RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 CDCA8Q53HL2 280 aa18.23■□□□□ 0.51
SCN8A-215ENST00000638820 KIF1BO60333 1816 aa18.21■□□□□ 0.51
SCN8A-215ENST00000638820 POGKQ9P215 609 aa18.21■□□□□ 0.51
SCN8A-215ENST00000638820 ARHGEF40Q8TER5 1519 aa18.21■□□□□ 0.51
SCN8A-215ENST00000638820 CAMSAP1Q5T5Y3 1602 aa18.2■□□□□ 0.5
SCN8A-215ENST00000638820 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
SCN8A-215ENST00000638820 TMC1Q8TDI8 760 aa18.19■□□□□ 0.5
SCN8A-215ENST00000638820 AGLP35573 1532 aa18.18■□□□□ 0.5
SCN8A-215ENST00000638820 MRS2Q9HD23 443 aa18.17■□□□□ 0.5
SCN8A-215ENST00000638820 TNRQ92752 1358 aa18.16■□□□□ 0.5
SCN8A-215ENST00000638820 C14orf93Q9H972 538 aaKnown RBP18.16■□□□□ 0.5
SCN8A-215ENST00000638820 CENPJQ9HC77 1338 aaPredicted RBP18.15■□□□□ 0.5
SCN8A-215ENST00000638820 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
SCN8A-215ENST00000638820 ERVK-7P63135 1459 aa18.15■□□□□ 0.5
SCN8A-215ENST00000638820 FAM9BQ8IZU0 186 aa18.14■□□□□ 0.5
SCN8A-215ENST00000638820 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
SCN8A-215ENST00000638820 GPRASP1Q5JY77 1395 aa18.14■□□□□ 0.49
SCN8A-215ENST00000638820 CLTCQ00610 1675 aaKnown RBP18.13■□□□□ 0.49
SCN8A-215ENST00000638820 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCN8A-215ENST00000638820 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
SCN8A-215ENST00000638820 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
SCN8A-215ENST00000638820 KNSTRNQ9Y448 316 aa18.12■□□□□ 0.49
SCN8A-215ENST00000638820 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
SCN8A-215ENST00000638820 PANK3Q9H999 370 aa18.12■□□□□ 0.49
SCN8A-215ENST00000638820 TESK2Q96S53 571 aa18.11■□□□□ 0.49
SCN8A-215ENST00000638820 ZC3H13Q5T200 1668 aaKnown RBP18.11■□□□□ 0.49
SCN8A-215ENST00000638820 CCER2I3L3R5 266 aa18.11■□□□□ 0.49
SCN8A-215ENST00000638820 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
SCN8A-215ENST00000638820 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
SCN8A-215ENST00000638820 TRPM1Q7Z4N2 1603 aa18.1■□□□□ 0.49
SCN8A-215ENST00000638820 DISP3Q9P2K9 1392 aa18.09■□□□□ 0.49
SCN8A-215ENST00000638820 BCORL1Q5H9F3 1711 aa18.09■□□□□ 0.49
SCN8A-215ENST00000638820 REREQ9P2R6 1566 aa18.09■□□□□ 0.49
SCN8A-215ENST00000638820 MINK1Q8N4C8 1332 aaPredicted RBP18.08■□□□□ 0.49
SCN8A-215ENST00000638820 ADGRB3O60242 1522 aa18.08■□□□□ 0.48
SCN8A-215ENST00000638820 SYNMO15061 1565 aa18.07■□□□□ 0.48
SCN8A-215ENST00000638820 MYOM2P54296 1465 aa18.07■□□□□ 0.48
SCN8A-215ENST00000638820 RIMS2Q9UQ26 1411 aa18.06■□□□□ 0.48
SCN8A-215ENST00000638820 THEMISQ8N1K5 641 aaPredicted RBP18.06■□□□□ 0.48
SCN8A-215ENST00000638820 MADDQ8WXG6 1647 aa18.06■□□□□ 0.48
SCN8A-215ENST00000638820 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
SCN8A-215ENST00000638820 PRAM1Q96QH2 718 aa18.05■□□□□ 0.48
SCN8A-215ENST00000638820 PREX1Q8TCU6 1659 aa18.05■□□□□ 0.48
SCN8A-215ENST00000638820 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
SCN8A-215ENST00000638820 SIGLEC1Q9BZZ2 1709 aa18.05■□□□□ 0.48
SCN8A-215ENST00000638820 MROH2AA6NES4 1674 aa18.04■□□□□ 0.48
SCN8A-215ENST00000638820 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
SCN8A-215ENST00000638820 PIK3C2GO75747 1445 aa18.02■□□□□ 0.48
SCN8A-215ENST00000638820 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.47
SCN8A-215ENST00000638820 CABP2Q9NPB3 220 aa18■□□□□ 0.47
SCN8A-215ENST00000638820 SENP3-EIF4A1A0A087X0R7 540 aa17.99■□□□□ 0.47
SCN8A-215ENST00000638820 WAPLQ7Z5K2 1190 aa17.99■□□□□ 0.47
SCN8A-215ENST00000638820 A2ML1A8K2U0 1454 aa17.98■□□□□ 0.47
SCN8A-215ENST00000638820 RALBP1Q15311 655 aa17.97■□□□□ 0.47
SCN8A-215ENST00000638820 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
SCN8A-215ENST00000638820 SLC12A5Q9H2X9 1139 aa17.97■□□□□ 0.47
SCN8A-215ENST00000638820 PIK3C2BO00750 1634 aa17.97■□□□□ 0.47
SCN8A-215ENST00000638820 TNNT2P45379 298 aaPredicted RBP17.96■□□□□ 0.47
SCN8A-215ENST00000638820 TMEM2Q9UHN6 1383 aa17.95■□□□□ 0.46
SCN8A-215ENST00000638820 NUTM2FA1L443 756 aa17.95■□□□□ 0.46
SCN8A-215ENST00000638820 NEXMIFQ5QGS0 1516 aa17.95■□□□□ 0.46
SCN8A-215ENST00000638820 NEURL4Q96JN8 1562 aa17.95■□□□□ 0.46
SCN8A-215ENST00000638820 LTKP29376 864 aa17.95■□□□□ 0.46
SCN8A-215ENST00000638820 SPATA31D1Q6ZQQ2 1576 aa17.94■□□□□ 0.46
SCN8A-215ENST00000638820 TMEM131LA2VDJ0 1609 aa17.92■□□□□ 0.46
SCN8A-215ENST00000638820 PPLO60437 1756 aa17.92■□□□□ 0.46
SCN8A-215ENST00000638820 MYO5BQ9ULV0 1848 aa17.92■□□□□ 0.46
SCN8A-215ENST00000638820 ZFYVE9O95405 1425 aa17.92■□□□□ 0.46
SCN8A-215ENST00000638820 YTHDC2Q9H6S0 1430 aaKnown RBP17.92■□□□□ 0.46
SCN8A-215ENST00000638820 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
SCN8A-215ENST00000638820 ANKLE2Q86XL3 938 aa17.91■□□□□ 0.46
SCN8A-215ENST00000638820 C14orf37Q86TY3 774 aa17.91■□□□□ 0.46
SCN8A-215ENST00000638820 SALL2Q9Y467 1007 aaPredicted RBP17.91■□□□□ 0.46
SCN8A-215ENST00000638820 NLRP13Q86W25 1043 aa17.9■□□□□ 0.46
SCN8A-215ENST00000638820 NRXN1Q9ULB1 1477 aa17.9■□□□□ 0.46
SCN8A-215ENST00000638820 CDK19Q9BWU1 502 aa17.9■□□□□ 0.46
SCN8A-215ENST00000638820 NLRP1Q9C000 1473 aa17.89■□□□□ 0.45
SCN8A-215ENST00000638820 LAMC1P11047 1609 aa17.89■□□□□ 0.45
SCN8A-215ENST00000638820 GTF3C3Q9Y5Q9 886 aa17.89■□□□□ 0.45
SCN8A-215ENST00000638820 MORC1Q86VD1 984 aa17.88■□□□□ 0.45
SCN8A-215ENST00000638820 TERF2IPQ9NYB0 399 aa17.88■□□□□ 0.45
SCN8A-215ENST00000638820 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
SCN8A-215ENST00000638820 FER1L4A9Z1Z3 1794 aa17.87■□□□□ 0.45
SCN8A-215ENST00000638820 PER1O15534 1290 aaPredicted RBP17.87■□□□□ 0.45
SCN8A-215ENST00000638820 KIAA1210Q9ULL0 1709 aa17.86■□□□□ 0.45
SCN8A-215ENST00000638820 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCN8A-215ENST00000638820 METP08581 1390 aa17.85■□□□□ 0.45
SCN8A-215ENST00000638820 AMOTL2Q9Y2J4 779 aa17.85■□□□□ 0.45
SCN8A-215ENST00000638820 IFT172Q9UG01 1749 aa17.84■□□□□ 0.45
SCN8A-215ENST00000638820 IQGAP1P46940 1657 aa17.84■□□□□ 0.45
SCN8A-215ENST00000638820 CABP1Q9NZU7 370 aa17.84■□□□□ 0.45
SCN8A-215ENST00000638820 SETBP1Q9Y6X0 1596 aa17.84■□□□□ 0.45
SCN8A-215ENST00000638820 LRPPRCP42704 1394 aaKnown RBP17.83■□□□□ 0.45
SCN8A-215ENST00000638820 SBNO2Q9Y2G9 1366 aa17.83■□□□□ 0.45
SCN8A-215ENST00000638820 ALKQ9UM73 1620 aa17.83■□□□□ 0.45
SCN8A-215ENST00000638820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.83■□□□□ 0.44
SCN8A-215ENST00000638820 POLR1AO95602 1720 aaPredicted RBP17.83■□□□□ 0.44
SCN8A-215ENST00000638820 CGNL1Q0VF96 1302 aa17.82■□□□□ 0.44
SCN8A-215ENST00000638820 ADGRB1O14514 1584 aa17.82■□□□□ 0.44
SCN8A-215ENST00000638820 RIMS1Q86UR5 1692 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms