RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 NUTM2BA6NNL0 878 aaPredicted RBP11.68□□□□□ -0.54
CACNA1D-230ENST00000640483 NUTM2EB1AL46 878 aaPredicted RBP11.68□□□□□ -0.54
CACNA1D-230ENST00000640483 NUTM2AQ8IVF1 878 aaPredicted RBP11.68□□□□□ -0.54
CACNA1D-230ENST00000640483 CASKIN1Q8WXD9 1431 aa11.68□□□□□ -0.54
CACNA1D-230ENST00000640483 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
CACNA1D-230ENST00000640483 ADAMTS12P58397 1594 aa11.68□□□□□ -0.54
CACNA1D-230ENST00000640483 ANKRD50Q9ULJ7 1429 aa11.68□□□□□ -0.54
CACNA1D-230ENST00000640483 DIAPH1O60610 1272 aaKnown RBP11.67□□□□□ -0.54
CACNA1D-230ENST00000640483 NGEFQ8N5V2 710 aa11.67□□□□□ -0.54
CACNA1D-230ENST00000640483 PMFBP1Q8TBY8 1022 aa11.67□□□□□ -0.54
CACNA1D-230ENST00000640483 FGD6Q6ZV73 1430 aa11.67□□□□□ -0.54
CACNA1D-230ENST00000640483 RCAN3Q9UKA8 241 aa11.66□□□□□ -0.54
CACNA1D-230ENST00000640483 TRIM6-TRIM34B2RNG4 842 aa11.66□□□□□ -0.54
CACNA1D-230ENST00000640483 TOMM22Q9NS69 142 aa11.66□□□□□ -0.54
CACNA1D-230ENST00000640483 NRDCO43847 1150 aa11.66□□□□□ -0.54
CACNA1D-230ENST00000640483 DDX58O95786 925 aaKnown RBP11.66□□□□□ -0.54
CACNA1D-230ENST00000640483 B4GALNT3Q6L9W6 998 aa11.66□□□□□ -0.54
CACNA1D-230ENST00000640483 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
CACNA1D-230ENST00000640483 EIF2S2P20042 333 aaKnown RBP11.65□□□□□ -0.54
CACNA1D-230ENST00000640483 NLRP6P59044 892 aa11.65□□□□□ -0.54
CACNA1D-230ENST00000640483 SCAPERQ9BY12 1400 aa11.65□□□□□ -0.54
CACNA1D-230ENST00000640483 MARCH6O60337 910 aa11.65□□□□□ -0.54
CACNA1D-230ENST00000640483 MYBBP1AQ9BQG0 1328 aaKnown RBP11.65□□□□□ -0.55
CACNA1D-230ENST00000640483 RBM33Q96EV2 1170 aaKnown RBP11.64□□□□□ -0.55
CACNA1D-230ENST00000640483 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
CACNA1D-230ENST00000640483 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
CACNA1D-230ENST00000640483 USP47Q96K76 1375 aa11.64□□□□□ -0.55
CACNA1D-230ENST00000640483 PLCB2Q00722 1185 aa11.64□□□□□ -0.55
CACNA1D-230ENST00000640483 NCOA2Q15596 1464 aa11.64□□□□□ -0.55
CACNA1D-230ENST00000640483 ABTB2Q8N961 1025 aa11.63□□□□□ -0.55
CACNA1D-230ENST00000640483 RRP7AQ9Y3A4 280 aaKnown RBP11.63□□□□□ -0.55
CACNA1D-230ENST00000640483 VPS37DQ86XT2 251 aa11.63□□□□□ -0.55
CACNA1D-230ENST00000640483 RAPGEF3O95398 923 aa11.63□□□□□ -0.55
CACNA1D-230ENST00000640483 DMRT2Q9Y5R5 561 aa11.63□□□□□ -0.55
CACNA1D-230ENST00000640483 HTATSF1O43719 755 aaKnown RBP11.63□□□□□ -0.55
CACNA1D-230ENST00000640483 C16orf71Q8IYS4 520 aaPredicted RBP11.63□□□□□ -0.55
CACNA1D-230ENST00000640483 HECW1Q76N89 1606 aa11.63□□□□□ -0.55
CACNA1D-230ENST00000640483 ABCA5Q8WWZ7 1642 aa11.63□□□□□ -0.55
CACNA1D-230ENST00000640483 LRRFIP1Q32MZ4 808 aaKnown RBP11.62□□□□□ -0.55
CACNA1D-230ENST00000640483 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
CACNA1D-230ENST00000640483 C9orf78Q9NZ63 289 aaPredicted RBP11.62□□□□□ -0.55
CACNA1D-230ENST00000640483 TARBP1Q13395 1621 aaKnown RBP11.62□□□□□ -0.55
CACNA1D-230ENST00000640483 SMG6Q86US8 1419 aaKnown RBP11.62□□□□□ -0.55
CACNA1D-230ENST00000640483 STRN4Q9NRL3 753 aa11.62□□□□□ -0.55
CACNA1D-230ENST00000640483 SLC52A1Q9NWF4 448 aa11.62□□□□□ -0.55
CACNA1D-230ENST00000640483 KIAA2012Q0VF49 1180 aa11.61□□□□□ -0.55
CACNA1D-230ENST00000640483 NUP160Q12769 1436 aa11.61□□□□□ -0.55
CACNA1D-230ENST00000640483 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
CACNA1D-230ENST00000640483 USP35Q9P2H5 1018 aa11.61□□□□□ -0.55
CACNA1D-230ENST00000640483 CHAF1AQ13111 956 aaPredicted RBP11.61□□□□□ -0.55
CACNA1D-230ENST00000640483 CABP2Q9NPB3 220 aa11.6□□□□□ -0.55
CACNA1D-230ENST00000640483 ELL2O00472 640 aaPredicted RBP11.6□□□□□ -0.55
CACNA1D-230ENST00000640483 TMEM132EQ6IEE7 984 aa11.6□□□□□ -0.55
CACNA1D-230ENST00000640483 CCDC34Q96HJ3 373 aa11.6□□□□□ -0.55
CACNA1D-230ENST00000640483 RAD21O60216 631 aa11.6□□□□□ -0.55
CACNA1D-230ENST00000640483 CLUAP1Q96AJ1 413 aa11.6□□□□□ -0.55
CACNA1D-230ENST00000640483 PBRM1Q86U86 1689 aa11.6□□□□□ -0.55
CACNA1D-230ENST00000640483 LRRC9Q6ZRR7 1453 aa11.59□□□□□ -0.55
CACNA1D-230ENST00000640483 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
CACNA1D-230ENST00000640483 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
CACNA1D-230ENST00000640483 RASSF8Q8NHQ8 419 aa11.58□□□□□ -0.56
CACNA1D-230ENST00000640483 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
CACNA1D-230ENST00000640483 EHBP1L1Q8N3D4 1523 aa11.57□□□□□ -0.56
CACNA1D-230ENST00000640483 C9orf84Q5VXU9 1444 aa11.57□□□□□ -0.56
CACNA1D-230ENST00000640483 PLEKHO1Q53GL0 409 aaPredicted RBP11.57□□□□□ -0.56
CACNA1D-230ENST00000640483 TSPYL4Q9UJ04 414 aa11.57□□□□□ -0.56
CACNA1D-230ENST00000640483 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
CACNA1D-230ENST00000640483 RIPK4P57078 832 aa11.56□□□□□ -0.56
CACNA1D-230ENST00000640483 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
CACNA1D-230ENST00000640483 E9PSI1 815 aa11.56□□□□□ -0.56
CACNA1D-230ENST00000640483 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
CACNA1D-230ENST00000640483 UGGT2Q9NYU1 1516 aa11.56□□□□□ -0.56
CACNA1D-230ENST00000640483 TOM1L2Q6ZVM7 507 aa11.56□□□□□ -0.56
CACNA1D-230ENST00000640483 PRAM1Q96QH2 718 aa11.56□□□□□ -0.56
CACNA1D-230ENST00000640483 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
CACNA1D-230ENST00000640483 WWC2Q6AWC2 1192 aa11.55□□□□□ -0.56
CACNA1D-230ENST00000640483 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
CACNA1D-230ENST00000640483 KIF3AQ9Y496 699 aa11.55□□□□□ -0.56
CACNA1D-230ENST00000640483 CHMP4CQ96CF2 233 aa11.55□□□□□ -0.56
CACNA1D-230ENST00000640483 GGNBP2Q9H3C7 697 aa11.55□□□□□ -0.56
CACNA1D-230ENST00000640483 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
CACNA1D-230ENST00000640483 KIF6Q6ZMV9 814 aa11.54□□□□□ -0.56
CACNA1D-230ENST00000640483 ZKSCAN2Q63HK3 967 aa11.54□□□□□ -0.56
CACNA1D-230ENST00000640483 AKAP17AQ02040 695 aaKnown RBP11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 HFM1A2PYH4 1435 aa11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 GNAI1P63096 354 aa11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 FKBP5Q13451 457 aaPredicted RBP11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 SYNE3Q6ZMZ3 975 aa11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 SLC26A8Q96RN1 970 aa11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 RPGRIP1LQ68CZ1 1315 aa11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 ROCK1Q13464 1354 aa11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 GAS2L2Q8NHY3 880 aa11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 CFAP70Q5T0N1 1121 aa11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 API5Q9BZZ5 524 aaKnown RBP11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 PRDM11Q9NQV5 511 aa11.53□□□□□ -0.56
CACNA1D-230ENST00000640483 HMOX1P09601 288 aa11.52□□□□□ -0.56
CACNA1D-230ENST00000640483 G3BP1Q13283 466 aaKnown RBP eCLIP11.52□□□□□ -0.57
CACNA1D-230ENST00000640483 ARAP1Q96P48 1450 aa11.52□□□□□ -0.57
CACNA1D-230ENST00000640483 CEP89Q96ST8 783 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms