa11.5□□□□□ -0.57
SCARB2-224ENST00000640880 CALR3Q96L12 384 aaKnown RBP11.5□□□□□ -0.57
SCARB2-224ENST00000640880 PRM3Q9NNZ6 103 aa11.5□□□□□ -0.57
SCARB2-224ENST00000640880 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
SCARB2-224ENST00000640880 QPCTQ16769 361 aa11.49□□□□□ -0.57
SCARB2-224ENST00000640880 KHSRPQ92945 711 aaKnown RBP eCLIP11.49□□□□□ -0.57
SCARB2-224ENST00000640880 EYA1Q99502 592 aa11.49□□□□□ -0.57
SCARB2-224ENST00000640880 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
SCARB2-224ENST00000640880 AP1G2O75843 785 aa11.48□□□□□ -0.57
SCARB2-224ENST00000640880 POM121CA8CG34 1229 aa11.47□□□□□ -0.57
SCARB2-224ENST00000640880 SOCS7O14512 581 aa11.47□□□□□ -0.57
SCARB2-224ENST00000640880 LILRB3O75022 631 aa11.46□□□□□ -0.57
SCARB2-224ENST00000640880 NDUFV2P19404 249 aa11.46□□□□□ -0.57
SCARB2-224ENST00000640880 COL9A1P20849 921 aa11.46□□□□□ -0.57
SCARB2-224ENST00000640880 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
SCARB2-224ENST00000640880 GLMNQ92990 594 aa11.46□□□□□ -0.57
SCARB2-224ENST00000640880 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-224ENST00000640880 PCDHB15Q9Y5E8 787 aa11.45□□□□□ -0.58
SCARB2-224ENST00000640880 USP17L8P0C7I0 530 aa11.44□□□□□ -0.58
SCARB2-224ENST00000640880 POTEJP0CG39 1038 aa11.44□□□□□ -0.58
SCARB2-224ENST00000640880 DNAJB2P25686 324 aa11.44□□□□□ -0.58
SCARB2-224ENST00000640880 GJA5P36382 358 aa11.44□□□□□ -0.58
SCARB2-224ENST00000640880 RTL5Q5HYW3 569 aaPredicted RBP11.44□□□□□ -0.58
SCARB2-224ENST00000640880 MAMSTRQ6ZN01 415 aa11.44□□□□□ -0.58
SCARB2-224ENST00000640880 NUDT18Q6ZVK8 323 aa11.44□□□□□ -0.58
SCARB2-224ENST00000640880 ZNF710Q8N1W2 664 aa11.44□□□□□ -0.58
SCARB2-224ENST00000640880 TSKSQ9UJT2 592 aa11.44□□□□□ -0.58
SCARB2-224ENST00000640880 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-224ENST00000640880 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-224ENST00000640880 NUTM2DQ5VT03 806 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-224ENST00000640880 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
SCARB2-224ENST00000640880 IRF5Q13568 498 aa11.42□□□□□ -0.58
SCARB2-224ENST00000640880 DOK7Q18PE1 504 aa11.42□□□□□ -0.58
SCARB2-224ENST00000640880 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
SCARB2-224ENST00000640880 NBPF26B4DH59 902 aa11.41□□□□□ -0.58
SCARB2-224ENST00000640880 C3orf80F5H4A9 247 aa11.41□□□□□ -0.58
SCARB2-224ENST00000640880 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
SCARB2-224ENST00000640880 SCUBE2Q9NQ36 999 aa11.41□□□□□ -0.58
SCARB2-224ENST00000640880 ABCC9O60706 1549 aa11.4□□□□□ -0.58
SCARB2-224ENST00000640880 ACIN1Q9UKV3 1341 aaKnown RBP11.4□□□□□ -0.58
SCARB2-224ENST00000640880 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.58
SCARB2-224ENST00000640880 RDH13Q8NBN7 331 aa11.4□□□□□ -0.58
SCARB2-224ENST00000640880 PNMA3Q9UL41 463 aa11.4□□□□□ -0.58
SCARB2-224ENST00000640880 PPP1R3GB7ZBB8 358 aa11.39□□□□□ -0.59
SCARB2-224ENST00000640880 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
SCARB2-224ENST00000640880 TATDN2Q93075 761 aa11.39□□□□□ -0.59
SCARB2-224ENST00000640880 BCL2L12Q9HB09 334 aa11.39□□□□□ -0.59
SCARB2-224ENST00000640880 LHX6Q9UPM6 363 aa11.39□□□□□ -0.59
SCARB2-224ENST00000640880 HOXB3P14651 431 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-224ENST00000640880 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
SCARB2-224ENST00000640880 NDUFB9Q9Y6M9 179 aa11.38□□□□□ -0.59
SCARB2-224ENST00000640880 KDM4AO75164 1064 aa11.37□□□□□ -0.59
SCARB2-224ENST00000640880 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
SCARB2-224ENST00000640880 ZBTB3Q9H5J0 574 aa11.37□□□□□ -0.59
SCARB2-224ENST00000640880 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
SCARB2-224ENST00000640880 PTPREP23469 700 aa11.36□□□□□ -0.59
SCARB2-224ENST00000640880 TMCO4Q5TGY1 634 aa11.36□□□□□ -0.59
SCARB2-224ENST00000640880 PACS2Q86VP3 889 aa11.36□□□□□ -0.59
SCARB2-224ENST00000640880 GJD4Q96KN9 370 aaPredicted RBP11.36□□□□□ -0.59
SCARB2-224ENST00000640880 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
SCARB2-224ENST00000640880 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
SCARB2-224ENST00000640880 PDE4CQ08493 712 aa11.35□□□□□ -0.59
SCARB2-224ENST00000640880 HDGFL1Q5TGJ6 251 aa11.34□□□□□ -0.59
SCARB2-224ENST00000640880 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
SCARB2-224ENST00000640880 POTEMA6NI47 508 aa11.33□□□□□ -0.6
SCARB2-224ENST00000640880 SMAPO00193 183 aa11.33□□□□□ -0.6
SCARB2-224ENST00000640880 FDX1P10109 184 aa11.33□□□□□ -0.6
SCARB2-224ENST00000640880 USP46P62068 366 aa11.33□□□□□ -0.6
SCARB2-224ENST00000640880 ADAMTS19Q8TE59 1207 aa11.33□□□□□ -0.6
SCARB2-224ENST00000640880 PBXIP1Q96AQ6 731 aa11.33□□□□□ -0.6
SCARB2-224ENST00000640880 HOXA2O43364 376 aa11.32□□□□□ -0.6
SCARB2-224ENST00000640880 RFX1P22670 979 aa11.31□□□□□ -0.6
SCARB2-224ENST00000640880 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
SCARB2-224ENST00000640880 HMX1Q9NP08 348 aaPredicted RBP11.31□□□□□ -0.6
SCARB2-224ENST00000640880 GCGRP47871 477 aa11.3□□□□□ -0.6
SCARB2-224ENST00000640880 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
SCARB2-224ENST00000640880 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
SCARB2-224ENST00000640880 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.29□□□□□ -0.6
SCARB2-224ENST00000640880 CTDSPL2Q05D32 466 aa11.29□□□□□ -0.6
SCARB2-224ENST00000640880 RSPH4AQ5TD94 716 aa11.29□□□□□ -0.6
SCARB2-224ENST00000640880 PCDHGC3Q9UN70 934 aa11.29□□□□□ -0.6
SCARB2-224ENST00000640880 MFAP1P55081 439 aaKnown RBP11.28□□□□□ -0.6
SCARB2-224ENST00000640880 GUCA2AQ02747 115 aa11.28□□□□□ -0.6
SCARB2-224ENST00000640880 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
SCARB2-224ENST00000640880 RGS22Q8NE09 1264 aa11.28□□□□□ -0.6
SCARB2-224ENST00000640880 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
SCARB2-224ENST00000640880 GPR37L1O60883 481 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms