RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 UACAQ9BZF9 1416 aa22.59■■□□□ 1.21
SCARB2-213ENST00000638680 GPS2Q13227 327 aa22.59■■□□□ 1.21
SCARB2-213ENST00000638680 RUFY2Q8WXA3 655 aa22.59■■□□□ 1.21
SCARB2-213ENST00000638680 CHMP4CQ96CF2 233 aa22.59■■□□□ 1.21
SCARB2-213ENST00000638680 RIPK4P57078 832 aa22.58■■□□□ 1.21
SCARB2-213ENST00000638680 ZKSCAN1P17029 563 aaPredicted RBP22.58■■□□□ 1.21
SCARB2-213ENST00000638680 NUCB2P80303 420 aa22.58■■□□□ 1.21
SCARB2-213ENST00000638680 TPM1P09493 284 aa22.57■■□□□ 1.2
SCARB2-213ENST00000638680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.57■■□□□ 1.2
SCARB2-213ENST00000638680 LNPKQ9C0E8 428 aa22.57■■□□□ 1.2
SCARB2-213ENST00000638680 MARCH6O60337 910 aa22.56■■□□□ 1.2
SCARB2-213ENST00000638680 BICD2Q8TD16 824 aa22.56■■□□□ 1.2
SCARB2-213ENST00000638680 PANK1Q8TE04 598 aa22.56■■□□□ 1.2
SCARB2-213ENST00000638680 API5Q9BZZ5 524 aaKnown RBP22.56■■□□□ 1.2
SCARB2-213ENST00000638680 INTS3Q68E01 1043 aaKnown RBP22.56■■□□□ 1.2
SCARB2-213ENST00000638680 NGEFQ8N5V2 710 aa22.56■■□□□ 1.2
SCARB2-213ENST00000638680 RUNDC1Q96C34 613 aa22.55■■□□□ 1.2
SCARB2-213ENST00000638680 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
SCARB2-213ENST00000638680 FRAT2O75474 233 aaPredicted RBP22.55■■□□□ 1.2
SCARB2-213ENST00000638680 CEP89Q96ST8 783 aa22.55■■□□□ 1.2
SCARB2-213ENST00000638680 MRE11P49959 708 aa22.54■■□□□ 1.2
SCARB2-213ENST00000638680 TRHP20396 242 aaPredicted RBP22.53■■□□□ 1.2
SCARB2-213ENST00000638680 HOMER1Q86YM7 354 aa22.53■■□□□ 1.2
SCARB2-213ENST00000638680 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
SCARB2-213ENST00000638680 VPS37CA5D8V6 355 aaPredicted RBP22.53■■□□□ 1.2
SCARB2-213ENST00000638680 AKAP17AQ02040 695 aaKnown RBP22.53■■□□□ 1.2
SCARB2-213ENST00000638680 EIF2S2P20042 333 aaKnown RBP22.53■■□□□ 1.2
SCARB2-213ENST00000638680 NECTIN2Q92692 538 aa22.52■■□□□ 1.2
SCARB2-213ENST00000638680 CCDC70Q6NSX1 233 aa22.52■■□□□ 1.2
SCARB2-213ENST00000638680 IFIT2P09913 472 aaKnown RBP22.51■■□□□ 1.19
SCARB2-213ENST00000638680 SMC3Q9UQE7 1217 aa22.51■■□□□ 1.19
SCARB2-213ENST00000638680 R3HCC1Q9Y3T6 440 aaKnown RBP22.51■■□□□ 1.19
SCARB2-213ENST00000638680 MINK1Q8N4C8 1332 aaPredicted RBP22.51■■□□□ 1.19
SCARB2-213ENST00000638680 TPM2P07951 284 aa22.51■■□□□ 1.19
SCARB2-213ENST00000638680 C9orf78Q9NZ63 289 aaPredicted RBP22.51■■□□□ 1.19
SCARB2-213ENST00000638680 NASPP49321 788 aaPredicted RBP22.51■■□□□ 1.19
SCARB2-213ENST00000638680 VPS53Q5VIR6 699 aa22.51■■□□□ 1.19
SCARB2-213ENST00000638680 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
SCARB2-213ENST00000638680 TEX35Q5T0J7 233 aa22.5■■□□□ 1.19
SCARB2-213ENST00000638680 SYNE3Q6ZMZ3 975 aa22.5■■□□□ 1.19
SCARB2-213ENST00000638680 BRPF3Q9ULD4 1205 aa22.5■■□□□ 1.19
SCARB2-213ENST00000638680 TMX4Q9H1E5 349 aaPredicted RBP22.49■■□□□ 1.19
SCARB2-213ENST00000638680 C1orf141Q5JVX7 400 aa22.49■■□□□ 1.19
SCARB2-213ENST00000638680 FBXW7Q969H0 707 aa22.49■■□□□ 1.19
SCARB2-213ENST00000638680 SASS6Q6UVJ0 657 aa22.49■■□□□ 1.19
SCARB2-213ENST00000638680 IFT57Q9NWB7 429 aa22.49■■□□□ 1.19
SCARB2-213ENST00000638680 VGFO15240 615 aaPredicted RBP22.48■■□□□ 1.19
SCARB2-213ENST00000638680 TRIM29Q14134 588 aa22.48■■□□□ 1.19
SCARB2-213ENST00000638680 WASHC2AQ641Q2 1341 aa22.48■■□□□ 1.19
SCARB2-213ENST00000638680 TRAK2O60296 914 aa22.47■■□□□ 1.19
SCARB2-213ENST00000638680 TEFQ10587 303 aa22.47■■□□□ 1.19
SCARB2-213ENST00000638680 CPLX2Q6PUV4 134 aaKnown RBP22.47■■□□□ 1.19
SCARB2-213ENST00000638680 CCDC39Q9UFE4 941 aa22.47■■□□□ 1.19
SCARB2-213ENST00000638680 RNF20Q5VTR2 975 aa22.46■■□□□ 1.19
SCARB2-213ENST00000638680 CPLX1O14810 134 aa22.46■■□□□ 1.19
SCARB2-213ENST00000638680 CDC45O75419 566 aa22.45■■□□□ 1.18
SCARB2-213ENST00000638680 NEXNQ0ZGT2 675 aa22.45■■□□□ 1.18
SCARB2-213ENST00000638680 PCMTD1Q96MG8 357 aaPredicted RBP22.45■■□□□ 1.18
SCARB2-213ENST00000638680 AAMPQ13685 434 aa22.45■■□□□ 1.18
SCARB2-213ENST00000638680 JPH4Q96JJ6 628 aa22.45■■□□□ 1.18
SCARB2-213ENST00000638680 FKBP5Q13451 457 aaPredicted RBP22.45■■□□□ 1.18
SCARB2-213ENST00000638680 CDCA7LQ96GN5 454 aa22.45■■□□□ 1.18
SCARB2-213ENST00000638680 BRD4O60885 1362 aaPredicted RBP22.44■■□□□ 1.18
SCARB2-213ENST00000638680 BCL11BQ9C0K0 894 aaPredicted RBP22.44■■□□□ 1.18
SCARB2-213ENST00000638680 FOSBP53539 338 aa22.44■■□□□ 1.18
SCARB2-213ENST00000638680 LRRFIP1Q32MZ4 808 aaKnown RBP22.44■■□□□ 1.18
SCARB2-213ENST00000638680 RNF214Q8ND24 703 aa22.44■■□□□ 1.18
SCARB2-213ENST00000638680 ANO8Q9HCE9 1232 aaPredicted RBP22.43■■□□□ 1.18
SCARB2-213ENST00000638680 ADAMTS8Q9UP79 889 aa22.43■■□□□ 1.18
SCARB2-213ENST00000638680 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
SCARB2-213ENST00000638680 GTF2E1P29083 439 aaPredicted RBP22.43■■□□□ 1.18
SCARB2-213ENST00000638680 IL27Q8NEV9 243 aa22.42■■□□□ 1.18
SCARB2-213ENST00000638680 G3V3G9 751 aa22.42■■□□□ 1.18
SCARB2-213ENST00000638680 IPO7O95373 1038 aaKnown RBP22.42■■□□□ 1.18
SCARB2-213ENST00000638680 DCAF8Q5TAQ9 597 aa22.42■■□□□ 1.18
SCARB2-213ENST00000638680 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.42■■□□□ 1.18
SCARB2-213ENST00000638680 FGD6Q6ZV73 1430 aa22.41■■□□□ 1.18
SCARB2-213ENST00000638680 GNAI1P63096 354 aa22.41■■□□□ 1.18
SCARB2-213ENST00000638680 ANKRD20A12PQ8NF67 263 aa22.4■■□□□ 1.18
SCARB2-213ENST00000638680 PATL2C9JE40 543 aaKnown RBP22.4■■□□□ 1.18
SCARB2-213ENST00000638680 HOOK1Q9UJC3 728 aaKnown RBP22.4■■□□□ 1.18
SCARB2-213ENST00000638680 G3BP1Q13283 466 aaKnown RBP eCLIP22.4■■□□□ 1.18
SCARB2-213ENST00000638680 CAVIN1Q6NZI2 390 aaKnown RBP22.4■■□□□ 1.18
SCARB2-213ENST00000638680 APPP05067 770 aa22.4■■□□□ 1.18
SCARB2-213ENST00000638680 CCDC73Q6ZRK6 1079 aa22.39■■□□□ 1.18
SCARB2-213ENST00000638680 MNS1Q8NEH6 495 aa22.39■■□□□ 1.18
SCARB2-213ENST00000638680 ARGLU1Q9NWB6 273 aaPredicted RBP22.38■■□□□ 1.17
SCARB2-213ENST00000638680 HMOX1P09601 288 aa22.38■■□□□ 1.17
SCARB2-213ENST00000638680 MYOM3Q5VTT5 1437 aa22.36■■□□□ 1.17
SCARB2-213ENST00000638680 TTC5Q8N0Z6 440 aa22.36■■□□□ 1.17
SCARB2-213ENST00000638680 PRM3Q9NNZ6 103 aa22.36■■□□□ 1.17
SCARB2-213ENST00000638680 PDZRN3Q9UPQ7 1066 aa22.36■■□□□ 1.17
SCARB2-213ENST00000638680 TSPYL4Q9UJ04 414 aa22.36■■□□□ 1.17
SCARB2-213ENST00000638680 ERC2O15083 957 aa22.35■■□□□ 1.17
SCARB2-213ENST00000638680 TRDNQ13061 729 aa22.35■■□□□ 1.17
SCARB2-213ENST00000638680 MIA2Q96PC5 1412 aa22.35■■□□□ 1.17
SCARB2-213ENST00000638680 AKNAQ7Z591 1439 aa22.35■■□□□ 1.17
SCARB2-213ENST00000638680 NFXL1Q6ZNB6 911 aa22.35■■□□□ 1.17
SCARB2-213ENST00000638680 CCDC47Q96A33 483 aaKnown RBP22.34■■□□□ 1.17
SCARB2-213ENST00000638680 MTERF4Q7Z6M4 381 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms