RNA–Protein interactions for RNA: ENST00000638786.1

ATM-227, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-227ENST00000638786 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
ATM-227ENST00000638786 DNAJB2P25686 324 aa12.29□□□□□ -0.44
ATM-227ENST00000638786 WNT2BQ93097 391 aa12.29□□□□□ -0.44
ATM-227ENST00000638786 ANKK1Q8NFD2 765 aa12.28□□□□□ -0.44
ATM-227ENST00000638786 KCTD12Q96CX2 325 aaKnown RBP12.28□□□□□ -0.44
ATM-227ENST00000638786 PHOX2BQ99453 314 aa12.28□□□□□ -0.44
ATM-227ENST00000638786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.27□□□□□ -0.45
ATM-227ENST00000638786 SAMD7Q7Z3H4 446 aa12.27□□□□□ -0.45
ATM-227ENST00000638786 NLRP7Q8WX94 980 aa12.27□□□□□ -0.45
ATM-227ENST00000638786 SWT1Q5T5J6 900 aaKnown RBP12.25□□□□□ -0.45
ATM-227ENST00000638786 TRIM66O15016 1216 aa12.24□□□□□ -0.45
ATM-227ENST00000638786 LRCH3Q96II8 777 aa12.24□□□□□ -0.45
ATM-227ENST00000638786 TMEM134Q9H6X4 195 aa12.24□□□□□ -0.45
ATM-227ENST00000638786 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.24□□□□□ -0.45
ATM-227ENST00000638786 RNF40O75150 1001 aa12.22□□□□□ -0.45
ATM-227ENST00000638786 BCAMP50895 628 aa12.22□□□□□ -0.45
ATM-227ENST00000638786 MDM2Q00987 491 aaPredicted RBP12.22□□□□□ -0.45
ATM-227ENST00000638786 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
ATM-227ENST00000638786 CC2D2AQ9P2K1 1620 aa12.2□□□□□ -0.46
ATM-227ENST00000638786 SOWAHBA6NEL2 793 aa12.2□□□□□ -0.46
ATM-227ENST00000638786 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
ATM-227ENST00000638786 DAXXQ9UER7 740 aaPredicted RBP12.2□□□□□ -0.46
ATM-227ENST00000638786 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
ATM-227ENST00000638786 PTPN5P54829 565 aa12.18□□□□□ -0.46
ATM-227ENST00000638786 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
ATM-227ENST00000638786 SLF2Q8IX21 1173 aa12.18□□□□□ -0.46
ATM-227ENST00000638786 CLCN1P35523 988 aa12.17□□□□□ -0.46
ATM-227ENST00000638786 AMHR2Q16671 573 aa12.17□□□□□ -0.46
ATM-227ENST00000638786 HPS5Q9UPZ3 1129 aa12.17□□□□□ -0.46
ATM-227ENST00000638786 PDE4DQ08499 809 aa12.16□□□□□ -0.46
ATM-227ENST00000638786 GPCPD1Q9NPB8 672 aa12.16□□□□□ -0.46
ATM-227ENST00000638786 PPP4CP60510 307 aa12.15□□□□□ -0.46
ATM-227ENST00000638786 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
ATM-227ENST00000638786 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
ATM-227ENST00000638786 TSR3Q9UJK0 312 aaKnown RBP12.14□□□□□ -0.47
ATM-227ENST00000638786 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
ATM-227ENST00000638786 SULF1Q8IWU6 871 aa12.12□□□□□ -0.47
ATM-227ENST00000638786 RDH13Q8NBN7 331 aa12.12□□□□□ -0.47
ATM-227ENST00000638786 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
ATM-227ENST00000638786 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
ATM-227ENST00000638786 PARP9Q8IXQ6 854 aa12.11□□□□□ -0.47
ATM-227ENST00000638786 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
ATM-227ENST00000638786 GIGYF2Q6Y7W6 1299 aaKnown RBP12.1□□□□□ -0.47
ATM-227ENST00000638786 NECTIN2Q92692 538 aa12.1□□□□□ -0.47
ATM-227ENST00000638786 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
ATM-227ENST00000638786 SLC10A3P09131 477 aa12.09□□□□□ -0.47
ATM-227ENST00000638786 SSTR3P32745 418 aaPredicted RBP12.08□□□□□ -0.48
ATM-227ENST00000638786 FAM217BQ9NTX9 383 aaPredicted RBP12.08□□□□□ -0.48
ATM-227ENST00000638786 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
ATM-227ENST00000638786 CFHP08603 1231 aa12.05□□□□□ -0.48
ATM-227ENST00000638786 GPBP1L1Q9HC44 474 aaPredicted RBP12.05□□□□□ -0.48
ATM-227ENST00000638786 PLA2G2EQ9NZK7 142 aa12.04□□□□□ -0.48
ATM-227ENST00000638786 CD46P15529 392 aa12.03□□□□□ -0.48
ATM-227ENST00000638786 KMT5BQ4FZB7 885 aa12.03□□□□□ -0.48
ATM-227ENST00000638786 NYAP1Q6ZVC0 841 aa12.03□□□□□ -0.48
ATM-227ENST00000638786 APLP1P51693 650 aa12.02□□□□□ -0.49
ATM-227ENST00000638786 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.49
ATM-227ENST00000638786 MS4A1P11836 297 aa12.01□□□□□ -0.49
ATM-227ENST00000638786 GCGRP47871 477 aa12.01□□□□□ -0.49
ATM-227ENST00000638786 PRR14Q9BWN1 585 aa12.01□□□□□ -0.49
ATM-227ENST00000638786 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
ATM-227ENST00000638786 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
ATM-227ENST00000638786 SMARCA4P51532 1647 aa11.98□□□□□ -0.49
ATM-227ENST00000638786 ACTN4O43707 911 aaKnown RBP11.97□□□□□ -0.49
ATM-227ENST00000638786 NUTM1Q86Y26 1132 aa11.96□□□□□ -0.49
ATM-227ENST00000638786 KDM4AO75164 1064 aa11.95□□□□□ -0.5
ATM-227ENST00000638786 PCDHB3Q9Y5E6 796 aa11.95□□□□□ -0.5
ATM-227ENST00000638786 FUT2Q10981 343 aa11.94□□□□□ -0.5
ATM-227ENST00000638786 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
ATM-227ENST00000638786 FAM117AQ9C073 453 aa11.93□□□□□ -0.5
ATM-227ENST00000638786 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
ATM-227ENST00000638786 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
ATM-227ENST00000638786 PUS10Q3MIT2 529 aaKnown RBP11.92□□□□□ -0.5
ATM-227ENST00000638786 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
ATM-227ENST00000638786 COPS2P61201 443 aa11.91□□□□□ -0.5
ATM-227ENST00000638786 GRIPAP1Q4V328 841 aa11.91□□□□□ -0.5
ATM-227ENST00000638786 USP46P62068 366 aa11.9□□□□□ -0.5
ATM-227ENST00000638786 SPIRE2Q8WWL2 714 aa11.9□□□□□ -0.5
ATM-227ENST00000638786 BLOC1S3Q6QNY0 202 aa11.89□□□□□ -0.51
ATM-227ENST00000638786 DDRGK1Q96HY6 314 aa11.89□□□□□ -0.51
ATM-227ENST00000638786 MTRQ99707 1265 aa11.89□□□□□ -0.51
ATM-227ENST00000638786 DIXDC1Q155Q3 683 aa11.88□□□□□ -0.51
ATM-227ENST00000638786 IL27Q8NEV9 243 aa11.88□□□□□ -0.51
ATM-227ENST00000638786 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
ATM-227ENST00000638786 NCAPD3P42695 1498 aa11.88□□□□□ -0.51
ATM-227ENST00000638786 TJAP1Q5JTD0 557 aa11.87□□□□□ -0.51
ATM-227ENST00000638786 IL21Q9HBE4 155 aa11.87□□□□□ -0.51
ATM-227ENST00000638786 HOXA2O43364 376 aa11.86□□□□□ -0.51
ATM-227ENST00000638786 NR1I2O75469 434 aa11.86□□□□□ -0.51
ATM-227ENST00000638786 MORN1Q5T089 497 aa11.86□□□□□ -0.51
ATM-227ENST00000638786 SMARCA2P51531 1590 aa11.86□□□□□ -0.51
ATM-227ENST00000638786 SCUBE3Q8IX30 993 aa11.85□□□□□ -0.51
ATM-227ENST00000638786 KCNC4Q03721 635 aa11.84□□□□□ -0.51
ATM-227ENST00000638786 ZNF516Q92618 1163 aa11.84□□□□□ -0.51
ATM-227ENST00000638786 HLA-CQ95604 372 aa11.84□□□□□ -0.51
ATM-227ENST00000638786 PLEKHG3A1L390 1219 aa11.83□□□□□ -0.52
ATM-227ENST00000638786 MOXD2PA6NHM9 499 aa11.83□□□□□ -0.52
ATM-227ENST00000638786 NDUFV2P19404 249 aa11.83□□□□□ -0.52
ATM-227ENST00000638786 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
ATM-227ENST00000638786 SLC27A5Q9Y2P5 690 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms