RNA–Protein interactions for RNA: ENST00000637832.1

CACNA1A-252, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-252ENST00000637832 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.55■□□□□ 0.4
CACNA1A-252ENST00000637832 EID1Q9Y6B2 187 aa17.55■□□□□ 0.4
CACNA1A-252ENST00000637832 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-252ENST00000637832 NEXMIFQ5QGS0 1516 aa17.54■□□□□ 0.4
CACNA1A-252ENST00000637832 ARHGAP23Q9P227 1491 aa17.54■□□□□ 0.4
CACNA1A-252ENST00000637832 RIMS2Q9UQ26 1411 aa17.54■□□□□ 0.4
CACNA1A-252ENST00000637832 PPP1R15AO75807 674 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-252ENST00000637832 TIMELESSQ9UNS1 1208 aa17.53■□□□□ 0.4
CACNA1A-252ENST00000637832 STAC3Q96MF2 364 aa17.52■□□□□ 0.4
CACNA1A-252ENST00000637832 SCAF11Q99590 1463 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-252ENST00000637832 ZFYVE9O95405 1425 aa17.51■□□□□ 0.39
CACNA1A-252ENST00000637832 ANKLE2Q86XL3 938 aa17.51■□□□□ 0.39
CACNA1A-252ENST00000637832 MYOM2P54296 1465 aa17.5■□□□□ 0.39
CACNA1A-252ENST00000637832 VGFO15240 615 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-252ENST00000637832 TXNDC2Q86VQ3 553 aa17.49■□□□□ 0.39
CACNA1A-252ENST00000637832 DCAF11Q8TEB1 546 aa17.49■□□□□ 0.39
CACNA1A-252ENST00000637832 HSPA2P54652 639 aa17.48■□□□□ 0.39
CACNA1A-252ENST00000637832 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
CACNA1A-252ENST00000637832 BCANQ96GW7 911 aa17.45■□□□□ 0.38
CACNA1A-252ENST00000637832 KDM2AQ9Y2K7 1162 aa17.45■□□□□ 0.38
CACNA1A-252ENST00000637832 LAMC1P11047 1609 aa17.45■□□□□ 0.38
CACNA1A-252ENST00000637832 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
CACNA1A-252ENST00000637832 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
CACNA1A-252ENST00000637832 NUTM2DQ5VT03 806 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-252ENST00000637832 SETBP1Q9Y6X0 1596 aa17.43■□□□□ 0.38
CACNA1A-252ENST00000637832 MED14O60244 1454 aa17.43■□□□□ 0.38
CACNA1A-252ENST00000637832 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
CACNA1A-252ENST00000637832 DIP2AQ14689 1571 aa17.42■□□□□ 0.38
CACNA1A-252ENST00000637832 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-252ENST00000637832 LTKP29376 864 aa17.42■□□□□ 0.38
CACNA1A-252ENST00000637832 STRCQ7RTU9 1775 aa17.42■□□□□ 0.38
CACNA1A-252ENST00000637832 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
CACNA1A-252ENST00000637832 ZEB1P37275 1124 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-252ENST00000637832 NCKAP5LQ9HCH0 1330 aa17.41■□□□□ 0.38
CACNA1A-252ENST00000637832 PRAG1Q86YV5 1406 aa17.4■□□□□ 0.38
CACNA1A-252ENST00000637832 KIAA1210Q9ULL0 1709 aa17.4■□□□□ 0.38
CACNA1A-252ENST00000637832 ADGRF5Q8IZF2 1346 aa17.4■□□□□ 0.38
CACNA1A-252ENST00000637832 DMRT2Q9Y5R5 561 aa17.39■□□□□ 0.37
CACNA1A-252ENST00000637832 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
CACNA1A-252ENST00000637832 ALKQ9UM73 1620 aa17.36■□□□□ 0.37
CACNA1A-252ENST00000637832 TRPM1Q7Z4N2 1603 aa17.36■□□□□ 0.37
CACNA1A-252ENST00000637832 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-252ENST00000637832 SETD1AO15047 1707 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-252ENST00000637832 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.36
CACNA1A-252ENST00000637832 RALGAPBQ86X10 1494 aa17.32■□□□□ 0.36
CACNA1A-252ENST00000637832 SLC26A8Q96RN1 970 aa17.32■□□□□ 0.36
CACNA1A-252ENST00000637832 C14orf93Q9H972 538 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-252ENST00000637832 TBX22Q9Y458 520 aa17.32■□□□□ 0.36
CACNA1A-252ENST00000637832 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
CACNA1A-252ENST00000637832 ROCK2O75116 1388 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-252ENST00000637832 CFAP70Q5T0N1 1121 aa17.3■□□□□ 0.36
CACNA1A-252ENST00000637832 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
CACNA1A-252ENST00000637832 ADGRB1O14514 1584 aa17.27■□□□□ 0.35
CACNA1A-252ENST00000637832 ASXL1Q8IXJ9 1541 aa17.26■□□□□ 0.35
CACNA1A-252ENST00000637832 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-252ENST00000637832 KNDC1Q76NI1 1749 aa17.26■□□□□ 0.35
CACNA1A-252ENST00000637832 METP08581 1390 aa17.26■□□□□ 0.35
CACNA1A-252ENST00000637832 NWD1Q149M9 1564 aa17.25■□□□□ 0.35
CACNA1A-252ENST00000637832 YTHDC2Q9H6S0 1430 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-252ENST00000637832 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-252ENST00000637832 CARD11Q9BXL7 1154 aa17.24■□□□□ 0.35
CACNA1A-252ENST00000637832 LRPPRCP42704 1394 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-252ENST00000637832 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
CACNA1A-252ENST00000637832 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
CACNA1A-252ENST00000637832 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-252ENST00000637832 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-252ENST00000637832 NBPF1Q3BBV0 1214 aa17.22■□□□□ 0.35
CACNA1A-252ENST00000637832 CPS1P31327 1500 aa17.21■□□□□ 0.35
CACNA1A-252ENST00000637832 KCNA6P17658 529 aa17.21■□□□□ 0.35
CACNA1A-252ENST00000637832 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
CACNA1A-252ENST00000637832 DLC1Q96QB1 1528 aa17.21■□□□□ 0.34
CACNA1A-252ENST00000637832 TECPR2O15040 1411 aa17.21■□□□□ 0.34
CACNA1A-252ENST00000637832 PTCH1Q13635 1447 aa17.21■□□□□ 0.34
CACNA1A-252ENST00000637832 ABCC11Q96J66 1382 aa17.2■□□□□ 0.34
CACNA1A-252ENST00000637832 STK26Q9P289 416 aa17.2■□□□□ 0.34
CACNA1A-252ENST00000637832 ARHGEF28Q8N1W1 1705 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-252ENST00000637832 PTPRUQ92729 1446 aa17.19■□□□□ 0.34
CACNA1A-252ENST00000637832 TRAK1Q9UPV9 953 aa17.18■□□□□ 0.34
CACNA1A-252ENST00000637832 FAM135BQ49AJ0 1406 aa17.17■□□□□ 0.34
CACNA1A-252ENST00000637832 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
CACNA1A-252ENST00000637832 ZNF335Q9H4Z2 1342 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-252ENST00000637832 USP47Q96K76 1375 aa17.15■□□□□ 0.34
CACNA1A-252ENST00000637832 SIRT1Q96EB6 747 aa17.15■□□□□ 0.34
CACNA1A-252ENST00000637832 POGKQ9P215 609 aa17.15■□□□□ 0.34
CACNA1A-252ENST00000637832 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
CACNA1A-252ENST00000637832 EIF4G2P78344 907 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNA1A-252ENST00000637832 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-252ENST00000637832 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-252ENST00000637832 ROBO2Q9HCK4 1378 aa17.13■□□□□ 0.33
CACNA1A-252ENST00000637832 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
CACNA1A-252ENST00000637832 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
CACNA1A-252ENST00000637832 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
CACNA1A-252ENST00000637832 NCOA3Q9Y6Q9 1424 aa17.1■□□□□ 0.33
CACNA1A-252ENST00000637832 LTBP4Q8N2S1 1624 aa17.1■□□□□ 0.33
CACNA1A-252ENST00000637832 LRRC7Q96NW7 1537 aa17.09■□□□□ 0.33
CACNA1A-252ENST00000637832 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
CACNA1A-252ENST00000637832 TMEM94Q12767 1356 aa17.08■□□□□ 0.32
CACNA1A-252ENST00000637832 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
CACNA1A-252ENST00000637832 WAPLQ7Z5K2 1190 aa17.08■□□□□ 0.32
CACNA1A-252ENST00000637832 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms