RNA–Protein interactions for RNA: ENST00000639478.1

CACNA1H-211, Transcript of calcium voltage-gated channel subunit alpha1 H, humanhuman

TSL 5

Gene CACNA1H, Length 7,992 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1H-211ENST00000639478 RB1CC1Q8TDY2 1594 aa25.89■■□□□ 1.74
CACNA1H-211ENST00000639478 RAD21O60216 631 aa25.89■■□□□ 1.74
CACNA1H-211ENST00000639478 REC8O95072 547 aa25.89■■□□□ 1.74
CACNA1H-211ENST00000639478 CT47A1Q5JQC4 288 aaPredicted RBP25.88■■□□□ 1.73
CACNA1H-211ENST00000639478 VPS37CA5D8V6 355 aaPredicted RBP25.87■■□□□ 1.73
CACNA1H-211ENST00000639478 NFKBIBQ15653 356 aa25.86■■□□□ 1.73
CACNA1H-211ENST00000639478 SKIDA1Q1XH10 827 aa25.86■■□□□ 1.73
CACNA1H-211ENST00000639478 TERF2IPQ9NYB0 399 aa25.86■■□□□ 1.73
CACNA1H-211ENST00000639478 CHMP4CQ96CF2 233 aa25.85■■□□□ 1.73
CACNA1H-211ENST00000639478 TTLL5Q6EMB2 1281 aa25.85■■□□□ 1.73
CACNA1H-211ENST00000639478 MTERF4Q7Z6M4 381 aaKnown RBP25.85■■□□□ 1.73
CACNA1H-211ENST00000639478 GTF2E1P29083 439 aaPredicted RBP25.85■■□□□ 1.73
CACNA1H-211ENST00000639478 RBM10P98175 930 aaKnown RBP25.85■■□□□ 1.73
CACNA1H-211ENST00000639478 NUP155O75694 1391 aa25.85■■□□□ 1.73
CACNA1H-211ENST00000639478 CGNL1Q0VF96 1302 aa25.85■■□□□ 1.73
CACNA1H-211ENST00000639478 AMPHP49418 695 aa25.85■■□□□ 1.73
CACNA1H-211ENST00000639478 DCTN1Q14203 1278 aa25.84■■□□□ 1.73
CACNA1H-211ENST00000639478 MYBBP1AQ9BQG0 1328 aaKnown RBP25.84■■□□□ 1.73
CACNA1H-211ENST00000639478 ZKSCAN2Q63HK3 967 aa25.83■■□□□ 1.73
CACNA1H-211ENST00000639478 ZKSCAN1P17029 563 aaPredicted RBP25.83■■□□□ 1.73
CACNA1H-211ENST00000639478 CPLX2Q6PUV4 134 aaKnown RBP25.82■■□□□ 1.72
CACNA1H-211ENST00000639478 ZBED9Q6R2W3 1325 aa25.82■■□□□ 1.72
CACNA1H-211ENST00000639478 CCDC66A2RUB6 948 aa25.82■■□□□ 1.72
CACNA1H-211ENST00000639478 PDILTQ8N807 584 aa25.82■■□□□ 1.72
CACNA1H-211ENST00000639478 RUFY2Q8WXA3 655 aa25.82■■□□□ 1.72
CACNA1H-211ENST00000639478 CCDC39Q9UFE4 941 aa25.82■■□□□ 1.72
CACNA1H-211ENST00000639478 CPLX1O14810 134 aa25.81■■□□□ 1.72
CACNA1H-211ENST00000639478 HSP90AB3PQ58FF7 597 aa25.81■■□□□ 1.72
CACNA1H-211ENST00000639478 CAGE1Q8TC20 777 aa25.81■■□□□ 1.72
CACNA1H-211ENST00000639478 CCDC47Q96A33 483 aaKnown RBP25.81■■□□□ 1.72
CACNA1H-211ENST00000639478 SMC3Q9UQE7 1217 aa25.8■■□□□ 1.72
CACNA1H-211ENST00000639478 ZFYVE27Q5T4F4 411 aa25.8■■□□□ 1.72
CACNA1H-211ENST00000639478 RNF214Q8ND24 703 aa25.8■■□□□ 1.72
CACNA1H-211ENST00000639478 KANK4Q5T7N3 995 aaPredicted RBP25.79■■□□□ 1.72
CACNA1H-211ENST00000639478 NUCB2P80303 420 aa25.78■■□□□ 1.72
CACNA1H-211ENST00000639478 HSP90AB2PQ58FF8 381 aa25.78■■□□□ 1.72
CACNA1H-211ENST00000639478 NUTM2DQ5VT03 806 aaPredicted RBP25.78■■□□□ 1.72
CACNA1H-211ENST00000639478 E9PSI1 815 aa25.78■■□□□ 1.72
CACNA1H-211ENST00000639478 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
CACNA1H-211ENST00000639478 NGEFQ8N5V2 710 aa25.77■■□□□ 1.72
CACNA1H-211ENST00000639478 VPS8Q8N3P4 1428 aa25.76■■□□□ 1.71
CACNA1H-211ENST00000639478 L3MBTL2Q969R5 705 aa25.76■■□□□ 1.71
CACNA1H-211ENST00000639478 CTDP1Q9Y5B0 961 aaPredicted RBP25.76■■□□□ 1.71
CACNA1H-211ENST00000639478 BRPF3Q9ULD4 1205 aa25.75■■□□□ 1.71
CACNA1H-211ENST00000639478 C9orf78Q9NZ63 289 aaPredicted RBP25.75■■□□□ 1.71
CACNA1H-211ENST00000639478 NUTM2FA1L443 756 aa25.75■■□□□ 1.71
CACNA1H-211ENST00000639478 LRRFIP1Q32MZ4 808 aaKnown RBP25.75■■□□□ 1.71
CACNA1H-211ENST00000639478 NECTIN2Q92692 538 aa25.75■■□□□ 1.71
CACNA1H-211ENST00000639478 PANK3Q9H999 370 aa25.75■■□□□ 1.71
CACNA1H-211ENST00000639478 EPS15P42566 896 aa25.74■■□□□ 1.71
CACNA1H-211ENST00000639478 MRE11P49959 708 aa25.74■■□□□ 1.71
CACNA1H-211ENST00000639478 LEKR1Q6ZMV7 388 aa25.74■■□□□ 1.71
CACNA1H-211ENST00000639478 NFXL1Q6ZNB6 911 aa25.74■■□□□ 1.71
CACNA1H-211ENST00000639478 NAT10Q9H0A0 1025 aaKnown RBP25.74■■□□□ 1.71
CACNA1H-211ENST00000639478 TRIM34Q9BYJ4 488 aa25.74■■□□□ 1.71
CACNA1H-211ENST00000639478 C22orf23Q9BZE7 217 aa25.73■■□□□ 1.71
CACNA1H-211ENST00000639478 CCDC173Q0VFZ6 552 aa25.73■■□□□ 1.71
CACNA1H-211ENST00000639478 CCDC43Q96MW1 224 aaKnown RBP25.73■■□□□ 1.71
CACNA1H-211ENST00000639478 NGDNQ8NEJ9 315 aaKnown RBP25.72■■□□□ 1.71
CACNA1H-211ENST00000639478 IL27Q8NEV9 243 aa25.72■■□□□ 1.71
CACNA1H-211ENST00000639478 CAVIN1Q6NZI2 390 aaKnown RBP25.72■■□□□ 1.71
CACNA1H-211ENST00000639478 SOGA1O94964 1423 aa25.72■■□□□ 1.71
CACNA1H-211ENST00000639478 CCDC73Q6ZRK6 1079 aa25.71■■□□□ 1.71
CACNA1H-211ENST00000639478 OLFM4Q6UX06 510 aa25.71■■□□□ 1.71
CACNA1H-211ENST00000639478 TRDNQ13061 729 aa25.71■■□□□ 1.71
CACNA1H-211ENST00000639478 RNF20Q5VTR2 975 aa25.71■■□□□ 1.71
CACNA1H-211ENST00000639478 INTS3Q68E01 1043 aaKnown RBP25.71■■□□□ 1.71
CACNA1H-211ENST00000639478 TSPYL1Q9H0U9 437 aa25.7■■□□□ 1.71
CACNA1H-211ENST00000639478 TRAK2O60296 914 aa25.7■■□□□ 1.7
CACNA1H-211ENST00000639478 DDX19BQ9UMR2 479 aa25.7■■□□□ 1.7
CACNA1H-211ENST00000639478 ERCC6Q03468 1493 aa25.7■■□□□ 1.7
CACNA1H-211ENST00000639478 IFIT2P09913 472 aaKnown RBP25.7■■□□□ 1.7
CACNA1H-211ENST00000639478 DHX16O60231 1041 aaKnown RBP25.69■■□□□ 1.7
CACNA1H-211ENST00000639478 PODXL2Q9NZ53 605 aa25.69■■□□□ 1.7
CACNA1H-211ENST00000639478 DHX37Q8IY37 1157 aaKnown RBP25.69■■□□□ 1.7
CACNA1H-211ENST00000639478 SPC24Q8NBT2 197 aa25.69■■□□□ 1.7
CACNA1H-211ENST00000639478 TRIM5Q9C035 493 aa25.69■■□□□ 1.7
CACNA1H-211ENST00000639478 AMOTL1Q8IY63 956 aa25.68■■□□□ 1.7
CACNA1H-211ENST00000639478 FMN1Q68DA7 1419 aa25.68■■□□□ 1.7
CACNA1H-211ENST00000639478 CCDC27Q2M243 656 aa25.68■■□□□ 1.7
CACNA1H-211ENST00000639478 AXDND1Q5T1B0 1012 aaPredicted RBP25.67■■□□□ 1.7
CACNA1H-211ENST00000639478 LNPKQ9C0E8 428 aa25.67■■□□□ 1.7
CACNA1H-211ENST00000639478 MAPK8IP2Q13387 824 aaPredicted RBP25.67■■□□□ 1.7
CACNA1H-211ENST00000639478 EIF2S2P20042 333 aaKnown RBP25.66■■□□□ 1.7
CACNA1H-211ENST00000639478 ERCC4Q92889 916 aaPredicted RBP25.66■■□□□ 1.7
CACNA1H-211ENST00000639478 CUX2O14529 1486 aa25.65■■□□□ 1.7
CACNA1H-211ENST00000639478 CARMIL1Q5VZK9 1371 aa25.65■■□□□ 1.7
CACNA1H-211ENST00000639478 ERICH2A1L162 156 aa25.65■■□□□ 1.7
CACNA1H-211ENST00000639478 OFD1O75665 1012 aa25.65■■□□□ 1.7
CACNA1H-211ENST00000639478 NEFHP12036 1026 aa25.65■■□□□ 1.7
CACNA1H-211ENST00000639478 TRAK1Q9UPV9 953 aa25.65■■□□□ 1.7
CACNA1H-211ENST00000639478 ST20-MTHFSA0A0A6YYL1 179 aa25.65■■□□□ 1.7
CACNA1H-211ENST00000639478 SMC2O95347 1197 aa25.65■■□□□ 1.7
CACNA1H-211ENST00000639478 NOL10Q9BSC4 688 aaKnown RBP25.64■■□□□ 1.7
CACNA1H-211ENST00000639478 SDF4Q9BRK5 362 aa25.64■■□□□ 1.69
CACNA1H-211ENST00000639478 MYO6Q9UM54 1294 aa25.63■■□□□ 1.69
CACNA1H-211ENST00000639478 ZRSR2Q15696 482 aaKnown RBP25.63■■□□□ 1.69
CACNA1H-211ENST00000639478 C1orf141Q5JVX7 400 aa25.62■■□□□ 1.69
CACNA1H-211ENST00000639478 NEXNQ0ZGT2 675 aa25.62■■□□□ 1.69
CACNA1H-211ENST00000639478 ANKRD30AQ9BXX3 1397 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms