RNA–Protein interactions for RNA: ENST00000639092.1

ARHGEF9-238, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 4,657 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-238	ENST00000639092	CD109	Q6YHK3	1445 aa		10.71	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	CNTLN	Q9NXG0	1405 aa		10.71	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	KIF21A	Q7Z4S6	1674 aa		10.71	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	SLC4A10	Q6U841	1118 aa		10.71	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	CLUAP1	Q96AJ1	413 aa		10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	ARHGEF11	O15085	1522 aa		10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	PTMS	P20962	102 aa		10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	C1orf141	Q5JVX7	400 aa		10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	ISY1	Q9ULR0	285 aa	Known RBP	10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	CHMP3	Q9Y3E7	222 aa		10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092		E9PSI1	815 aa		10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	HTATSF1	O43719	755 aa	Known RBP	10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	TEF	Q10587	303 aa		10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	GNL2	Q13823	731 aa	Known RBP	10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	NUP160	Q12769	1436 aa		10.7	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	ITSN2	Q9NZM3	1697 aa		10.69	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	NCOA1	Q15788	1441 aa		10.69	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	GBP4	Q96PP9	640 aa		10.69	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	GTF2E1	P29083	439 aa	Predicted RBP	10.68	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	KIAA0556	O60303	1618 aa		10.68	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	TULP1	O00294	542 aa	Predicted RBP	10.68	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	ZBED9	Q6R2W3	1325 aa		10.68	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	ABCA5	Q8WWZ7	1642 aa		10.68	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	ADGRL1	O94910	1474 aa		10.67	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	DIAPH1	O60610	1272 aa	Known RBP	10.67	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	TRIM6-TRIM34	B2RNG4	842 aa		10.67	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	BRD4	O60885	1362 aa	Predicted RBP	10.66	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	KIF7	Q2M1P5	1343 aa		10.66	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	L1TD1	Q5T7N2	865 aa	Known RBP	10.66	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.66	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	EVA1C	P58658	441 aa		10.66	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	RRP7A	Q9Y3A4	280 aa	Known RBP	10.66	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	PLCH2	O75038	1416 aa		10.66	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	ZKSCAN2	Q63HK3	967 aa		10.66	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	TCOF1	Q13428	1488 aa	Known RBP	10.65	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.65	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	CCDC34	Q96HJ3	373 aa		10.65	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	EIF4G3	O43432	1585 aa	Known RBP	10.65	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	PSME1	Q06323	249 aa		10.65	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	ATP10B	O94823	1461 aa		10.65	□□□□□ -0.7
ARHGEF9-238	ENST00000639092	DENND4B	O75064	1496 aa	Predicted RBP	10.65	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	NUP153	P49790	1475 aa	Known RBP	10.64	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	NEXN	Q0ZGT2	675 aa		10.64	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	TTC5	Q8N0Z6	440 aa		10.64	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	RBM19	Q9Y4C8	960 aa	Known RBP	10.64	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	KIF3A	Q9Y496	699 aa		10.64	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	CFAP43	Q8NDM7	1665 aa		10.64	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	APAF1	O14727	1248 aa		10.63	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	AAMP	Q13685	434 aa		10.63	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	SYAP1	Q96A49	352 aa	Predicted RBP	10.63	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	FANCA	O15360	1455 aa		10.63	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	TEX14	Q8IWB6	1497 aa		10.63	□□□□□ -0.71
ARHGEF9-238	ENST00000639092		G3V3G9	751 aa		10.63	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	MFAP1	P55081	439 aa	Known RBP	10.63	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	DCAF8	Q5TAQ9	597 aa		10.63	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	DHX29	Q7Z478	1369 aa	Known RBP	10.62	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	SHANK2	Q9UPX8	1470 aa		10.62	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	ATF3	P18847	181 aa		10.62	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.62	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	API5	Q9BZZ5	524 aa	Known RBP	10.62	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	ELL2	O00472	640 aa	Predicted RBP	10.62	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	FRAT2	O75474	233 aa	Predicted RBP	10.62	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	CHMP4C	Q96CF2	233 aa		10.62	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	PBRM1	Q86U86	1689 aa		10.62	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	ERBIN	Q96RT1	1412 aa		10.61	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	SPRYD3	Q8NCJ5	442 aa		10.61	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	CHAF1A	Q13111	956 aa	Predicted RBP	10.61	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.61	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	DDX58	O95786	925 aa	Known RBP	10.61	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	DUOX2	Q9NRD8	1548 aa		10.6	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	ST18	O60284	1047 aa		10.6	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	CSPP1	Q1MSJ5	1256 aa		10.6	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	RUNDC1	Q96C34	613 aa		10.6	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	RAPGEF4	Q8WZA2	1011 aa		10.6	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	ZNF692	Q9BU19	519 aa	Predicted RBP	10.6	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	DDX19B	Q9UMR2	479 aa		10.6	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	WDR7	Q9Y4E6	1490 aa		10.59	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	ATAD2	Q6PL18	1390 aa		10.59	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	RIPK4	P57078	832 aa		10.59	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	SLK	Q9H2G2	1235 aa	Predicted RBP	10.59	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	RPRD2	Q5VT52	1461 aa	Known RBP	10.59	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	GNAI1	P63096	354 aa		10.59	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	BCL2L13	Q9BXK5	485 aa		10.59	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.59	□□□□□ -0.71
ARHGEF9-238	ENST00000639092	RRP1	P56182	461 aa	Known RBP	10.58	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	HSP90B1	P14625	803 aa	Known RBP	10.58	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	DRC7	Q8IY82	874 aa		10.58	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.58	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	KIF16B	Q96L93	1317 aa		10.58	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	ABCC2	Q92887	1545 aa		10.58	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	MSN	P26038	577 aa	Known RBP	10.58	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	SAMD9	Q5K651	1589 aa		10.58	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	CFAP70	Q5T0N1	1121 aa		10.57	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	TARBP1	Q13395	1621 aa	Known RBP	10.57	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	TXNDC2	Q86VQ3	553 aa		10.57	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	ZNF518A	Q6AHZ1	1483 aa		10.56	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	RAPGEF3	O95398	923 aa		10.56	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	TOMM22	Q9NS69	142 aa		10.56	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	ANKRD45	Q5TZF3	282 aa		10.56	□□□□□ -0.72
ARHGEF9-238	ENST00000639092	ASXL2	Q76L83	1435 aa		10.56	□□□□□ -0.72

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