RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	SCAF11	Q99590	1463 aa	Known RBP	32.54	■■■□□ 2.8
CHRNA7-231	ENST00000637786	EID1	Q9Y6B2	187 aa		32.54	■■■□□ 2.8
CHRNA7-231	ENST00000637786	NEXMIF	Q5QGS0	1516 aa		32.54	■■■□□ 2.8
CHRNA7-231	ENST00000637786	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
CHRNA7-231	ENST00000637786	CCER1	Q8TC90	406 aa	Predicted RBP	32.53	■■■□□ 2.8
CHRNA7-231	ENST00000637786	PPL	O60437	1756 aa		32.52	■■■□□ 2.8
CHRNA7-231	ENST00000637786	SIN3A	Q96ST3	1273 aa		32.51	■■■□□ 2.79
CHRNA7-231	ENST00000637786	IFT172	Q9UG01	1749 aa		32.51	■■■□□ 2.79
CHRNA7-231	ENST00000637786	TXNDC2	Q86VQ3	553 aa		32.5	■■■□□ 2.79
CHRNA7-231	ENST00000637786	MED14	O60244	1454 aa		32.49	■■■□□ 2.79
CHRNA7-231	ENST00000637786	RGL3	Q3MIN7	710 aa		32.49	■■■□□ 2.79
CHRNA7-231	ENST00000637786	LTK	P29376	864 aa		32.48	■■■□□ 2.79
CHRNA7-231	ENST00000637786	NCKAP5L	Q9HCH0	1330 aa		32.45	■■■□□ 2.78
CHRNA7-231	ENST00000637786	NEUROD1	Q13562	356 aa		32.44	■■■□□ 2.78
CHRNA7-231	ENST00000637786	VGF	O15240	615 aa	Predicted RBP	32.43	■■■□□ 2.78
CHRNA7-231	ENST00000637786	STAC3	Q96MF2	364 aa		32.43	■■■□□ 2.78
CHRNA7-231	ENST00000637786	PPP1R15A	O75807	674 aa	Predicted RBP	32.42	■■■□□ 2.78
CHRNA7-231	ENST00000637786	PLEKHG1	Q9ULL1	1385 aa		32.42	■■■□□ 2.78
CHRNA7-231	ENST00000637786	IQGAP1	P46940	1657 aa		32.41	■■■□□ 2.78
CHRNA7-231	ENST00000637786	NPHP4	O75161	1426 aa	Predicted RBP	32.41	■■■□□ 2.78
CHRNA7-231	ENST00000637786	MYOM2	P54296	1465 aa		32.41	■■■□□ 2.78
CHRNA7-231	ENST00000637786	DMRT2	Q9Y5R5	561 aa		32.4	■■■□□ 2.78
CHRNA7-231	ENST00000637786	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.36	■■■□□ 2.77
CHRNA7-231	ENST00000637786	SETBP1	Q9Y6X0	1596 aa		32.35	■■■□□ 2.77
CHRNA7-231	ENST00000637786	NRXN1	Q9ULB1	1477 aa		32.34	■■■□□ 2.77
CHRNA7-231	ENST00000637786	TONSL	Q96HA7	1378 aa		32.33	■■■□□ 2.77
CHRNA7-231	ENST00000637786	DCAF11	Q8TEB1	546 aa		32.33	■■■□□ 2.77
CHRNA7-231	ENST00000637786	L3MBTL2	Q969R5	705 aa		32.32	■■■□□ 2.76
CHRNA7-231	ENST00000637786	NRXN3	Q9Y4C0	1643 aa		32.3	■■■□□ 2.76
CHRNA7-231	ENST00000637786	DIP2A	Q14689	1571 aa		32.3	■■■□□ 2.76
CHRNA7-231	ENST00000637786	TIMELESS	Q9UNS1	1208 aa		32.3	■■■□□ 2.76
CHRNA7-231	ENST00000637786	ADGRF5	Q8IZF2	1346 aa		32.29	■■■□□ 2.76
CHRNA7-231	ENST00000637786	PIK3C2G	O75747	1445 aa		32.28	■■■□□ 2.76
CHRNA7-231	ENST00000637786	ADAMTS13	Q76LX8	1427 aa		32.26	■■■□□ 2.76
CHRNA7-231	ENST00000637786	BCAN	Q96GW7	911 aa		32.25	■■■□□ 2.75
CHRNA7-231	ENST00000637786	KDM2A	Q9Y2K7	1162 aa		32.25	■■■□□ 2.75
CHRNA7-231	ENST00000637786	TBX22	Q9Y458	520 aa		32.24	■■■□□ 2.75
CHRNA7-231	ENST00000637786	LAMC1	P11047	1609 aa		32.22	■■■□□ 2.75
CHRNA7-231	ENST00000637786	ALK	Q9UM73	1620 aa		32.21	■■■□□ 2.75
CHRNA7-231	ENST00000637786	SETD1A	O15047	1707 aa	Known RBP	32.2	■■■□□ 2.75
CHRNA7-231	ENST00000637786	SLC26A8	Q96RN1	970 aa		32.2	■■■□□ 2.75
CHRNA7-231	ENST00000637786	PRAG1	Q86YV5	1406 aa		32.19	■■■□□ 2.74
CHRNA7-231	ENST00000637786	PIK3R4	Q99570	1358 aa		32.17	■■■□□ 2.74
CHRNA7-231	ENST00000637786	KIAA1210	Q9ULL0	1709 aa		32.16	■■■□□ 2.74
CHRNA7-231	ENST00000637786	SENP3	Q9H4L4	574 aa	Predicted RBP	32.15	■■■□□ 2.74
CHRNA7-231	ENST00000637786	C14orf93	Q9H972	538 aa	Known RBP	32.15	■■■□□ 2.74
CHRNA7-231	ENST00000637786	CHD2	O14647	1828 aa	Known RBP	32.12	■■■□□ 2.73
CHRNA7-231	ENST00000637786	MET	P08581	1390 aa		32.09	■■■□□ 2.73
CHRNA7-231	ENST00000637786	NWD1	Q149M9	1564 aa		32.08	■■■□□ 2.73
CHRNA7-231	ENST00000637786	CFAP70	Q5T0N1	1121 aa		32.08	■■■□□ 2.73
CHRNA7-231	ENST00000637786	ASXL1	Q8IXJ9	1541 aa		32.05	■■■□□ 2.72
CHRNA7-231	ENST00000637786	TRPM1	Q7Z4N2	1603 aa		32.05	■■■□□ 2.72
CHRNA7-231	ENST00000637786	KCNA6	P17658	529 aa		32.05	■■■□□ 2.72
CHRNA7-231	ENST00000637786	ADGRB1	O14514	1584 aa		32.04	■■■□□ 2.72
CHRNA7-231	ENST00000637786	XRN1	Q8IZH2	1706 aa	Known RBP	32.03	■■■□□ 2.72
CHRNA7-231	ENST00000637786	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.03	■■■□□ 2.72
CHRNA7-231	ENST00000637786	NBPF8	Q3BBV2	869 aa		32.03	■■■□□ 2.72
CHRNA7-231	ENST00000637786	STRCP1	A6NGW2	1772 aa		32.03	■■■□□ 2.72
CHRNA7-231	ENST00000637786	PTPRU	Q92729	1446 aa		32.02	■■■□□ 2.72
CHRNA7-231	ENST00000637786	NKTR	P30414	1462 aa	Known RBP	32	■■■□□ 2.71
CHRNA7-231	ENST00000637786	CPS1	P31327	1500 aa		32	■■■□□ 2.71
CHRNA7-231	ENST00000637786	LTBP4	Q8N2S1	1624 aa		31.99	■■■□□ 2.71
CHRNA7-231	ENST00000637786	LRPPRC	P42704	1394 aa	Known RBP	31.98	■■■□□ 2.71
CHRNA7-231	ENST00000637786	RALGAPB	Q86X10	1494 aa		31.97	■■■□□ 2.71
CHRNA7-231	ENST00000637786	TMEM132E	Q6IEE7	984 aa		31.97	■■■□□ 2.71
CHRNA7-231	ENST00000637786	AMOTL2	Q9Y2J4	779 aa		31.97	■■■□□ 2.71
CHRNA7-231	ENST00000637786	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.97	■■■□□ 2.71
CHRNA7-231	ENST00000637786	KNDC1	Q76NI1	1749 aa		31.97	■■■□□ 2.71
CHRNA7-231	ENST00000637786	TECPR2	O15040	1411 aa		31.96	■■■□□ 2.71
CHRNA7-231	ENST00000637786	ABCC11	Q96J66	1382 aa		31.95	■■■□□ 2.71
CHRNA7-231	ENST00000637786	NBPF1	Q3BBV0	1214 aa		31.93	■■■□□ 2.7
CHRNA7-231	ENST00000637786	GPRASP1	Q5JY77	1395 aa		31.93	■■■□□ 2.7
CHRNA7-231	ENST00000637786	PTCH1	Q13635	1447 aa		31.92	■■■□□ 2.7
CHRNA7-231	ENST00000637786	ROCK2	O75116	1388 aa	Known RBP	31.92	■■■□□ 2.7
CHRNA7-231	ENST00000637786	DLC1	Q96QB1	1528 aa		31.9	■■■□□ 2.7
CHRNA7-231	ENST00000637786	SIRT1	Q96EB6	747 aa		31.87	■■■□□ 2.69
CHRNA7-231	ENST00000637786	LRRC7	Q96NW7	1537 aa		31.86	■■■□□ 2.69
CHRNA7-231	ENST00000637786	STK26	Q9P289	416 aa		31.86	■■■□□ 2.69
CHRNA7-231	ENST00000637786	FAM135B	Q49AJ0	1406 aa		31.85	■■■□□ 2.69
CHRNA7-231	ENST00000637786	ROBO2	Q9HCK4	1378 aa		31.84	■■■□□ 2.69
CHRNA7-231	ENST00000637786	NCOA3	Q9Y6Q9	1424 aa		31.83	■■■□□ 2.69
CHRNA7-231	ENST00000637786	PROSER2	Q86WR7	435 aa	Predicted RBP	31.83	■■■□□ 2.69
CHRNA7-231	ENST00000637786	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.82	■■■□□ 2.68
CHRNA7-231	ENST00000637786	XIRP1	Q702N8	1843 aa	Known RBP	31.81	■■■□□ 2.68
CHRNA7-231	ENST00000637786	TRAK1	Q9UPV9	953 aa		31.8	■■■□□ 2.68
CHRNA7-231	ENST00000637786	TMEM94	Q12767	1356 aa		31.8	■■■□□ 2.68
CHRNA7-231	ENST00000637786	CARD11	Q9BXL7	1154 aa		31.79	■■■□□ 2.68
CHRNA7-231	ENST00000637786	IQSEC2	Q5JU85	1478 aa		31.78	■■■□□ 2.68
CHRNA7-231	ENST00000637786	ZEB1	P37275	1124 aa	Predicted RBP	31.76	■■■□□ 2.67
CHRNA7-231	ENST00000637786	EIF3A	Q14152	1382 aa	Known RBP	31.73	■■■□□ 2.67
CHRNA7-231	ENST00000637786	PRAM1	Q96QH2	718 aa		31.73	■■■□□ 2.67
CHRNA7-231	ENST00000637786	PLEKHH1	Q9ULM0	1364 aa		31.71	■■■□□ 2.67
CHRNA7-231	ENST00000637786	WAPL	Q7Z5K2	1190 aa		31.71	■■■□□ 2.67
CHRNA7-231	ENST00000637786	CERK	Q8TCT0	537 aa		31.71	■■■□□ 2.67
CHRNA7-231	ENST00000637786	POGK	Q9P215	609 aa		31.71	■■■□□ 2.67
CHRNA7-231	ENST00000637786	ADGRL3	Q9HAR2	1447 aa		31.71	■■■□□ 2.67
CHRNA7-231	ENST00000637786	NALCN	Q8IZF0	1738 aa		31.69	■■■□□ 2.66
CHRNA7-231	ENST00000637786	RBM33	Q96EV2	1170 aa	Known RBP	31.68	■■■□□ 2.66
CHRNA7-231	ENST00000637786	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.68	■■■□□ 2.66
CHRNA7-231	ENST00000637786	C19orf44	Q9H6X5	657 aa		31.66	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms