RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.17
SCARB2-222ENST00000640634 ARHGAP23Q9P227 1491 aa16.08■□□□□ 0.16
SCARB2-222ENST00000640634 SLIT1O75093 1534 aa16.08■□□□□ 0.16
SCARB2-222ENST00000640634 TMEM2Q9UHN6 1383 aa16.08■□□□□ 0.16
SCARB2-222ENST00000640634 THEMISQ8N1K5 641 aaPredicted RBP16.08■□□□□ 0.16
SCARB2-222ENST00000640634 KIF1BO60333 1816 aa16.07■□□□□ 0.16
SCARB2-222ENST00000640634 POLR1AO95602 1720 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-222ENST00000640634 LTKP29376 864 aa16.07■□□□□ 0.16
SCARB2-222ENST00000640634 ZFYVE9O95405 1425 aa16.06■□□□□ 0.16
SCARB2-222ENST00000640634 ZBTB22O15209 634 aa16.05■□□□□ 0.16
SCARB2-222ENST00000640634 TIMELESSQ9UNS1 1208 aa16.05■□□□□ 0.16
SCARB2-222ENST00000640634 SPATA31E1Q6ZUB1 1445 aa16.05■□□□□ 0.16
SCARB2-222ENST00000640634 RIMS2Q9UQ26 1411 aa16.04■□□□□ 0.16
SCARB2-222ENST00000640634 SCAF11Q99590 1463 aaKnown RBP16.04■□□□□ 0.16
SCARB2-222ENST00000640634 NEXMIFQ5QGS0 1516 aa16.04■□□□□ 0.16
SCARB2-222ENST00000640634 ZNF326Q5BKZ1 582 aaKnown RBP16.03■□□□□ 0.16
SCARB2-222ENST00000640634 PLCB2Q00722 1185 aa16.02■□□□□ 0.16
SCARB2-222ENST00000640634 RGL3Q3MIN7 710 aa16.02■□□□□ 0.16
SCARB2-222ENST00000640634 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
SCARB2-222ENST00000640634 TXNDC2Q86VQ3 553 aa16.02■□□□□ 0.15
SCARB2-222ENST00000640634 ANKLE2Q86XL3 938 aa16.01■□□□□ 0.15
SCARB2-222ENST00000640634 IQGAP1P46940 1657 aa16■□□□□ 0.15
SCARB2-222ENST00000640634 NPHP4O75161 1426 aaPredicted RBP16■□□□□ 0.15
SCARB2-222ENST00000640634 PPLO60437 1756 aa15.99■□□□□ 0.15
SCARB2-222ENST00000640634 MED14O60244 1454 aa15.99■□□□□ 0.15
SCARB2-222ENST00000640634 IFT172Q9UG01 1749 aa15.99■□□□□ 0.15
SCARB2-222ENST00000640634 PPP1R15AO75807 674 aaPredicted RBP15.97■□□□□ 0.15
SCARB2-222ENST00000640634 NEUROD1Q13562 356 aa15.97■□□□□ 0.15
SCARB2-222ENST00000640634 EID1Q9Y6B2 187 aa15.97■□□□□ 0.15
SCARB2-222ENST00000640634 NRXN3Q9Y4C0 1643 aa15.96■□□□□ 0.15
SCARB2-222ENST00000640634 SLC26A8Q96RN1 970 aa15.95■□□□□ 0.14
SCARB2-222ENST00000640634 ADGRF5Q8IZF2 1346 aa15.94■□□□□ 0.14
SCARB2-222ENST00000640634 TPRNQ4KMQ1 711 aa15.94■□□□□ 0.14
SCARB2-222ENST00000640634 PLEKHG1Q9ULL1 1385 aa15.94■□□□□ 0.14
SCARB2-222ENST00000640634 ADAMTS13Q76LX8 1427 aa15.92■□□□□ 0.14
SCARB2-222ENST00000640634 ZNF335Q9H4Z2 1342 aaPredicted RBP15.92■□□□□ 0.14
SCARB2-222ENST00000640634 TULP1O00294 542 aaPredicted RBP15.91■□□□□ 0.14
SCARB2-222ENST00000640634 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.91■□□□□ 0.14
SCARB2-222ENST00000640634 SETBP1Q9Y6X0 1596 aa15.9■□□□□ 0.14
SCARB2-222ENST00000640634 STRCP1A6NGW2 1772 aa15.9■□□□□ 0.14
SCARB2-222ENST00000640634 CCER1Q8TC90 406 aaPredicted RBP15.9■□□□□ 0.14
SCARB2-222ENST00000640634 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
SCARB2-222ENST00000640634 DCAF11Q8TEB1 546 aa15.89■□□□□ 0.13
SCARB2-222ENST00000640634 RPGRIP1LQ68CZ1 1315 aa15.89■□□□□ 0.13
SCARB2-222ENST00000640634 SETD1AO15047 1707 aaKnown RBP15.89■□□□□ 0.13
SCARB2-222ENST00000640634 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
SCARB2-222ENST00000640634 MYOM2P54296 1465 aa15.88■□□□□ 0.13
SCARB2-222ENST00000640634 PIK3C2GO75747 1445 aa15.87■□□□□ 0.13
SCARB2-222ENST00000640634 NRXN1Q9ULB1 1477 aa15.87■□□□□ 0.13
SCARB2-222ENST00000640634 HDGFP51858 240 aaKnown RBP15.87■□□□□ 0.13
SCARB2-222ENST00000640634 L3MBTL2Q969R5 705 aa15.87■□□□□ 0.13
SCARB2-222ENST00000640634 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
SCARB2-222ENST00000640634 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
SCARB2-222ENST00000640634 METP08581 1390 aa15.86■□□□□ 0.13
SCARB2-222ENST00000640634 ASXL1Q8IXJ9 1541 aa15.86■□□□□ 0.13
SCARB2-222ENST00000640634 LTBP4Q8N2S1 1624 aa15.86■□□□□ 0.13
SCARB2-222ENST00000640634 HAP1P54257 671 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-222ENST00000640634 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
SCARB2-222ENST00000640634 DIP2AQ14689 1571 aa15.84■□□□□ 0.13
SCARB2-222ENST00000640634 HOMEZQ8IX15 550 aa15.82■□□□□ 0.12
SCARB2-222ENST00000640634 CFAP70Q5T0N1 1121 aa15.82■□□□□ 0.12
SCARB2-222ENST00000640634 RBM33Q96EV2 1170 aaKnown RBP15.82■□□□□ 0.12
SCARB2-222ENST00000640634 TBX22Q9Y458 520 aa15.81■□□□□ 0.12
SCARB2-222ENST00000640634 NWD1Q149M9 1564 aa15.81■□□□□ 0.12
SCARB2-222ENST00000640634 CHD2O14647 1828 aaKnown RBP15.81■□□□□ 0.12
SCARB2-222ENST00000640634 TONSLQ96HA7 1378 aa15.8■□□□□ 0.12
SCARB2-222ENST00000640634 TMEM132EQ6IEE7 984 aa15.8■□□□□ 0.12
SCARB2-222ENST00000640634 PRAG1Q86YV5 1406 aa15.8■□□□□ 0.12
SCARB2-222ENST00000640634 XRN1Q8IZH2 1706 aaKnown RBP15.79■□□□□ 0.12
SCARB2-222ENST00000640634 KCNA6P17658 529 aa15.78■□□□□ 0.12
SCARB2-222ENST00000640634 CLSPNQ9HAW4 1339 aa15.78■□□□□ 0.12
SCARB2-222ENST00000640634 ADGRB1O14514 1584 aa15.77■□□□□ 0.12
SCARB2-222ENST00000640634 LRRC7Q96NW7 1537 aa15.77■□□□□ 0.12
SCARB2-222ENST00000640634 LAMC1P11047 1609 aa15.77■□□□□ 0.11
SCARB2-222ENST00000640634 NBPF8Q3BBV2 869 aa15.77■□□□□ 0.11
SCARB2-222ENST00000640634 C14orf93Q9H972 538 aaKnown RBP15.77■□□□□ 0.11
SCARB2-222ENST00000640634 XIRP1Q702N8 1843 aaKnown RBP15.76■□□□□ 0.11
SCARB2-222ENST00000640634 AMOTL2Q9Y2J4 779 aa15.76■□□□□ 0.11
SCARB2-222ENST00000640634 STK26Q9P289 416 aa15.75■□□□□ 0.11
SCARB2-222ENST00000640634 CPS1P31327 1500 aa15.75■□□□□ 0.11
SCARB2-222ENST00000640634 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
SCARB2-222ENST00000640634 PIK3R4Q99570 1358 aa15.74■□□□□ 0.11
SCARB2-222ENST00000640634 TRPM1Q7Z4N2 1603 aa15.74■□□□□ 0.11
SCARB2-222ENST00000640634 NKTRP30414 1462 aaKnown RBP15.74■□□□□ 0.11
SCARB2-222ENST00000640634 ROBO2Q9HCK4 1378 aa15.74■□□□□ 0.11
SCARB2-222ENST00000640634 YTHDC2Q9H6S0 1430 aaKnown RBP15.73■□□□□ 0.11
SCARB2-222ENST00000640634 TMEM94Q12767 1356 aa15.72■□□□□ 0.11
SCARB2-222ENST00000640634 CERKQ8TCT0 537 aa15.71■□□□□ 0.11
SCARB2-222ENST00000640634 FKBP8Q14318 412 aa15.71■□□□□ 0.1
SCARB2-222ENST00000640634 PROSER2Q86WR7 435 aaPredicted RBP15.71■□□□□ 0.1
SCARB2-222ENST00000640634 KIAA1210Q9ULL0 1709 aa15.71■□□□□ 0.1
SCARB2-222ENST00000640634 LRPPRCP42704 1394 aaKnown RBP15.7■□□□□ 0.1
SCARB2-222ENST00000640634 PLEKHH1Q9ULM0 1364 aa15.7■□□□□ 0.1
SCARB2-222ENST00000640634 KNDC1Q76NI1 1749 aa15.7■□□□□ 0.1
SCARB2-222ENST00000640634 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
SCARB2-222ENST00000640634 WAPLQ7Z5K2 1190 aa15.68■□□□□ 0.1
SCARB2-222ENST00000640634 TECPR2O15040 1411 aa15.68■□□□□ 0.1
SCARB2-222ENST00000640634 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
SCARB2-222ENST00000640634 NALCNQ8IZF0 1738 aa15.68■□□□□ 0.1
SCARB2-222ENST00000640634 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms