RNA–Protein interactions for RNA: ENST00000638578.1

STRADA-228, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 3

Gene STRADA, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-228ENST00000638578 GCC2Q8IWJ2 1684 aa12□□□□□ -0.49
STRADA-228ENST00000638578 KCNA6P17658 529 aa11.99□□□□□ -0.49
STRADA-228ENST00000638578 KANK1Q14678 1352 aa11.99□□□□□ -0.49
STRADA-228ENST00000638578 KIF15Q9NS87 1388 aa11.99□□□□□ -0.49
STRADA-228ENST00000638578 PTPN23Q9H3S7 1636 aa11.98□□□□□ -0.49
STRADA-228ENST00000638578 MSH6P52701 1360 aa11.98□□□□□ -0.49
STRADA-228ENST00000638578 JCADQ9P266 1359 aa11.98□□□□□ -0.49
STRADA-228ENST00000638578 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
STRADA-228ENST00000638578 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
STRADA-228ENST00000638578 RNF39Q9H2S5 420 aa11.97□□□□□ -0.49
STRADA-228ENST00000638578 FGD6Q6ZV73 1430 aa11.96□□□□□ -0.49
STRADA-228ENST00000638578 VPS8Q8N3P4 1428 aa11.96□□□□□ -0.49
STRADA-228ENST00000638578 AHDC1Q5TGY3 1603 aaPredicted RBP11.96□□□□□ -0.5
STRADA-228ENST00000638578 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.95□□□□□ -0.5
STRADA-228ENST00000638578 PROSER2Q86WR7 435 aaPredicted RBP11.95□□□□□ -0.5
STRADA-228ENST00000638578 DIP2AQ14689 1571 aa11.94□□□□□ -0.5
STRADA-228ENST00000638578 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
STRADA-228ENST00000638578 NOS1P29475 1434 aa11.94□□□□□ -0.5
STRADA-228ENST00000638578 NCOA3Q9Y6Q9 1424 aa11.94□□□□□ -0.5
STRADA-228ENST00000638578 SPATA31A6Q5VVP1 1343 aa11.92□□□□□ -0.5
STRADA-228ENST00000638578 TMEM131LA2VDJ0 1609 aa11.92□□□□□ -0.5
STRADA-228ENST00000638578 DAPK1P53355 1430 aa11.92□□□□□ -0.5
STRADA-228ENST00000638578 CDK12Q9NYV4 1490 aaPredicted RBP11.91□□□□□ -0.5
STRADA-228ENST00000638578 LRP6O75581 1613 aa11.91□□□□□ -0.5
STRADA-228ENST00000638578 ZNF772Q68DY9 489 aaPredicted RBP11.91□□□□□ -0.5
STRADA-228ENST00000638578 SLC26A8Q96RN1 970 aa11.91□□□□□ -0.5
STRADA-228ENST00000638578 SLAIN2Q9P270 581 aa11.91□□□□□ -0.5
STRADA-228ENST00000638578 ABCC5O15440 1437 aa11.91□□□□□ -0.5
STRADA-228ENST00000638578 PLEKHG1Q9ULL1 1385 aa11.91□□□□□ -0.5
STRADA-228ENST00000638578 ZFYVE9O95405 1425 aa11.9□□□□□ -0.5
STRADA-228ENST00000638578 IDI1Q13907 227 aa11.9□□□□□ -0.5
STRADA-228ENST00000638578 SLC52A1Q9NWF4 448 aa11.89□□□□□ -0.51
STRADA-228ENST00000638578 ANKRD30AQ9BXX3 1397 aa11.89□□□□□ -0.51
STRADA-228ENST00000638578 NHSL1Q5SYE7 1610 aa11.89□□□□□ -0.51
STRADA-228ENST00000638578 MEX3CQ5U5Q3 659 aaKnown RBP11.88□□□□□ -0.51
STRADA-228ENST00000638578 RRP7BPQ9NSQ0 103 aa11.88□□□□□ -0.51
STRADA-228ENST00000638578 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
STRADA-228ENST00000638578 RBM33Q96EV2 1170 aaKnown RBP11.87□□□□□ -0.51
STRADA-228ENST00000638578 BCANQ96GW7 911 aa11.87□□□□□ -0.51
STRADA-228ENST00000638578 TRPM2O94759 1503 aa11.86□□□□□ -0.51
STRADA-228ENST00000638578 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
STRADA-228ENST00000638578 ADGRL2O95490 1459 aa11.86□□□□□ -0.51
STRADA-228ENST00000638578 UNC13BO14795 1591 aa11.86□□□□□ -0.51
STRADA-228ENST00000638578 RIMS2Q9UQ26 1411 aa11.86□□□□□ -0.51
STRADA-228ENST00000638578 PIK3R4Q99570 1358 aa11.85□□□□□ -0.51
STRADA-228ENST00000638578 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
STRADA-228ENST00000638578 KANK4Q5T7N3 995 aaPredicted RBP11.85□□□□□ -0.51
STRADA-228ENST00000638578 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
STRADA-228ENST00000638578 DCCP43146 1447 aa11.85□□□□□ -0.51
STRADA-228ENST00000638578 E9PCH4 1651 aa11.84□□□□□ -0.51
STRADA-228ENST00000638578 XRN1Q8IZH2 1706 aaKnown RBP11.84□□□□□ -0.51
STRADA-228ENST00000638578 PPP1R15AO75807 674 aaPredicted RBP11.84□□□□□ -0.51
STRADA-228ENST00000638578 CADPS2Q86UW7 1296 aa11.84□□□□□ -0.51
STRADA-228ENST00000638578 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
STRADA-228ENST00000638578 IQGAP3Q86VI3 1631 aa11.83□□□□□ -0.52
STRADA-228ENST00000638578 TRIM52Q96A61 297 aa11.83□□□□□ -0.52
STRADA-228ENST00000638578 TBX22Q9Y458 520 aa11.83□□□□□ -0.52
STRADA-228ENST00000638578 ASXL1Q8IXJ9 1541 aa11.82□□□□□ -0.52
STRADA-228ENST00000638578 RXRBP28702 533 aa11.82□□□□□ -0.52
STRADA-228ENST00000638578 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
STRADA-228ENST00000638578 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.82□□□□□ -0.52
STRADA-228ENST00000638578 ATF3P18847 181 aa11.81□□□□□ -0.52
STRADA-228ENST00000638578 C19orf44Q9H6X5 657 aa11.81□□□□□ -0.52
STRADA-228ENST00000638578 ADAMTS13Q76LX8 1427 aa11.8□□□□□ -0.52
STRADA-228ENST00000638578 NALCNQ8IZF0 1738 aa11.8□□□□□ -0.52
STRADA-228ENST00000638578 NRXN3Q9Y4C0 1643 aa11.79□□□□□ -0.52
STRADA-228ENST00000638578 SETD5Q9C0A6 1442 aa11.79□□□□□ -0.52
STRADA-228ENST00000638578 SPHKAPQ2M3C7 1700 aa11.79□□□□□ -0.52
STRADA-228ENST00000638578 LAMC1P11047 1609 aa11.78□□□□□ -0.52
STRADA-228ENST00000638578 ANKRD50Q9ULJ7 1429 aa11.78□□□□□ -0.52
STRADA-228ENST00000638578 SETBP1Q9Y6X0 1596 aa11.78□□□□□ -0.52
STRADA-228ENST00000638578 RGS12O14924 1447 aa11.77□□□□□ -0.52
STRADA-228ENST00000638578 APLP2Q06481 763 aa11.77□□□□□ -0.53
STRADA-228ENST00000638578 CHIC2Q9UKJ5 165 aa11.77□□□□□ -0.53
STRADA-228ENST00000638578 AFF2P51816 1311 aa11.77□□□□□ -0.53
STRADA-228ENST00000638578 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.53
STRADA-228ENST00000638578 BRINP3Q76B58 766 aa11.76□□□□□ -0.53
STRADA-228ENST00000638578 ZBTB22O15209 634 aa11.75□□□□□ -0.53
STRADA-228ENST00000638578 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
STRADA-228ENST00000638578 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
STRADA-228ENST00000638578 MST1RQ04912 1400 aa11.75□□□□□ -0.53
STRADA-228ENST00000638578 NUTM2BA6NNL0 878 aaPredicted RBP11.74□□□□□ -0.53
STRADA-228ENST00000638578 NUTM2EB1AL46 878 aaPredicted RBP11.74□□□□□ -0.53
STRADA-228ENST00000638578 NUTM2AQ8IVF1 878 aaPredicted RBP11.74□□□□□ -0.53
STRADA-228ENST00000638578 KIF1BO60333 1816 aa11.74□□□□□ -0.53
STRADA-228ENST00000638578 RBM6P78332 1123 aaKnown RBP11.73□□□□□ -0.53
STRADA-228ENST00000638578 PTPRUQ92729 1446 aa11.73□□□□□ -0.53
STRADA-228ENST00000638578 LRRC59Q96AG4 307 aaKnown RBP11.73□□□□□ -0.53
STRADA-228ENST00000638578 COL22A1Q8NFW1 1626 aaPredicted RBP11.72□□□□□ -0.53
STRADA-228ENST00000638578 ADGRL3Q9HAR2 1447 aa11.72□□□□□ -0.53
STRADA-228ENST00000638578 ATAD2Q6PL18 1390 aa11.72□□□□□ -0.53
STRADA-228ENST00000638578 PNPLA6Q8IY17 1366 aa11.72□□□□□ -0.53
STRADA-228ENST00000638578 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
STRADA-228ENST00000638578 AMOTL2Q9Y2J4 779 aa11.72□□□□□ -0.53
STRADA-228ENST00000638578 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.71□□□□□ -0.54
STRADA-228ENST00000638578 NGLY1Q96IV0 654 aa11.7□□□□□ -0.54
STRADA-228ENST00000638578 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
STRADA-228ENST00000638578 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
STRADA-228ENST00000638578 QTRT2Q9H974 415 aaKnown RBP11.69□□□□□ -0.54
STRADA-228ENST00000638578 PTCH1Q13635 1447 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms