RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 KIAA1210Q9ULL0 1709 aa22.79■■□□□ 1.24
HCG27-205ENST00000638546 NRXN1Q9ULB1 1477 aa22.78■■□□□ 1.24
HCG27-205ENST00000638546 MROH2AA6NES4 1674 aa22.77■■□□□ 1.24
HCG27-205ENST00000638546 CFAP70Q5T0N1 1121 aa22.76■■□□□ 1.23
HCG27-205ENST00000638546 SLC52A1Q9NWF4 448 aa22.76■■□□□ 1.23
HCG27-205ENST00000638546 IFT172Q9UG01 1749 aa22.75■■□□□ 1.23
HCG27-205ENST00000638546 SYNMO15061 1565 aa22.75■■□□□ 1.23
HCG27-205ENST00000638546 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
HCG27-205ENST00000638546 IQGAP1P46940 1657 aa22.74■■□□□ 1.23
HCG27-205ENST00000638546 SIGLEC1Q9BZZ2 1709 aa22.74■■□□□ 1.23
HCG27-205ENST00000638546 EIF3AQ14152 1382 aaKnown RBP22.74■■□□□ 1.23
HCG27-205ENST00000638546 PIK3C2BO00750 1634 aa22.73■■□□□ 1.23
HCG27-205ENST00000638546 IDI1Q13907 227 aa22.71■■□□□ 1.23
HCG27-205ENST00000638546 CCDC184Q52MB2 194 aa22.71■■□□□ 1.23
HCG27-205ENST00000638546 MRS2Q9HD23 443 aa22.7■■□□□ 1.22
HCG27-205ENST00000638546 CFAP65Q6ZU64 1925 aaKnown RBP22.69■■□□□ 1.22
HCG27-205ENST00000638546 SLC24A1O60721 1099 aa22.69■■□□□ 1.22
HCG27-205ENST00000638546 CDCA8Q53HL2 280 aa22.69■■□□□ 1.22
HCG27-205ENST00000638546 ARHGEF40Q8TER5 1519 aa22.69■■□□□ 1.22
HCG27-205ENST00000638546 C14orf93Q9H972 538 aaKnown RBP22.68■■□□□ 1.22
HCG27-205ENST00000638546 KTN1Q86UP2 1357 aaKnown RBP22.68■■□□□ 1.22
HCG27-205ENST00000638546 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
HCG27-205ENST00000638546 PIK3C2GO75747 1445 aa22.67■■□□□ 1.22
HCG27-205ENST00000638546 PPLO60437 1756 aa22.66■■□□□ 1.22
HCG27-205ENST00000638546 RALBP1Q15311 655 aa22.65■■□□□ 1.22
HCG27-205ENST00000638546 PREX1Q8TCU6 1659 aa22.65■■□□□ 1.22
HCG27-205ENST00000638546 FBXO31Q5XUX0 539 aaPredicted RBP22.64■■□□□ 1.22
HCG27-205ENST00000638546 SETBP1Q9Y6X0 1596 aa22.64■■□□□ 1.22
HCG27-205ENST00000638546 ERVK-7P63135 1459 aa22.64■■□□□ 1.21
HCG27-205ENST00000638546 PER1O15534 1290 aaPredicted RBP22.62■■□□□ 1.21
HCG27-205ENST00000638546 CNGB1Q14028 1251 aaPredicted RBP22.62■■□□□ 1.21
HCG27-205ENST00000638546 MLECQ14165 292 aa22.62■■□□□ 1.21
HCG27-205ENST00000638546 ZFYVE9O95405 1425 aa22.62■■□□□ 1.21
HCG27-205ENST00000638546 NEXMIFQ5QGS0 1516 aa22.62■■□□□ 1.21
HCG27-205ENST00000638546 PANK3Q9H999 370 aa22.61■■□□□ 1.21
HCG27-205ENST00000638546 HNRNPUQ00839 825 aaKnown RBP eCLIP22.6■■□□□ 1.21
HCG27-205ENST00000638546 FAM9BQ8IZU0 186 aa22.59■■□□□ 1.21
HCG27-205ENST00000638546 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
HCG27-205ENST00000638546 ESF1Q9H501 851 aaKnown RBP22.57■■□□□ 1.2
HCG27-205ENST00000638546 CLTCQ00610 1675 aaKnown RBP22.57■■□□□ 1.2
HCG27-205ENST00000638546 TMEM131LA2VDJ0 1609 aa22.56■■□□□ 1.2
HCG27-205ENST00000638546 NUTM2DQ5VT03 806 aaPredicted RBP22.56■■□□□ 1.2
HCG27-205ENST00000638546 ADGRB1O14514 1584 aa22.55■■□□□ 1.2
HCG27-205ENST00000638546 SBNO2Q9Y2G9 1366 aa22.55■■□□□ 1.2
HCG27-205ENST00000638546 CENPJQ9HC77 1338 aaPredicted RBP22.55■■□□□ 1.2
HCG27-205ENST00000638546 TMC1Q8TDI8 760 aa22.54■■□□□ 1.2
HCG27-205ENST00000638546 PARD3Q8TEW0 1356 aa22.54■■□□□ 1.2
HCG27-205ENST00000638546 TMEM132EQ6IEE7 984 aa22.53■■□□□ 1.2
HCG27-205ENST00000638546 STAG3Q9UJ98 1225 aa22.53■■□□□ 1.2
HCG27-205ENST00000638546 TRAK1Q9UPV9 953 aa22.53■■□□□ 1.2
HCG27-205ENST00000638546 BRD4O60885 1362 aaPredicted RBP22.53■■□□□ 1.2
HCG27-205ENST00000638546 SPATA31D1Q6ZQQ2 1576 aa22.53■■□□□ 1.2
HCG27-205ENST00000638546 MYO3AQ8NEV4 1616 aa22.53■■□□□ 1.2
HCG27-205ENST00000638546 ZMYM3Q14202 1370 aa22.51■■□□□ 1.19
HCG27-205ENST00000638546 PNISRQ8TF01 805 aaKnown RBP22.49■■□□□ 1.19
HCG27-205ENST00000638546 NLRP13Q86W25 1043 aa22.48■■□□□ 1.19
HCG27-205ENST00000638546 KNSTRNQ9Y448 316 aa22.48■■□□□ 1.19
HCG27-205ENST00000638546 CC2D1BQ5T0F9 858 aaKnown RBP22.46■■□□□ 1.19
HCG27-205ENST00000638546 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
HCG27-205ENST00000638546 KDM4FA0A1W2PPD8 638 aa22.46■■□□□ 1.19
HCG27-205ENST00000638546 A2ML1A8K2U0 1454 aa22.45■■□□□ 1.18
HCG27-205ENST00000638546 ZBED9Q6R2W3 1325 aa22.43■■□□□ 1.18
HCG27-205ENST00000638546 MYO5BQ9ULV0 1848 aa22.43■■□□□ 1.18
HCG27-205ENST00000638546 PUS7Q96PZ0 661 aaKnown RBP22.42■■□□□ 1.18
HCG27-205ENST00000638546 AMER1Q5JTC6 1135 aaPredicted RBP22.41■■□□□ 1.18
HCG27-205ENST00000638546 RIMS2Q9UQ26 1411 aa22.41■■□□□ 1.18
HCG27-205ENST00000638546 NPC1L1Q9UHC9 1359 aa22.4■■□□□ 1.18
HCG27-205ENST00000638546 LRPPRCP42704 1394 aaKnown RBP22.39■■□□□ 1.18
HCG27-205ENST00000638546 TNRQ92752 1358 aa22.39■■□□□ 1.18
HCG27-205ENST00000638546 MYOM1P52179 1685 aa22.39■■□□□ 1.17
HCG27-205ENST00000638546 ASXL1Q8IXJ9 1541 aa22.39■■□□□ 1.17
HCG27-205ENST00000638546 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.39■■□□□ 1.17
HCG27-205ENST00000638546 QRICH2Q9H0J4 1663 aa22.38■■□□□ 1.17
HCG27-205ENST00000638546 EVC2Q86UK5 1308 aa22.37■■□□□ 1.17
HCG27-205ENST00000638546 STK26Q9P289 416 aa22.37■■□□□ 1.17
HCG27-205ENST00000638546 HDGFP51858 240 aaKnown RBP22.35■■□□□ 1.17
HCG27-205ENST00000638546 ALKQ9UM73 1620 aa22.35■■□□□ 1.17
HCG27-205ENST00000638546 SUPT16HQ9Y5B9 1047 aaKnown RBP22.35■■□□□ 1.17
HCG27-205ENST00000638546 YTHDC2Q9H6S0 1430 aaKnown RBP22.35■■□□□ 1.17
HCG27-205ENST00000638546 ARHGEF28Q8N1W1 1705 aaKnown RBP22.34■■□□□ 1.17
HCG27-205ENST00000638546 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
HCG27-205ENST00000638546 CARD14Q9BXL6 1004 aa22.33■■□□□ 1.17
HCG27-205ENST00000638546 PPP2R1AP30153 589 aa22.31■■□□□ 1.16
HCG27-205ENST00000638546 NEFLP07196 543 aa22.31■■□□□ 1.16
HCG27-205ENST00000638546 POGKQ9P215 609 aa22.3■■□□□ 1.16
HCG27-205ENST00000638546 PTPRMP28827 1452 aa22.29■■□□□ 1.16
HCG27-205ENST00000638546 SLC12A5Q9H2X9 1139 aa22.29■■□□□ 1.16
HCG27-205ENST00000638546 INSRP06213 1382 aa22.28■■□□□ 1.16
HCG27-205ENST00000638546 TULP4Q9NRJ4 1543 aa22.28■■□□□ 1.16
HCG27-205ENST00000638546 PRAM1Q96QH2 718 aa22.28■■□□□ 1.16
HCG27-205ENST00000638546 SAFB2Q14151 953 aaKnown RBP eCLIP22.27■■□□□ 1.16
HCG27-205ENST00000638546 FKBP8Q14318 412 aa22.26■■□□□ 1.15
HCG27-205ENST00000638546 NLRP1Q9C000 1473 aa22.25■■□□□ 1.15
HCG27-205ENST00000638546 TMEM2Q9UHN6 1383 aa22.25■■□□□ 1.15
HCG27-205ENST00000638546 CABP2Q9NPB3 220 aa22.24■■□□□ 1.15
HCG27-205ENST00000638546 FER1L4A9Z1Z3 1794 aa22.24■■□□□ 1.15
HCG27-205ENST00000638546 DLC1Q96QB1 1528 aa22.24■■□□□ 1.15
HCG27-205ENST00000638546 CEBPAP49715 358 aaPredicted RBP22.24■■□□□ 1.15
HCG27-205ENST00000638546 ABCC11Q96J66 1382 aa22.23■■□□□ 1.15
HCG27-205ENST00000638546 MINK1Q8N4C8 1332 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms