RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 PTPN23Q9H3S7 1636 aa12.9□□□□□ -0.34
SMARCA2-260ENST00000637352 PHLPP1O60346 1717 aa12.9□□□□□ -0.34
SMARCA2-260ENST00000637352 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
SMARCA2-260ENST00000637352 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
SMARCA2-260ENST00000637352 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
SMARCA2-260ENST00000637352 ANKRD30AQ9BXX3 1397 aa12.89□□□□□ -0.35
SMARCA2-260ENST00000637352 NOS1P29475 1434 aa12.88□□□□□ -0.35
SMARCA2-260ENST00000637352 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMARCA2-260ENST00000637352 SLC52A1Q9NWF4 448 aa12.88□□□□□ -0.35
SMARCA2-260ENST00000637352 LRP6O75581 1613 aa12.88□□□□□ -0.35
SMARCA2-260ENST00000637352 ADGRB3O60242 1522 aa12.88□□□□□ -0.35
SMARCA2-260ENST00000637352 CROCC2H7BZ55 1655 aa12.87□□□□□ -0.35
SMARCA2-260ENST00000637352 NKTRP30414 1462 aaKnown RBP12.87□□□□□ -0.35
SMARCA2-260ENST00000637352 FAM50AQ14320 339 aaKnown RBP12.87□□□□□ -0.35
SMARCA2-260ENST00000637352 RIMS2Q9UQ26 1411 aa12.87□□□□□ -0.35
SMARCA2-260ENST00000637352 LMTK2Q8IWU2 1503 aa12.86□□□□□ -0.35
SMARCA2-260ENST00000637352 FGD6Q6ZV73 1430 aa12.86□□□□□ -0.35
SMARCA2-260ENST00000637352 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
SMARCA2-260ENST00000637352 PLEKHG1Q9ULL1 1385 aa12.85□□□□□ -0.35
SMARCA2-260ENST00000637352 ZNF772Q68DY9 489 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-260ENST00000637352 ATF3P18847 181 aa12.84□□□□□ -0.35
SMARCA2-260ENST00000637352 ZFYVE9O95405 1425 aa12.84□□□□□ -0.35
SMARCA2-260ENST00000637352 RXRBP28702 533 aa12.83□□□□□ -0.36
SMARCA2-260ENST00000637352 HDGFP51858 240 aaKnown RBP12.83□□□□□ -0.36
SMARCA2-260ENST00000637352 TBX22Q9Y458 520 aa12.83□□□□□ -0.36
SMARCA2-260ENST00000637352 COL16A1Q07092 1604 aaPredicted RBP12.83□□□□□ -0.36
SMARCA2-260ENST00000637352 SPATA31A6Q5VVP1 1343 aa12.83□□□□□ -0.36
SMARCA2-260ENST00000637352 CADPS2Q86UW7 1296 aa12.82□□□□□ -0.36
SMARCA2-260ENST00000637352 KDM5AP29375 1690 aaKnown RBP12.82□□□□□ -0.36
SMARCA2-260ENST00000637352 C19orf44Q9H6X5 657 aa12.81□□□□□ -0.36
SMARCA2-260ENST00000637352 AMOTL2Q9Y2J4 779 aa12.81□□□□□ -0.36
SMARCA2-260ENST00000637352 BRINP3Q76B58 766 aa12.8□□□□□ -0.36
SMARCA2-260ENST00000637352 DDX17Q92841 729 aaKnown RBP12.8□□□□□ -0.36
SMARCA2-260ENST00000637352 MYO5BQ9ULV0 1848 aa12.8□□□□□ -0.36
SMARCA2-260ENST00000637352 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
SMARCA2-260ENST00000637352 ANKRD50Q9ULJ7 1429 aa12.79□□□□□ -0.36
SMARCA2-260ENST00000637352 CHD2O14647 1828 aaKnown RBP12.79□□□□□ -0.36
SMARCA2-260ENST00000637352 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCA2-260ENST00000637352 AFF2P51816 1311 aa12.79□□□□□ -0.36
SMARCA2-260ENST00000637352 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
SMARCA2-260ENST00000637352 C8orf37Q96NL8 207 aa12.78□□□□□ -0.36
SMARCA2-260ENST00000637352 PTPRUQ92729 1446 aa12.77□□□□□ -0.37
SMARCA2-260ENST00000637352 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.37
SMARCA2-260ENST00000637352 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-260ENST00000637352 RPRD2Q5VT52 1461 aaKnown RBP12.76□□□□□ -0.37
SMARCA2-260ENST00000637352 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
SMARCA2-260ENST00000637352 AHDC1Q5TGY3 1603 aaPredicted RBP12.75□□□□□ -0.37
SMARCA2-260ENST00000637352 QTRT2Q9H974 415 aaKnown RBP12.75□□□□□ -0.37
SMARCA2-260ENST00000637352 NCOA3Q9Y6Q9 1424 aa12.75□□□□□ -0.37
SMARCA2-260ENST00000637352 ITGAEP38570 1179 aa12.74□□□□□ -0.37
SMARCA2-260ENST00000637352 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
SMARCA2-260ENST00000637352 ZNF326Q5BKZ1 582 aaKnown RBP12.73□□□□□ -0.37
SMARCA2-260ENST00000637352 SHPRHQ149N8 1683 aa12.72□□□□□ -0.37
SMARCA2-260ENST00000637352 DIP2AQ14689 1571 aa12.72□□□□□ -0.37
SMARCA2-260ENST00000637352 RGS12O14924 1447 aa12.71□□□□□ -0.37
SMARCA2-260ENST00000637352 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
SMARCA2-260ENST00000637352 LRRC59Q96AG4 307 aaKnown RBP12.71□□□□□ -0.37
SMARCA2-260ENST00000637352 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
SMARCA2-260ENST00000637352 NUP155O75694 1391 aa12.7□□□□□ -0.38
SMARCA2-260ENST00000637352 RBM6P78332 1123 aaKnown RBP12.7□□□□□ -0.38
SMARCA2-260ENST00000637352 NGLY1Q96IV0 654 aa12.7□□□□□ -0.38
SMARCA2-260ENST00000637352 TRPM2O94759 1503 aa12.7□□□□□ -0.38
SMARCA2-260ENST00000637352 MST1RQ04912 1400 aa12.7□□□□□ -0.38
SMARCA2-260ENST00000637352 METP08581 1390 aa12.69□□□□□ -0.38
SMARCA2-260ENST00000637352 E9PCH4 1651 aa12.69□□□□□ -0.38
SMARCA2-260ENST00000637352 SETD5Q9C0A6 1442 aa12.69□□□□□ -0.38
SMARCA2-260ENST00000637352 PNPLA6Q8IY17 1366 aa12.68□□□□□ -0.38
SMARCA2-260ENST00000637352 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-260ENST00000637352 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
SMARCA2-260ENST00000637352 UNC13BO14795 1591 aa12.66□□□□□ -0.38
SMARCA2-260ENST00000637352 ORAI2Q96SN7 254 aa12.66□□□□□ -0.38
SMARCA2-260ENST00000637352 USP21Q9UK80 565 aa12.65□□□□□ -0.38
SMARCA2-260ENST00000637352 DCCP43146 1447 aa12.64□□□□□ -0.39
SMARCA2-260ENST00000637352 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
SMARCA2-260ENST00000637352 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
SMARCA2-260ENST00000637352 NHSL1Q5SYE7 1610 aa12.62□□□□□ -0.39
SMARCA2-260ENST00000637352 SRCAPQ6ZRS2 3230 aa12.62□□□□□ -0.39
SMARCA2-260ENST00000637352 XRN1Q8IZH2 1706 aaKnown RBP12.62□□□□□ -0.39
SMARCA2-260ENST00000637352 C1orf167Q5SNV9 1468 aa12.61□□□□□ -0.39
SMARCA2-260ENST00000637352 IQGAP3Q86VI3 1631 aa12.61□□□□□ -0.39
SMARCA2-260ENST00000637352 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
SMARCA2-260ENST00000637352 ATAD2Q6PL18 1390 aa12.6□□□□□ -0.39
SMARCA2-260ENST00000637352 XPCQ01831 940 aaPredicted RBP12.6□□□□□ -0.39
SMARCA2-260ENST00000637352 TRPC5Q9UL62 973 aaPredicted RBP12.6□□□□□ -0.39
SMARCA2-260ENST00000637352 SETBP1Q9Y6X0 1596 aa12.6□□□□□ -0.39
SMARCA2-260ENST00000637352 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
SMARCA2-260ENST00000637352 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.4
SMARCA2-260ENST00000637352 NUTM2FA1L443 756 aa12.58□□□□□ -0.4
SMARCA2-260ENST00000637352 NALCNQ8IZF0 1738 aa12.58□□□□□ -0.4
SMARCA2-260ENST00000637352 SOS2Q07890 1332 aaPredicted RBP12.58□□□□□ -0.4
SMARCA2-260ENST00000637352 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
SMARCA2-260ENST00000637352 ESCO1Q5FWF5 840 aa12.57□□□□□ -0.4
SMARCA2-260ENST00000637352 FNBP4Q8N3X1 1017 aaPredicted RBP12.56□□□□□ -0.4
SMARCA2-260ENST00000637352 NEXMIFQ5QGS0 1516 aa12.55□□□□□ -0.4
SMARCA2-260ENST00000637352 ATRNO75882 1429 aa12.54□□□□□ -0.4
SMARCA2-260ENST00000637352 FOXO3O43524 673 aa12.54□□□□□ -0.4
SMARCA2-260ENST00000637352 CLTCL1P53675 1640 aa12.54□□□□□ -0.4
SMARCA2-260ENST00000637352 SPHKAPQ2M3C7 1700 aa12.54□□□□□ -0.4
SMARCA2-260ENST00000637352 PTCH1Q13635 1447 aa12.53□□□□□ -0.4
SMARCA2-260ENST00000637352 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms