RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 KIF7Q2M1P5 1343 aa8.72□□□□□ -1.01
CACNA1D-227ENST00000637844 ERVK-7P63135 1459 aa8.71□□□□□ -1.01
CACNA1D-227ENST00000637844 SETBP1Q9Y6X0 1596 aa8.71□□□□□ -1.02
CACNA1D-227ENST00000637844 ST20-MTHFSA0A0A6YYL1 179 aa8.71□□□□□ -1.02
CACNA1D-227ENST00000637844 SLC24A1O60721 1099 aa8.71□□□□□ -1.02
CACNA1D-227ENST00000637844 POLR3GLQ9BT43 218 aa8.71□□□□□ -1.02
CACNA1D-227ENST00000637844 SCAF11Q99590 1463 aaKnown RBP8.7□□□□□ -1.02
CACNA1D-227ENST00000637844 SPATA31D1Q6ZQQ2 1576 aa8.7□□□□□ -1.02
CACNA1D-227ENST00000637844 CCER2I3L3R5 266 aa8.7□□□□□ -1.02
CACNA1D-227ENST00000637844 MLECQ14165 292 aa8.7□□□□□ -1.02
CACNA1D-227ENST00000637844 NRXN1Q9ULB1 1477 aa8.7□□□□□ -1.02
CACNA1D-227ENST00000637844 TMEM131LA2VDJ0 1609 aa8.69□□□□□ -1.02
CACNA1D-227ENST00000637844 VGFO15240 615 aaPredicted RBP8.69□□□□□ -1.02
CACNA1D-227ENST00000637844 TMF1P82094 1093 aa8.69□□□□□ -1.02
CACNA1D-227ENST00000637844 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
CACNA1D-227ENST00000637844 YTHDC1Q96MU7 727 aaKnown RBP8.69□□□□□ -1.02
CACNA1D-227ENST00000637844 STAG3Q9UJ98 1225 aa8.69□□□□□ -1.02
CACNA1D-227ENST00000637844 NEXMIFQ5QGS0 1516 aa8.69□□□□□ -1.02
CACNA1D-227ENST00000637844 MYO5BQ9ULV0 1848 aa8.68□□□□□ -1.02
CACNA1D-227ENST00000637844 C11orf95C9JLR9 678 aaPredicted RBP8.68□□□□□ -1.02
CACNA1D-227ENST00000637844 CDCA8Q53HL2 280 aa8.68□□□□□ -1.02
CACNA1D-227ENST00000637844 FER1L4A9Z1Z3 1794 aa8.67□□□□□ -1.02
CACNA1D-227ENST00000637844 PIK3C2GO75747 1445 aa8.67□□□□□ -1.02
CACNA1D-227ENST00000637844 IDI1Q13907 227 aa8.67□□□□□ -1.02
CACNA1D-227ENST00000637844 KDM5AP29375 1690 aaKnown RBP8.66□□□□□ -1.02
CACNA1D-227ENST00000637844 MYO3AQ8NEV4 1616 aa8.66□□□□□ -1.02
CACNA1D-227ENST00000637844 ZFYVE9O95405 1425 aa8.66□□□□□ -1.02
CACNA1D-227ENST00000637844 ADGRF5Q8IZF2 1346 aa8.66□□□□□ -1.02
CACNA1D-227ENST00000637844 ZMYM3Q14202 1370 aa8.65□□□□□ -1.02
CACNA1D-227ENST00000637844 CFAP70Q5T0N1 1121 aa8.65□□□□□ -1.02
CACNA1D-227ENST00000637844 HDGFP51858 240 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-227ENST00000637844 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
CACNA1D-227ENST00000637844 C14orf93Q9H972 538 aaKnown RBP8.64□□□□□ -1.03
CACNA1D-227ENST00000637844 KTN1Q86UP2 1357 aaKnown RBP8.63□□□□□ -1.03
CACNA1D-227ENST00000637844 TNRQ92752 1358 aa8.63□□□□□ -1.03
CACNA1D-227ENST00000637844 QRICH2Q9H0J4 1663 aa8.63□□□□□ -1.03
CACNA1D-227ENST00000637844 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.03
CACNA1D-227ENST00000637844 C3P01024 1663 aa8.62□□□□□ -1.03
CACNA1D-227ENST00000637844 TESK2Q96S53 571 aa8.62□□□□□ -1.03
CACNA1D-227ENST00000637844 A2ML1A8K2U0 1454 aa8.62□□□□□ -1.03
CACNA1D-227ENST00000637844 DISP3Q9P2K9 1392 aa8.61□□□□□ -1.03
CACNA1D-227ENST00000637844 ADGRB1O14514 1584 aa8.61□□□□□ -1.03
CACNA1D-227ENST00000637844 CENPJQ9HC77 1338 aaPredicted RBP8.61□□□□□ -1.03
CACNA1D-227ENST00000637844 UBR1Q8IWV7 1749 aa8.61□□□□□ -1.03
CACNA1D-227ENST00000637844 ARHGEF28Q8N1W1 1705 aaKnown RBP8.61□□□□□ -1.03
CACNA1D-227ENST00000637844 PRKRIP1Q9H875 184 aaPredicted RBP8.61□□□□□ -1.03
CACNA1D-227ENST00000637844 NLRP1Q9C000 1473 aa8.61□□□□□ -1.03
CACNA1D-227ENST00000637844 RIMS2Q9UQ26 1411 aa8.61□□□□□ -1.03
CACNA1D-227ENST00000637844 SBNO2Q9Y2G9 1366 aa8.61□□□□□ -1.03
CACNA1D-227ENST00000637844 RALBP1Q15311 655 aa8.59□□□□□ -1.03
CACNA1D-227ENST00000637844 NUTM2DQ5VT03 806 aaPredicted RBP8.59□□□□□ -1.03
CACNA1D-227ENST00000637844 TRAK1Q9UPV9 953 aa8.59□□□□□ -1.03
CACNA1D-227ENST00000637844 ALKQ9UM73 1620 aa8.58□□□□□ -1.04
CACNA1D-227ENST00000637844 MYOM1P52179 1685 aa8.58□□□□□ -1.04
CACNA1D-227ENST00000637844 RIMS1Q86UR5 1692 aaKnown RBP8.57□□□□□ -1.04
CACNA1D-227ENST00000637844 TMEM132EQ6IEE7 984 aa8.57□□□□□ -1.04
CACNA1D-227ENST00000637844 MRS2Q9HD23 443 aa8.57□□□□□ -1.04
CACNA1D-227ENST00000637844 EVC2Q86UK5 1308 aa8.56□□□□□ -1.04
CACNA1D-227ENST00000637844 YTHDC2Q9H6S0 1430 aaKnown RBP8.56□□□□□ -1.04
CACNA1D-227ENST00000637844 BCANQ96GW7 911 aa8.56□□□□□ -1.04
CACNA1D-227ENST00000637844 PANK3Q9H999 370 aa8.56□□□□□ -1.04
CACNA1D-227ENST00000637844 KNSTRNQ9Y448 316 aa8.56□□□□□ -1.04
CACNA1D-227ENST00000637844 MYBBP1AQ9BQG0 1328 aaKnown RBP8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 ASXL1Q8IXJ9 1541 aa8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 DLC1Q96QB1 1528 aa8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 SETD1AO15047 1707 aaKnown RBP8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 KNDC1Q76NI1 1749 aa8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 CNGB1Q14028 1251 aaPredicted RBP8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 PUS7Q96PZ0 661 aaKnown RBP8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 POGKQ9P215 609 aa8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 EID1Q9Y6B2 187 aa8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 TMEM2Q9UHN6 1383 aa8.55□□□□□ -1.04
CACNA1D-227ENST00000637844 TMC1Q8TDI8 760 aa8.54□□□□□ -1.04
CACNA1D-227ENST00000637844 STK26Q9P289 416 aa8.54□□□□□ -1.04
CACNA1D-227ENST00000637844 NRXN3Q9Y4C0 1643 aa8.54□□□□□ -1.04
CACNA1D-227ENST00000637844 ADAMTSL3P82987 1691 aa8.53□□□□□ -1.04
CACNA1D-227ENST00000637844 PTPRMP28827 1452 aa8.53□□□□□ -1.04
CACNA1D-227ENST00000637844 BRD4O60885 1362 aaPredicted RBP8.53□□□□□ -1.04
CACNA1D-227ENST00000637844 LRPPRCP42704 1394 aaKnown RBP8.53□□□□□ -1.04
CACNA1D-227ENST00000637844 PLPPR3Q6T4P5 718 aa8.53□□□□□ -1.04
CACNA1D-227ENST00000637844 THEMISQ8N1K5 641 aaPredicted RBP8.53□□□□□ -1.04
CACNA1D-227ENST00000637844 PARD3Q8TEW0 1356 aa8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 NINLQ9Y2I6 1382 aa8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 PER1O15534 1290 aaPredicted RBP8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 CEBPAP49715 358 aaPredicted RBP8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 NLRP13Q86W25 1043 aa8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 FAM9BQ8IZU0 186 aa8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 SLIT1O75093 1534 aa8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 ZNF142P52746 1687 aaPredicted RBP8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 DIP2AQ14689 1571 aa8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 CEP170BQ9Y4F5 1589 aaPredicted RBP8.52□□□□□ -1.05
CACNA1D-227ENST00000637844 PLEKHG1Q9ULL1 1385 aa8.51□□□□□ -1.05
CACNA1D-227ENST00000637844 TULP4Q9NRJ4 1543 aa8.51□□□□□ -1.05
CACNA1D-227ENST00000637844 HNRNPUQ00839 825 aaKnown RBP eCLIP8.51□□□□□ -1.05
CACNA1D-227ENST00000637844 CC2D1BQ5T0F9 858 aaKnown RBP8.51□□□□□ -1.05
CACNA1D-227ENST00000637844 PRAM1Q96QH2 718 aa8.51□□□□□ -1.05
CACNA1D-227ENST00000637844 SENP3Q9H4L4 574 aaPredicted RBP8.51□□□□□ -1.05
CACNA1D-227ENST00000637844 USP32Q8NFA0 1604 aa8.51□□□□□ -1.05
CACNA1D-227ENST00000637844 ATAD2Q6PL18 1390 aa8.5□□□□□ -1.05
CACNA1D-227ENST00000637844 ABCC11Q96J66 1382 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms