RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 PRKRIP1Q9H875 184 aaPredicted RBP18.13■□□□□ 0.49
HNRNPU-226ENST00000640218 APAF1O14727 1248 aa18.13■□□□□ 0.49
HNRNPU-226ENST00000640218 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
HNRNPU-226ENST00000640218 DDX11L8A8MPP1 907 aa18.12■□□□□ 0.49
HNRNPU-226ENST00000640218 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
HNRNPU-226ENST00000640218 FAM69CQ0P6D2 419 aa18.12■□□□□ 0.49
HNRNPU-226ENST00000640218 PDE4AP27815 886 aa18.11■□□□□ 0.49
HNRNPU-226ENST00000640218 NEXNQ0ZGT2 675 aa18.11■□□□□ 0.49
HNRNPU-226ENST00000640218 TPD52L1Q16890 204 aaPredicted RBP18.11■□□□□ 0.49
HNRNPU-226ENST00000640218 TPM3P06753 285 aa18.11■□□□□ 0.49
HNRNPU-226ENST00000640218 AKAP17AQ02040 695 aaKnown RBP18.11■□□□□ 0.49
HNRNPU-226ENST00000640218 PTPRGP23470 1445 aa18.11■□□□□ 0.49
HNRNPU-226ENST00000640218 CNKSR2Q8WXI2 1034 aa18.11■□□□□ 0.49
HNRNPU-226ENST00000640218 DIAPH3Q9NSV4 1193 aa18.11■□□□□ 0.49
HNRNPU-226ENST00000640218 GOLGA6L1Q8N7Z2 621 aa18.1■□□□□ 0.49
HNRNPU-226ENST00000640218 CEP89Q96ST8 783 aa18.09■□□□□ 0.49
HNRNPU-226ENST00000640218 DIAPH1O60610 1272 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-226ENST00000640218 DDX49Q9Y6V7 483 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-226ENST00000640218 MCTP1Q6DN14 999 aa18.09■□□□□ 0.49
HNRNPU-226ENST00000640218 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-226ENST00000640218 RIPK4P57078 832 aa18.07■□□□□ 0.48
HNRNPU-226ENST00000640218 SYNE3Q6ZMZ3 975 aa18.07■□□□□ 0.48
HNRNPU-226ENST00000640218 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
HNRNPU-226ENST00000640218 ZBED9Q6R2W3 1325 aa18.06■□□□□ 0.48
HNRNPU-226ENST00000640218 PSME1Q06323 249 aa18.06■□□□□ 0.48
HNRNPU-226ENST00000640218 GOLGA6L19H0YKK7 550 aa18.06■□□□□ 0.48
HNRNPU-226ENST00000640218 ATP6V1DQ9Y5K8 247 aa18.06■□□□□ 0.48
HNRNPU-226ENST00000640218 LRRFIP1Q32MZ4 808 aaKnown RBP18.05■□□□□ 0.48
HNRNPU-226ENST00000640218 RUFY2Q8WXA3 655 aa18.05■□□□□ 0.48
HNRNPU-226ENST00000640218 CHMP4CQ96CF2 233 aa18.04■□□□□ 0.48
HNRNPU-226ENST00000640218 DDX19BQ9UMR2 479 aa18.04■□□□□ 0.48
HNRNPU-226ENST00000640218 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
HNRNPU-226ENST00000640218 IFIT2P09913 472 aaKnown RBP18.04■□□□□ 0.48
HNRNPU-226ENST00000640218 BECN2A8MW95 431 aa18.04■□□□□ 0.48
HNRNPU-226ENST00000640218 APPP05067 770 aa18.04■□□□□ 0.48
HNRNPU-226ENST00000640218 NOL10Q9BSC4 688 aaKnown RBP18.04■□□□□ 0.48
HNRNPU-226ENST00000640218 TSR1Q2NL82 804 aaKnown RBP18.03■□□□□ 0.48
HNRNPU-226ENST00000640218 ANO2Q9NQ90 1003 aa18.03■□□□□ 0.48
HNRNPU-226ENST00000640218 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
HNRNPU-226ENST00000640218 USP35Q9P2H5 1018 aa18.02■□□□□ 0.48
HNRNPU-226ENST00000640218 AMOTL1Q8IY63 956 aa18.02■□□□□ 0.48
HNRNPU-226ENST00000640218 DZIP1LQ8IYY4 767 aaKnown RBP18.02■□□□□ 0.48
HNRNPU-226ENST00000640218 CTDP1Q9Y5B0 961 aaPredicted RBP18.02■□□□□ 0.47
HNRNPU-226ENST00000640218 FKBP5Q13451 457 aaPredicted RBP18.01■□□□□ 0.47
HNRNPU-226ENST00000640218 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
HNRNPU-226ENST00000640218 ZKSCAN1P17029 563 aaPredicted RBP18.01■□□□□ 0.47
HNRNPU-226ENST00000640218 REC8O95072 547 aa18.01■□□□□ 0.47
HNRNPU-226ENST00000640218 CPLX2Q6PUV4 134 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-226ENST00000640218 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-226ENST00000640218 TRIM34Q9BYJ4 488 aa18.01■□□□□ 0.47
HNRNPU-226ENST00000640218 TRIM29Q14134 588 aa18■□□□□ 0.47
HNRNPU-226ENST00000640218 API5Q9BZZ5 524 aaKnown RBP18■□□□□ 0.47
HNRNPU-226ENST00000640218 ATF3P18847 181 aa18■□□□□ 0.47
HNRNPU-226ENST00000640218 TNNT3P45378 269 aaPredicted RBP18■□□□□ 0.47
HNRNPU-226ENST00000640218 SKOR2Q2VWA4 1001 aaPredicted RBP18■□□□□ 0.47
HNRNPU-226ENST00000640218 VPS37DQ86XT2 251 aa18■□□□□ 0.47
HNRNPU-226ENST00000640218 TPM2P07951 284 aa17.99■□□□□ 0.47
HNRNPU-226ENST00000640218 CCAR2Q8N163 923 aaKnown RBP17.99■□□□□ 0.47
HNRNPU-226ENST00000640218 HMOX1P09601 288 aa17.99■□□□□ 0.47
HNRNPU-226ENST00000640218 G3BP1Q13283 466 aaKnown RBP eCLIP17.98■□□□□ 0.472e-8■■■□□ 15.2
HNRNPU-226ENST00000640218 RUNDC1Q96C34 613 aa17.98■□□□□ 0.47
HNRNPU-226ENST00000640218 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
HNRNPU-226ENST00000640218 CPLX1O14810 134 aa17.97■□□□□ 0.47
HNRNPU-226ENST00000640218 TPM1P09493 284 aa17.97■□□□□ 0.47
HNRNPU-226ENST00000640218 TCEAL9Q9UHQ7 104 aa17.97■□□□□ 0.47
HNRNPU-226ENST00000640218 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
HNRNPU-226ENST00000640218 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
HNRNPU-226ENST00000640218 ROCK1Q13464 1354 aa17.96■□□□□ 0.47
HNRNPU-226ENST00000640218 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.96■□□□□ 0.47
HNRNPU-226ENST00000640218 DHX16O60231 1041 aaKnown RBP17.95■□□□□ 0.46
HNRNPU-226ENST00000640218 TRDNQ13061 729 aa17.95■□□□□ 0.46
HNRNPU-226ENST00000640218 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.94■□□□□ 0.46
HNRNPU-226ENST00000640218 PCMTD1Q96MG8 357 aaPredicted RBP17.94■□□□□ 0.46
HNRNPU-226ENST00000640218 GSE1Q14687 1217 aa17.94■□□□□ 0.46
HNRNPU-226ENST00000640218 RNF20Q5VTR2 975 aa17.94■□□□□ 0.46
HNRNPU-226ENST00000640218 NFXL1Q6ZNB6 911 aa17.94■□□□□ 0.46
HNRNPU-226ENST00000640218 MYOM3Q5VTT5 1437 aa17.93■□□□□ 0.46
HNRNPU-226ENST00000640218 ZNF644Q9H582 1327 aaPredicted RBP17.93■□□□□ 0.46
HNRNPU-226ENST00000640218 NUTM2GQ5VZR2 741 aa17.92■□□□□ 0.46
HNRNPU-226ENST00000640218 PAXIP1Q6ZW49 1069 aaPredicted RBP17.92■□□□□ 0.46
HNRNPU-226ENST00000640218 GNAI1P63096 354 aa17.92■□□□□ 0.46
HNRNPU-226ENST00000640218 BICD2Q8TD16 824 aa17.92■□□□□ 0.46
HNRNPU-226ENST00000640218 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
HNRNPU-226ENST00000640218 AIMP1Q12904 312 aaKnown RBP17.92■□□□□ 0.46
HNRNPU-226ENST00000640218 LNPKQ9C0E8 428 aa17.92■□□□□ 0.46
HNRNPU-226ENST00000640218 RAPGEF4Q8WZA2 1011 aa17.91■□□□□ 0.46
HNRNPU-226ENST00000640218 ZNF592Q92610 1267 aa17.91■□□□□ 0.46
HNRNPU-226ENST00000640218 CABP2Q9NPB3 220 aa17.91■□□□□ 0.46
HNRNPU-226ENST00000640218 FOSBP53539 338 aa17.91■□□□□ 0.46
HNRNPU-226ENST00000640218 RIC3Q7Z5B4 369 aa17.91■□□□□ 0.46
HNRNPU-226ENST00000640218 INTS3Q68E01 1043 aaKnown RBP17.91■□□□□ 0.46
HNRNPU-226ENST00000640218 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
HNRNPU-226ENST00000640218 VPS37CA5D8V6 355 aaPredicted RBP17.9■□□□□ 0.46
HNRNPU-226ENST00000640218 ERICH2A1L162 156 aa17.9■□□□□ 0.46
HNRNPU-226ENST00000640218 FBXO3Q9UK99 471 aa17.9■□□□□ 0.46
HNRNPU-226ENST00000640218 CCDC47Q96A33 483 aaKnown RBP17.89■□□□□ 0.45
HNRNPU-226ENST00000640218 NEUROD6Q96NK8 337 aa17.89■□□□□ 0.45
HNRNPU-226ENST00000640218 SMC3Q9UQE7 1217 aa17.88■□□□□ 0.45
HNRNPU-226ENST00000640218 TMEM132EQ6IEE7 984 aa17.88■□□□□ 0.45
HNRNPU-226ENST00000640218 KIF7Q2M1P5 1343 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms