RNA–Protein interactions for RNA: ENST00000638799.1

RTTN-213, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,943 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-213ENST00000638799 CFAP70Q5T0N1 1121 aa10.14□□□□□ -0.79
RTTN-213ENST00000638799 IFT172Q9UG01 1749 aa10.13□□□□□ -0.79
RTTN-213ENST00000638799 SYNMO15061 1565 aa10.13□□□□□ -0.79
RTTN-213ENST00000638799 NOS1P29475 1434 aa10.13□□□□□ -0.79
RTTN-213ENST00000638799 STAC3Q96MF2 364 aa10.13□□□□□ -0.79
RTTN-213ENST00000638799 IQGAP1P46940 1657 aa10.12□□□□□ -0.79
RTTN-213ENST00000638799 MYOM2P54296 1465 aa10.12□□□□□ -0.79
RTTN-213ENST00000638799 ZC3H13Q5T200 1668 aaKnown RBP10.11□□□□□ -0.79
RTTN-213ENST00000638799 NUTM2DQ5VT03 806 aaPredicted RBP10.11□□□□□ -0.79
RTTN-213ENST00000638799 ARHGAP31Q2M1Z3 1444 aa10.11□□□□□ -0.79
RTTN-213ENST00000638799 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
RTTN-213ENST00000638799 PIK3C2BO00750 1634 aa10.1□□□□□ -0.79
RTTN-213ENST00000638799 NRXN1Q9ULB1 1477 aa10.1□□□□□ -0.79
RTTN-213ENST00000638799 SCAF11Q99590 1463 aaKnown RBP10.1□□□□□ -0.79
RTTN-213ENST00000638799 IDI1Q13907 227 aa10.1□□□□□ -0.79
RTTN-213ENST00000638799 PRKCSHP14314 528 aaPredicted RBP10.1□□□□□ -0.79
RTTN-213ENST00000638799 MLECQ14165 292 aa10.1□□□□□ -0.79
RTTN-213ENST00000638799 FKBP8Q14318 412 aa10.1□□□□□ -0.79
RTTN-213ENST00000638799 MRS2Q9HD23 443 aa10.1□□□□□ -0.79
RTTN-213ENST00000638799 PPLO60437 1756 aa10.09□□□□□ -0.79
RTTN-213ENST00000638799 KIAA1210Q9ULL0 1709 aa10.09□□□□□ -0.79
RTTN-213ENST00000638799 TMF1P82094 1093 aa10.09□□□□□ -0.79
RTTN-213ENST00000638799 PREX1Q8TCU6 1659 aa10.08□□□□□ -0.8
RTTN-213ENST00000638799 FAM9BQ8IZU0 186 aa10.08□□□□□ -0.8
RTTN-213ENST00000638799 REREQ9P2R6 1566 aa10.08□□□□□ -0.8
RTTN-213ENST00000638799 SENP3Q9H4L4 574 aaPredicted RBP10.08□□□□□ -0.8
RTTN-213ENST00000638799 AGLP35573 1532 aa10.07□□□□□ -0.8
RTTN-213ENST00000638799 PIK3C2GO75747 1445 aa10.07□□□□□ -0.8
RTTN-213ENST00000638799 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
RTTN-213ENST00000638799 HNRNPUQ00839 825 aaKnown RBP eCLIP10.07□□□□□ -0.8
RTTN-213ENST00000638799 ARHGEF40Q8TER5 1519 aa10.06□□□□□ -0.8
RTTN-213ENST00000638799 CLTCQ00610 1675 aaKnown RBP10.06□□□□□ -0.8
RTTN-213ENST00000638799 MYO5BQ9ULV0 1848 aa10.06□□□□□ -0.8
RTTN-213ENST00000638799 TMEM132EQ6IEE7 984 aa10.06□□□□□ -0.8
RTTN-213ENST00000638799 PANK3Q9H999 370 aa10.06□□□□□ -0.8
RTTN-213ENST00000638799 SUPT16HQ9Y5B9 1047 aaKnown RBP10.06□□□□□ -0.8
RTTN-213ENST00000638799 NEXMIFQ5QGS0 1516 aa10.06□□□□□ -0.8
RTTN-213ENST00000638799 RPGRIP1LQ68CZ1 1315 aa10.06□□□□□ -0.8
RTTN-213ENST00000638799 C14orf93Q9H972 538 aaKnown RBP10.05□□□□□ -0.8
RTTN-213ENST00000638799 SLC52A1Q9NWF4 448 aa10.05□□□□□ -0.8
RTTN-213ENST00000638799 ERVK-7P63135 1459 aa10.04□□□□□ -0.8
RTTN-213ENST00000638799 EIF3AQ14152 1382 aaKnown RBP10.04□□□□□ -0.8
RTTN-213ENST00000638799 TRAK1Q9UPV9 953 aa10.04□□□□□ -0.8
RTTN-213ENST00000638799 TMEM131LA2VDJ0 1609 aa10.04□□□□□ -0.8
RTTN-213ENST00000638799 ADGRB1O14514 1584 aa10.03□□□□□ -0.8
RTTN-213ENST00000638799 DAXXQ9UER7 740 aaPredicted RBP10.02□□□□□ -0.8
RTTN-213ENST00000638799 SETBP1Q9Y6X0 1596 aa10.02□□□□□ -0.8
RTTN-213ENST00000638799 VGFO15240 615 aaPredicted RBP10.02□□□□□ -0.81
RTTN-213ENST00000638799 CC2D1BQ5T0F9 858 aaKnown RBP10.02□□□□□ -0.81
RTTN-213ENST00000638799 PPP6R1Q9UPN7 881 aa10.02□□□□□ -0.81
RTTN-213ENST00000638799 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
RTTN-213ENST00000638799 RALBP1Q15311 655 aa10.01□□□□□ -0.81
RTTN-213ENST00000638799 MYOM1P52179 1685 aa10.01□□□□□ -0.81
RTTN-213ENST00000638799 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
RTTN-213ENST00000638799 MYBBP1AQ9BQG0 1328 aaKnown RBP10.01□□□□□ -0.81
RTTN-213ENST00000638799 KTN1Q86UP2 1357 aaKnown RBP10□□□□□ -0.81
RTTN-213ENST00000638799 SENP3-EIF4A1A0A087X0R7 540 aa10□□□□□ -0.81
RTTN-213ENST00000638799 CENPJQ9HC77 1338 aaPredicted RBP10□□□□□ -0.81
RTTN-213ENST00000638799 MYO3AQ8NEV4 1616 aa10□□□□□ -0.81
RTTN-213ENST00000638799 TMC1Q8TDI8 760 aa10□□□□□ -0.81
RTTN-213ENST00000638799 PNISRQ8TF01 805 aaKnown RBP10□□□□□ -0.81
RTTN-213ENST00000638799 SPATA31D1Q6ZQQ2 1576 aa9.99□□□□□ -0.81
RTTN-213ENST00000638799 TRHP20396 242 aaPredicted RBP9.99□□□□□ -0.81
RTTN-213ENST00000638799 CDCA8Q53HL2 280 aa9.99□□□□□ -0.81
RTTN-213ENST00000638799 ZMYM3Q14202 1370 aa9.99□□□□□ -0.81
RTTN-213ENST00000638799 KDM5AP29375 1690 aaKnown RBP9.99□□□□□ -0.81
RTTN-213ENST00000638799 RTL5Q5HYW3 569 aaPredicted RBP9.99□□□□□ -0.81
RTTN-213ENST00000638799 STAG3Q9UJ98 1225 aa9.99□□□□□ -0.81
RTTN-213ENST00000638799 ZFYVE9O95405 1425 aa9.98□□□□□ -0.81
RTTN-213ENST00000638799 NBR1Q14596 966 aa9.98□□□□□ -0.81
RTTN-213ENST00000638799 ASXL1Q8IXJ9 1541 aa9.98□□□□□ -0.81
RTTN-213ENST00000638799 QRICH2Q9H0J4 1663 aa9.98□□□□□ -0.81
RTTN-213ENST00000638799 ESF1Q9H501 851 aaKnown RBP9.98□□□□□ -0.81
RTTN-213ENST00000638799 BRD4O60885 1362 aaPredicted RBP9.97□□□□□ -0.81
RTTN-213ENST00000638799 STK26Q9P289 416 aa9.97□□□□□ -0.81
RTTN-213ENST00000638799 A2ML1A8K2U0 1454 aa9.97□□□□□ -0.81
RTTN-213ENST00000638799 SBNO2Q9Y2G9 1366 aa9.97□□□□□ -0.81
RTTN-213ENST00000638799 KNSTRNQ9Y448 316 aa9.97□□□□□ -0.81
RTTN-213ENST00000638799 EIF5BO60841 1220 aaKnown RBP9.96□□□□□ -0.81
RTTN-213ENST00000638799 SAFB2Q14151 953 aaKnown RBP eCLIP9.96□□□□□ -0.81
RTTN-213ENST00000638799 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.81
RTTN-213ENST00000638799 NLRP13Q86W25 1043 aa9.96□□□□□ -0.82
RTTN-213ENST00000638799 ARHGEF28Q8N1W1 1705 aaKnown RBP9.96□□□□□ -0.82
RTTN-213ENST00000638799 CARD14Q9BXL6 1004 aa9.95□□□□□ -0.82
RTTN-213ENST00000638799 ZBED9Q6R2W3 1325 aa9.95□□□□□ -0.82
RTTN-213ENST00000638799 LRPPRCP42704 1394 aaKnown RBP9.94□□□□□ -0.82
RTTN-213ENST00000638799 RIMS2Q9UQ26 1411 aa9.94□□□□□ -0.82
RTTN-213ENST00000638799 CEBPAP49715 358 aaPredicted RBP9.94□□□□□ -0.82
RTTN-213ENST00000638799 ALKQ9UM73 1620 aa9.94□□□□□ -0.82
RTTN-213ENST00000638799 SLC12A5Q9H2X9 1139 aa9.93□□□□□ -0.82
RTTN-213ENST00000638799 TULP4Q9NRJ4 1543 aa9.93□□□□□ -0.82
RTTN-213ENST00000638799 PTPRMP28827 1452 aa9.92□□□□□ -0.82
RTTN-213ENST00000638799 YTHDC2Q9H6S0 1430 aaKnown RBP9.92□□□□□ -0.82
RTTN-213ENST00000638799 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
RTTN-213ENST00000638799 IRX6P78412 446 aaPredicted RBP9.92□□□□□ -0.82
RTTN-213ENST00000638799 TNRQ92752 1358 aa9.92□□□□□ -0.82
RTTN-213ENST00000638799 PLPPR3Q6T4P5 718 aa9.91□□□□□ -0.82
RTTN-213ENST00000638799 CABP2Q9NPB3 220 aa9.91□□□□□ -0.82
RTTN-213ENST00000638799 RTN4Q9NQC3 1192 aaKnown RBP9.91□□□□□ -0.82
RTTN-213ENST00000638799 PRAM1Q96QH2 718 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms