RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 RILPL2Q969X0 211 aa15.9■□□□□ 0.14
UBE3A-228ENST00000638155 U2AF1L5P0DN76 240 aaPredicted RBP15.9■□□□□ 0.14
UBE3A-228ENST00000638155 U2AF1Q01081 240 aaKnown RBP eCLIP15.9■□□□□ 0.142e-7■■■■□ 25
UBE3A-228ENST00000638155 MLECQ14165 292 aa15.89■□□□□ 0.13
UBE3A-228ENST00000638155 FBXW7Q969H0 707 aa15.89■□□□□ 0.13
UBE3A-228ENST00000638155 EIF3AQ14152 1382 aaKnown RBP15.89■□□□□ 0.13
UBE3A-228ENST00000638155 PDILTQ8N807 584 aa15.88■□□□□ 0.13
UBE3A-228ENST00000638155 SEPT11Q9NVA2 429 aaKnown RBP15.88■□□□□ 0.13
UBE3A-228ENST00000638155 BCL11BQ9C0K0 894 aaPredicted RBP15.87■□□□□ 0.13
UBE3A-228ENST00000638155 GBP2P32456 591 aaPredicted RBP15.87■□□□□ 0.13
UBE3A-228ENST00000638155 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
UBE3A-228ENST00000638155 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
UBE3A-228ENST00000638155 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.86■□□□□ 0.13
UBE3A-228ENST00000638155 REC8O95072 547 aa15.86■□□□□ 0.13
UBE3A-228ENST00000638155 NF2P35240 595 aa15.86■□□□□ 0.13
UBE3A-228ENST00000638155 TTLL5Q6EMB2 1281 aa15.86■□□□□ 0.13
UBE3A-228ENST00000638155 RUFY2Q8WXA3 655 aa15.86■□□□□ 0.13
UBE3A-228ENST00000638155 MSH5O43196 834 aa15.86■□□□□ 0.13
UBE3A-228ENST00000638155 DHX16O60231 1041 aaKnown RBP15.86■□□□□ 0.13
UBE3A-228ENST00000638155 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
UBE3A-228ENST00000638155 ZKSCAN1P17029 563 aaPredicted RBP15.86■□□□□ 0.13
UBE3A-228ENST00000638155 BCCIPQ9P287 314 aaKnown RBP eCLIP15.86■□□□□ 0.13
UBE3A-228ENST00000638155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.86■□□□□ 0.13
UBE3A-228ENST00000638155 RABEP1Q15276 862 aa15.86■□□□□ 0.13
UBE3A-228ENST00000638155 CCDC73Q6ZRK6 1079 aa15.86■□□□□ 0.13
UBE3A-228ENST00000638155 SMARCE1Q969G3 411 aa15.85■□□□□ 0.13
UBE3A-228ENST00000638155 RALBP1Q15311 655 aa15.84■□□□□ 0.13
UBE3A-228ENST00000638155 LMOD3Q0VAK6 560 aa15.84■□□□□ 0.13
UBE3A-228ENST00000638155 FAM161AQ3B820 660 aa15.84■□□□□ 0.13
UBE3A-228ENST00000638155 ANO2Q9NQ90 1003 aa15.83■□□□□ 0.13
UBE3A-228ENST00000638155 SAFBQ15424 915 aaKnown RBP eCLIP15.83■□□□□ 0.13
UBE3A-228ENST00000638155 NASPP49321 788 aaPredicted RBP15.83■□□□□ 0.12
UBE3A-228ENST00000638155 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
UBE3A-228ENST00000638155 SYCP1Q15431 976 aa15.83■□□□□ 0.12
UBE3A-228ENST00000638155 ERICH2A1L162 156 aa15.83■□□□□ 0.12
UBE3A-228ENST00000638155 NFXL1Q6ZNB6 911 aa15.82■□□□□ 0.12
UBE3A-228ENST00000638155 EIF3JO75822 258 aaKnown RBP15.82■□□□□ 0.12
UBE3A-228ENST00000638155 BRMS1Q9HCU9 246 aa15.82■□□□□ 0.12
UBE3A-228ENST00000638155 TRDNQ13061 729 aa15.81■□□□□ 0.12
UBE3A-228ENST00000638155 HMGN5P82970 282 aaKnown RBP15.81■□□□□ 0.12
UBE3A-228ENST00000638155 SAFB2Q14151 953 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■■■□□ 15.5
UBE3A-228ENST00000638155 RNF20Q5VTR2 975 aa15.81■□□□□ 0.12
UBE3A-228ENST00000638155 WWC2Q6AWC2 1192 aa15.8■□□□□ 0.12
UBE3A-228ENST00000638155 PHLDB1Q86UU1 1377 aa15.8■□□□□ 0.12
UBE3A-228ENST00000638155 CENPQQ7L2Z9 268 aaPredicted RBP15.8■□□□□ 0.12
UBE3A-228ENST00000638155 SLC26A8Q96RN1 970 aa15.8■□□□□ 0.12
UBE3A-228ENST00000638155 CENPHQ9H3R5 247 aa15.8■□□□□ 0.12
UBE3A-228ENST00000638155 CEP63Q96MT8 703 aa15.79■□□□□ 0.12
UBE3A-228ENST00000638155 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
UBE3A-228ENST00000638155 SPATA24Q86W54 205 aa15.79■□□□□ 0.12
UBE3A-228ENST00000638155 IQCEQ6IPM2 695 aa15.79■□□□□ 0.12
UBE3A-228ENST00000638155 DHX37Q8IY37 1157 aaKnown RBP15.79■□□□□ 0.12
UBE3A-228ENST00000638155 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
UBE3A-228ENST00000638155 TXLNBQ8N3L3 684 aa15.78■□□□□ 0.12
UBE3A-228ENST00000638155 TSHZ2Q9NRE2 1034 aa15.78■□□□□ 0.12
UBE3A-228ENST00000638155 TAX1BP1Q86VP1 789 aa15.78■□□□□ 0.12
UBE3A-228ENST00000638155 FOXD1Q16676 465 aa15.78■□□□□ 0.12
UBE3A-228ENST00000638155 LUC7LQ9NQ29 371 aaKnown RBP15.78■□□□□ 0.12
UBE3A-228ENST00000638155 MAGEC2Q9UBF1 373 aaPredicted RBP15.78■□□□□ 0.12
UBE3A-228ENST00000638155 VPS37CA5D8V6 355 aaPredicted RBP15.78■□□□□ 0.12
UBE3A-228ENST00000638155 ANKRD45Q5TZF3 282 aa15.77■□□□□ 0.12
UBE3A-228ENST00000638155 CHMP5Q9NZZ3 219 aa15.77■□□□□ 0.12
UBE3A-228ENST00000638155 ERLIN1O75477 346 aa15.77■□□□□ 0.11
UBE3A-228ENST00000638155 LETM1O95202 739 aaPredicted RBP15.77■□□□□ 0.11
UBE3A-228ENST00000638155 VPS37DQ86XT2 251 aa15.77■□□□□ 0.11
UBE3A-228ENST00000638155 EEA1Q15075 1411 aa15.76■□□□□ 0.11
UBE3A-228ENST00000638155 SMC2O95347 1197 aa15.76■□□□□ 0.11
UBE3A-228ENST00000638155 CCDC97Q96F63 343 aaPredicted RBP15.76■□□□□ 0.11
UBE3A-228ENST00000638155 CCDC91Q7Z6B0 441 aa15.76■□□□□ 0.11
UBE3A-228ENST00000638155 CLUAP1Q96AJ1 413 aa15.76■□□□□ 0.11
UBE3A-228ENST00000638155 PPM1EQ8WY54 764 aa15.76■□□□□ 0.11
UBE3A-228ENST00000638155 RBM33Q96EV2 1170 aaKnown RBP15.76■□□□□ 0.11
UBE3A-228ENST00000638155 NUCB2P80303 420 aa15.76■□□□□ 0.11
UBE3A-228ENST00000638155 GOLGA6L10A0A0M3HER8 536 aa15.75■□□□□ 0.11
UBE3A-228ENST00000638155 SMC3Q9UQE7 1217 aa15.75■□□□□ 0.11
UBE3A-228ENST00000638155 TMEM132AQ24JP5 1023 aa15.75■□□□□ 0.11
UBE3A-228ENST00000638155 DHX8Q14562 1220 aaKnown RBP15.75■□□□□ 0.11
UBE3A-228ENST00000638155 KIF7Q2M1P5 1343 aa15.75■□□□□ 0.11
UBE3A-228ENST00000638155 KLHL34Q8N239 644 aa15.75■□□□□ 0.11
UBE3A-228ENST00000638155 TRIM5Q9C035 493 aa15.75■□□□□ 0.11
UBE3A-228ENST00000638155 LRRCC1Q9C099 1032 aa15.75■□□□□ 0.11
UBE3A-228ENST00000638155 STAMBPO95630 424 aa15.74■□□□□ 0.11
UBE3A-228ENST00000638155 FILIP1LQ4L180 1135 aa15.74■□□□□ 0.11
UBE3A-228ENST00000638155 CCDC181Q5TID7 509 aa15.74■□□□□ 0.11
UBE3A-228ENST00000638155 ZNHIT6Q9NWK9 470 aaKnown RBP15.74■□□□□ 0.11
UBE3A-228ENST00000638155 KIF3BO15066 747 aa15.73■□□□□ 0.11
UBE3A-228ENST00000638155 CFAP57Q96MR6 1250 aa15.73■□□□□ 0.11
UBE3A-228ENST00000638155 XBP1P17861 261 aa15.73■□□□□ 0.11
UBE3A-228ENST00000638155 CCDC146Q8IYE0 955 aa15.73■□□□□ 0.11
UBE3A-228ENST00000638155 CCDC112Q8NEF3 446 aa15.73■□□□□ 0.11
UBE3A-228ENST00000638155 EVA1CP58658 441 aa15.72■□□□□ 0.11
UBE3A-228ENST00000638155 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
UBE3A-228ENST00000638155 FEZ1Q99689 392 aa15.72■□□□□ 0.11
UBE3A-228ENST00000638155 DDX11Q96FC9 970 aa15.72■□□□□ 0.11
UBE3A-228ENST00000638155 EID1Q9Y6B2 187 aa15.72■□□□□ 0.11
UBE3A-228ENST00000638155 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
UBE3A-228ENST00000638155 FOSBP53539 338 aa15.71■□□□□ 0.11
UBE3A-228ENST00000638155 PIP4K2AP48426 406 aaPredicted RBP15.71■□□□□ 0.11
UBE3A-228ENST00000638155 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
UBE3A-228ENST00000638155 MRE11P49959 708 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms