RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 SPATA31E1Q6ZUB1 1445 aa22.11■■□□□ 1.13
PAX6-268ENST00000640287 LTKP29376 864 aa22.11■■□□□ 1.13
PAX6-268ENST00000640287 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.11■■□□□ 1.13
PAX6-268ENST00000640287 CCER1Q8TC90 406 aaPredicted RBP22.11■■□□□ 1.13
PAX6-268ENST00000640287 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
PAX6-268ENST00000640287 SIN3AQ96ST3 1273 aa22.1■■□□□ 1.13
PAX6-268ENST00000640287 ZFYVE9O95405 1425 aa22.1■■□□□ 1.13
PAX6-268ENST00000640287 BCANQ96GW7 911 aa22.09■■□□□ 1.13
PAX6-268ENST00000640287 POLR1AO95602 1720 aaPredicted RBP22.09■■□□□ 1.13
PAX6-268ENST00000640287 STRCQ7RTU9 1775 aa22.09■■□□□ 1.13
PAX6-268ENST00000640287 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
PAX6-268ENST00000640287 DMRT2Q9Y5R5 561 aa22.08■■□□□ 1.12
PAX6-268ENST00000640287 RPGRIP1LQ68CZ1 1315 aa22.08■■□□□ 1.12
PAX6-268ENST00000640287 NEURL4Q96JN8 1562 aa22.06■■□□□ 1.12
PAX6-268ENST00000640287 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
PAX6-268ENST00000640287 NEXMIFQ5QGS0 1516 aa22.06■■□□□ 1.12
PAX6-268ENST00000640287 MED14O60244 1454 aa22.03■■□□□ 1.12
PAX6-268ENST00000640287 VGFO15240 615 aaPredicted RBP22.03■■□□□ 1.12
PAX6-268ENST00000640287 IQGAP1P46940 1657 aa22.02■■□□□ 1.11
PAX6-268ENST00000640287 PLEKHG1Q9ULL1 1385 aa22.01■■□□□ 1.11
PAX6-268ENST00000640287 CLSPNQ9HAW4 1339 aa22■■□□□ 1.11
PAX6-268ENST00000640287 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
PAX6-268ENST00000640287 PPLO60437 1756 aa22■■□□□ 1.11
PAX6-268ENST00000640287 KDM2AQ9Y2K7 1162 aa21.99■■□□□ 1.11
PAX6-268ENST00000640287 SLC26A8Q96RN1 970 aa21.96■■□□□ 1.11
PAX6-268ENST00000640287 TONSLQ96HA7 1378 aa21.96■■□□□ 1.11
PAX6-268ENST00000640287 IFT172Q9UG01 1749 aa21.96■■□□□ 1.11
PAX6-268ENST00000640287 ADGRF5Q8IZF2 1346 aa21.96■■□□□ 1.11
PAX6-268ENST00000640287 L3MBTL2Q969R5 705 aa21.94■■□□□ 1.1
PAX6-268ENST00000640287 MYOM2P54296 1465 aa21.94■■□□□ 1.1
PAX6-268ENST00000640287 STAC3Q96MF2 364 aa21.91■■□□□ 1.1
PAX6-268ENST00000640287 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
PAX6-268ENST00000640287 ADAMTS13Q76LX8 1427 aa21.9■■□□□ 1.1
PAX6-268ENST00000640287 DIP2AQ14689 1571 aa21.89■■□□□ 1.09
PAX6-268ENST00000640287 PIK3C2GO75747 1445 aa21.89■■□□□ 1.09
PAX6-268ENST00000640287 TBX22Q9Y458 520 aa21.89■■□□□ 1.09
PAX6-268ENST00000640287 NRXN3Q9Y4C0 1643 aa21.88■■□□□ 1.09
PAX6-268ENST00000640287 NRXN1Q9ULB1 1477 aa21.87■■□□□ 1.09
PAX6-268ENST00000640287 ZNF335Q9H4Z2 1342 aaPredicted RBP21.87■■□□□ 1.09
PAX6-268ENST00000640287 ALKQ9UM73 1620 aa21.85■■□□□ 1.09
PAX6-268ENST00000640287 CFAP70Q5T0N1 1121 aa21.83■■□□□ 1.08
PAX6-268ENST00000640287 PRAG1Q86YV5 1406 aa21.82■■□□□ 1.08
PAX6-268ENST00000640287 METP08581 1390 aa21.82■■□□□ 1.08
PAX6-268ENST00000640287 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
PAX6-268ENST00000640287 PIK3R4Q99570 1358 aa21.81■■□□□ 1.08
PAX6-268ENST00000640287 KCNA6P17658 529 aa21.8■■□□□ 1.08
PAX6-268ENST00000640287 TIMELESSQ9UNS1 1208 aa21.79■■□□□ 1.08
PAX6-268ENST00000640287 LAMC1P11047 1609 aa21.79■■□□□ 1.08
PAX6-268ENST00000640287 TMEM132EQ6IEE7 984 aa21.78■■□□□ 1.08
PAX6-268ENST00000640287 AMOTL2Q9Y2J4 779 aa21.77■■□□□ 1.08
PAX6-268ENST00000640287 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
PAX6-268ENST00000640287 PTPRUQ92729 1446 aa21.76■■□□□ 1.07
PAX6-268ENST00000640287 STK26Q9P289 416 aa21.75■■□□□ 1.07
PAX6-268ENST00000640287 CPS1P31327 1500 aa21.75■■□□□ 1.07
PAX6-268ENST00000640287 NWD1Q149M9 1564 aa21.74■■□□□ 1.07
PAX6-268ENST00000640287 CHD2O14647 1828 aaKnown RBP21.74■■□□□ 1.07
PAX6-268ENST00000640287 STRCP1A6NGW2 1772 aa21.73■■□□□ 1.07
PAX6-268ENST00000640287 LTBP4Q8N2S1 1624 aa21.73■■□□□ 1.07
PAX6-268ENST00000640287 ASXL1Q8IXJ9 1541 aa21.72■■□□□ 1.07
PAX6-268ENST00000640287 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
PAX6-268ENST00000640287 PROSER2Q86WR7 435 aaPredicted RBP21.72■■□□□ 1.07
PAX6-268ENST00000640287 NKTRP30414 1462 aaKnown RBP21.72■■□□□ 1.07
PAX6-268ENST00000640287 YTHDC2Q9H6S0 1430 aaKnown RBP21.71■■□□□ 1.07
PAX6-268ENST00000640287 LRPPRCP42704 1394 aaKnown RBP21.71■■□□□ 1.07
PAX6-268ENST00000640287 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
PAX6-268ENST00000640287 KIAA1210Q9ULL0 1709 aa21.7■■□□□ 1.06
PAX6-268ENST00000640287 NBPF1Q3BBV0 1214 aa21.7■■□□□ 1.06
PAX6-268ENST00000640287 ADGRB1O14514 1584 aa21.69■■□□□ 1.06
PAX6-268ENST00000640287 XRN1Q8IZH2 1706 aaKnown RBP21.69■■□□□ 1.06
PAX6-268ENST00000640287 RBM33Q96EV2 1170 aaKnown RBP21.69■■□□□ 1.06
PAX6-268ENST00000640287 TRPM1Q7Z4N2 1603 aa21.68■■□□□ 1.06
PAX6-268ENST00000640287 LRRC7Q96NW7 1537 aa21.67■■□□□ 1.06
PAX6-268ENST00000640287 TMEM94Q12767 1356 aa21.67■■□□□ 1.06
PAX6-268ENST00000640287 C14orf37Q86TY3 774 aa21.66■■□□□ 1.06
PAX6-268ENST00000640287 TRAK1Q9UPV9 953 aa21.66■■□□□ 1.06
PAX6-268ENST00000640287 ABCC11Q96J66 1382 aa21.66■■□□□ 1.06
PAX6-268ENST00000640287 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
PAX6-268ENST00000640287 CERKQ8TCT0 537 aa21.65■■□□□ 1.06
PAX6-268ENST00000640287 ROBO2Q9HCK4 1378 aa21.65■■□□□ 1.06
PAX6-268ENST00000640287 RALGAPBQ86X10 1494 aa21.64■■□□□ 1.05
PAX6-268ENST00000640287 TECPR2O15040 1411 aa21.63■■□□□ 1.05
PAX6-268ENST00000640287 CARD11Q9BXL7 1154 aa21.63■■□□□ 1.05
PAX6-268ENST00000640287 KNDC1Q76NI1 1749 aa21.62■■□□□ 1.05
PAX6-268ENST00000640287 POGKQ9P215 609 aa21.62■■□□□ 1.05
PAX6-268ENST00000640287 WAPLQ7Z5K2 1190 aa21.61■■□□□ 1.05
PAX6-268ENST00000640287 PRAM1Q96QH2 718 aa21.6■■□□□ 1.05
PAX6-268ENST00000640287 SAFB2Q14151 953 aaKnown RBP eCLIP21.59■■□□□ 1.05
PAX6-268ENST00000640287 DLC1Q96QB1 1528 aa21.58■■□□□ 1.05
PAX6-268ENST00000640287 FAM135BQ49AJ0 1406 aa21.58■■□□□ 1.04
PAX6-268ENST00000640287 MSH6P52701 1360 aa21.58■■□□□ 1.04
PAX6-268ENST00000640287 GPRASP1Q5JY77 1395 aa21.58■■□□□ 1.04
PAX6-268ENST00000640287 PLEKHH1Q9ULM0 1364 aa21.58■■□□□ 1.04
PAX6-268ENST00000640287 SIRT1Q96EB6 747 aa21.58■■□□□ 1.04
PAX6-268ENST00000640287 NCOA3Q9Y6Q9 1424 aa21.57■■□□□ 1.04
PAX6-268ENST00000640287 IQSEC2Q5JU85 1478 aa21.56■■□□□ 1.04
PAX6-268ENST00000640287 EIF3AQ14152 1382 aaKnown RBP21.55■■□□□ 1.04
PAX6-268ENST00000640287 XIRP1Q702N8 1843 aaKnown RBP21.55■■□□□ 1.04
PAX6-268ENST00000640287 C19orf44Q9H6X5 657 aa21.54■■□□□ 1.04
PAX6-268ENST00000640287 ARHGEF28Q8N1W1 1705 aaKnown RBP21.54■■□□□ 1.04
PAX6-268ENST00000640287 ADGRL3Q9HAR2 1447 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms