RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
MECP2-225ENST00000638041 RPGRIP1LQ68CZ1 1315 aa10.46□□□□□ -0.73
MECP2-225ENST00000638041 ARHGAP23Q9P227 1491 aa10.45□□□□□ -0.74
MECP2-225ENST00000638041 SYNMO15061 1565 aa10.44□□□□□ -0.74
MECP2-225ENST00000638041 RIMS2Q9UQ26 1411 aa10.44□□□□□ -0.74
MECP2-225ENST00000638041 KCNA6P17658 529 aa10.44□□□□□ -0.74
MECP2-225ENST00000638041 SETD5Q9C0A6 1442 aa10.43□□□□□ -0.74
MECP2-225ENST00000638041 PIK3R4Q99570 1358 aa10.43□□□□□ -0.74
MECP2-225ENST00000638041 PLEKHG1Q9ULL1 1385 aa10.43□□□□□ -0.74
MECP2-225ENST00000638041 HRCP23327 699 aa10.43□□□□□ -0.74
MECP2-225ENST00000638041 PROSER2Q86WR7 435 aaPredicted RBP10.43□□□□□ -0.74
MECP2-225ENST00000638041 TBX22Q9Y458 520 aa10.43□□□□□ -0.74
MECP2-225ENST00000638041 CCDC144AA2RUR9 1427 aa10.42□□□□□ -0.74
MECP2-225ENST00000638041 SPHKAPQ2M3C7 1700 aa10.42□□□□□ -0.74
MECP2-225ENST00000638041 E9PCH4 1651 aa10.42□□□□□ -0.74
MECP2-225ENST00000638041 LTKP29376 864 aa10.42□□□□□ -0.74
MECP2-225ENST00000638041 MSH6P52701 1360 aa10.41□□□□□ -0.74
MECP2-225ENST00000638041 LTBP4Q8N2S1 1624 aa10.41□□□□□ -0.74
MECP2-225ENST00000638041 DIP2AQ14689 1571 aa10.41□□□□□ -0.74
MECP2-225ENST00000638041 NEURL4Q96JN8 1562 aa10.41□□□□□ -0.74
MECP2-225ENST00000638041 PIP4K2BP78356 416 aa10.41□□□□□ -0.74
MECP2-225ENST00000638041 STAC3Q96MF2 364 aa10.41□□□□□ -0.74
MECP2-225ENST00000638041 KIF1BO60333 1816 aa10.41□□□□□ -0.74
MECP2-225ENST00000638041 ATF3P18847 181 aa10.4□□□□□ -0.74
MECP2-225ENST00000638041 SLC26A8Q96RN1 970 aa10.4□□□□□ -0.74
MECP2-225ENST00000638041 MPHOSPH9Q99550 1183 aa10.4□□□□□ -0.74
MECP2-225ENST00000638041 NCOA3Q9Y6Q9 1424 aa10.4□□□□□ -0.75
MECP2-225ENST00000638041 TRPM2O94759 1503 aa10.39□□□□□ -0.75
MECP2-225ENST00000638041 NKTRP30414 1462 aaKnown RBP10.39□□□□□ -0.75
MECP2-225ENST00000638041 TMEM131LA2VDJ0 1609 aa10.38□□□□□ -0.75
MECP2-225ENST00000638041 CADPS2Q86UW7 1296 aa10.38□□□□□ -0.75
MECP2-225ENST00000638041 ANKRD30BQ9BXX2 1392 aa10.37□□□□□ -0.75
MECP2-225ENST00000638041 ZFYVE9O95405 1425 aa10.35□□□□□ -0.75
MECP2-225ENST00000638041 C19orf44Q9H6X5 657 aa10.35□□□□□ -0.75
MECP2-225ENST00000638041 LRRC7Q96NW7 1537 aa10.33□□□□□ -0.76
MECP2-225ENST00000638041 AMOTL2Q9Y2J4 779 aa10.33□□□□□ -0.76
MECP2-225ENST00000638041 RAB3GAP2Q9H2M9 1393 aa10.33□□□□□ -0.76
MECP2-225ENST00000638041 TMEM94Q12767 1356 aa10.32□□□□□ -0.76
MECP2-225ENST00000638041 RGL3Q3MIN7 710 aa10.32□□□□□ -0.76
MECP2-225ENST00000638041 NUTM2DQ5VT03 806 aaPredicted RBP10.32□□□□□ -0.76
MECP2-225ENST00000638041 MYO5BQ9ULV0 1848 aa10.3□□□□□ -0.76
MECP2-225ENST00000638041 SLAIN2Q9P270 581 aa10.3□□□□□ -0.76
MECP2-225ENST00000638041 NWD1Q149M9 1564 aa10.3□□□□□ -0.76
MECP2-225ENST00000638041 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
MECP2-225ENST00000638041 CLTCL1P53675 1640 aa10.29□□□□□ -0.76
MECP2-225ENST00000638041 DISP3Q9P2K9 1392 aa10.29□□□□□ -0.76
MECP2-225ENST00000638041 CHD2O14647 1828 aaKnown RBP10.29□□□□□ -0.76
MECP2-225ENST00000638041 FAM135BQ49AJ0 1406 aa10.29□□□□□ -0.76
MECP2-225ENST00000638041 DHX57Q6P158 1386 aaKnown RBP10.28□□□□□ -0.76
MECP2-225ENST00000638041 DCCP43146 1447 aa10.28□□□□□ -0.76
MECP2-225ENST00000638041 LRPPRCP42704 1394 aaKnown RBP10.26□□□□□ -0.77
MECP2-225ENST00000638041 PIAS4Q8N2W9 510 aaPredicted RBP10.26□□□□□ -0.77
MECP2-225ENST00000638041 NEXMIFQ5QGS0 1516 aa10.26□□□□□ -0.77
MECP2-225ENST00000638041 ADAMTS13Q76LX8 1427 aa10.25□□□□□ -0.77
MECP2-225ENST00000638041 HSPA1LP34931 641 aa10.25□□□□□ -0.77
MECP2-225ENST00000638041 TRIM26Q12899 539 aaPredicted RBP10.25□□□□□ -0.77
MECP2-225ENST00000638041 MEX3CQ5U5Q3 659 aaKnown RBP10.24□□□□□ -0.77
MECP2-225ENST00000638041 POGKQ9P215 609 aa10.24□□□□□ -0.77
MECP2-225ENST00000638041 EIF3AQ14152 1382 aaKnown RBP10.24□□□□□ -0.77
MECP2-225ENST00000638041 LAMC1P11047 1609 aa10.23□□□□□ -0.77
MECP2-225ENST00000638041 SIRT1Q96EB6 747 aa10.23□□□□□ -0.77
MECP2-225ENST00000638041 PTCH1Q13635 1447 aa10.23□□□□□ -0.77
MECP2-225ENST00000638041 PPLO60437 1756 aa10.22□□□□□ -0.77
MECP2-225ENST00000638041 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
MECP2-225ENST00000638041 LRRC59Q96AG4 307 aaKnown RBP10.22□□□□□ -0.77
MECP2-225ENST00000638041 ALKQ9UM73 1620 aa10.22□□□□□ -0.77
MECP2-225ENST00000638041 STRCP1A6NGW2 1772 aa10.21□□□□□ -0.77
MECP2-225ENST00000638041 SPATA31A6Q5VVP1 1343 aa10.21□□□□□ -0.78
MECP2-225ENST00000638041 JCADQ9P266 1359 aa10.21□□□□□ -0.78
MECP2-225ENST00000638041 ADGRL3Q9HAR2 1447 aa10.21□□□□□ -0.78
MECP2-225ENST00000638041 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
MECP2-225ENST00000638041 METP08581 1390 aa10.2□□□□□ -0.78
MECP2-225ENST00000638041 MYOM2P54296 1465 aa10.2□□□□□ -0.78
MECP2-225ENST00000638041 SPATA31E1Q6ZUB1 1445 aa10.2□□□□□ -0.78
MECP2-225ENST00000638041 STK26Q9P289 416 aa10.2□□□□□ -0.78
MECP2-225ENST00000638041 KDM2AQ9Y2K7 1162 aa10.2□□□□□ -0.78
MECP2-225ENST00000638041 ABCC11Q96J66 1382 aa10.19□□□□□ -0.78
MECP2-225ENST00000638041 PSME1Q06323 249 aa10.19□□□□□ -0.78
MECP2-225ENST00000638041 RBM33Q96EV2 1170 aaKnown RBP10.19□□□□□ -0.78
MECP2-225ENST00000638041 C14orf93Q9H972 538 aaKnown RBP10.19□□□□□ -0.78
MECP2-225ENST00000638041 ROBO1Q9Y6N7 1651 aa10.18□□□□□ -0.78
MECP2-225ENST00000638041 NPHP3Q7Z494 1330 aa10.18□□□□□ -0.78
MECP2-225ENST00000638041 XRN1Q8IZH2 1706 aaKnown RBP10.18□□□□□ -0.78
MECP2-225ENST00000638041 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.18□□□□□ -0.78
MECP2-225ENST00000638041 PIK3C2GO75747 1445 aa10.17□□□□□ -0.78
MECP2-225ENST00000638041 PRAG1Q86YV5 1406 aa10.17□□□□□ -0.78
MECP2-225ENST00000638041 ADGRF5Q8IZF2 1346 aa10.17□□□□□ -0.78
MECP2-225ENST00000638041 PHLPP1O60346 1717 aa10.17□□□□□ -0.78
MECP2-225ENST00000638041 HAP1P54257 671 aaPredicted RBP10.16□□□□□ -0.78
MECP2-225ENST00000638041 ESCO1Q5FWF5 840 aa10.16□□□□□ -0.78
MECP2-225ENST00000638041 ZNF772Q68DY9 489 aaPredicted RBP10.16□□□□□ -0.78
MECP2-225ENST00000638041 XIRP1Q702N8 1843 aaKnown RBP10.16□□□□□ -0.78
MECP2-225ENST00000638041 YTHDC2Q9H6S0 1430 aaKnown RBP10.16□□□□□ -0.78
MECP2-225ENST00000638041 NRXN3Q9Y4C0 1643 aa10.15□□□□□ -0.78
MECP2-225ENST00000638041 BRINP3Q76B58 766 aa10.15□□□□□ -0.78
MECP2-225ENST00000638041 TECPR2O15040 1411 aa10.15□□□□□ -0.79
MECP2-225ENST00000638041 PTPRUQ92729 1446 aa10.15□□□□□ -0.79
MECP2-225ENST00000638041 IFT172Q9UG01 1749 aa10.14□□□□□ -0.79
MECP2-225ENST00000638041 CFAP70Q5T0N1 1121 aa10.14□□□□□ -0.79
MECP2-225ENST00000638041 TMEM132EQ6IEE7 984 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms