RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 KDM5AP29375 1690 aaKnown RBP21.75■■□□□ 1.07
CLN6-219ENST00000637329 GPRASP1Q5JY77 1395 aa21.74■■□□□ 1.07
CLN6-219ENST00000637329 CFAP65Q6ZU64 1925 aaKnown RBP21.74■■□□□ 1.07
CLN6-219ENST00000637329 RPGRIP1LQ68CZ1 1315 aa21.74■■□□□ 1.07
CLN6-219ENST00000637329 NEXMIFQ5QGS0 1516 aa21.72■■□□□ 1.07
CLN6-219ENST00000637329 EIF4G2P78344 907 aaKnown RBP eCLIP21.71■■□□□ 1.074e-7■■□□□ 14.2
CLN6-219ENST00000637329 ZNF326Q5BKZ1 582 aaKnown RBP21.71■■□□□ 1.07
CLN6-219ENST00000637329 C3P01024 1663 aa21.71■■□□□ 1.07
CLN6-219ENST00000637329 KDM2AQ9Y2K7 1162 aa21.7■■□□□ 1.06
CLN6-219ENST00000637329 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
CLN6-219ENST00000637329 ZFYVE9O95405 1425 aa21.68■■□□□ 1.06
CLN6-219ENST00000637329 TNRQ92752 1358 aa21.67■■□□□ 1.06
CLN6-219ENST00000637329 USP47Q96K76 1375 aa21.67■■□□□ 1.06
CLN6-219ENST00000637329 FBXO31Q5XUX0 539 aaPredicted RBP21.67■■□□□ 1.06
CLN6-219ENST00000637329 POLR1AO95602 1720 aaPredicted RBP21.66■■□□□ 1.06
CLN6-219ENST00000637329 NLRP1Q9C000 1473 aa21.66■■□□□ 1.06
CLN6-219ENST00000637329 IDI1Q13907 227 aa21.66■■□□□ 1.06
CLN6-219ENST00000637329 PIK3C2GO75747 1445 aa21.65■■□□□ 1.06
CLN6-219ENST00000637329 MYO5BQ9ULV0 1848 aa21.65■■□□□ 1.06
CLN6-219ENST00000637329 SETBP1Q9Y6X0 1596 aa21.65■■□□□ 1.06
CLN6-219ENST00000637329 IQGAP1P46940 1657 aa21.64■■□□□ 1.05
CLN6-219ENST00000637329 HSPA5P11021 654 aaKnown RBP21.64■■□□□ 1.05
CLN6-219ENST00000637329 A2ML1A8K2U0 1454 aa21.64■■□□□ 1.05
CLN6-219ENST00000637329 CARD11Q9BXL7 1154 aa21.63■■□□□ 1.05
CLN6-219ENST00000637329 CHGAP10645 457 aaKnown RBP21.62■■□□□ 1.05
CLN6-219ENST00000637329 DIEXFQ68CQ4 756 aaKnown RBP21.6■■□□□ 1.05
CLN6-219ENST00000637329 UBR1Q8IWV7 1749 aa21.6■■□□□ 1.05
CLN6-219ENST00000637329 MYO3AQ8NEV4 1616 aa21.58■■□□□ 1.04
CLN6-219ENST00000637329 SCAF11Q99590 1463 aaKnown RBP21.58■■□□□ 1.04
CLN6-219ENST00000637329 VGFO15240 615 aaPredicted RBP21.57■■□□□ 1.04
CLN6-219ENST00000637329 ADGRF5Q8IZF2 1346 aa21.56■■□□□ 1.04
CLN6-219ENST00000637329 CEBPAP49715 358 aaPredicted RBP21.56■■□□□ 1.04
CLN6-219ENST00000637329 SETD1BQ9UPS6 1966 aaKnown RBP21.54■■□□□ 1.04
CLN6-219ENST00000637329 ADGRB1O14514 1584 aa21.53■■□□□ 1.04
CLN6-219ENST00000637329 EIF3AQ14152 1382 aaKnown RBP21.53■■□□□ 1.04
CLN6-219ENST00000637329 STAG3Q9UJ98 1225 aa21.53■■□□□ 1.04
CLN6-219ENST00000637329 ZNF142P52746 1687 aaPredicted RBP21.53■■□□□ 1.04
CLN6-219ENST00000637329 IQSEC2Q5JU85 1478 aa21.52■■□□□ 1.04
CLN6-219ENST00000637329 NBPF1Q3BBV0 1214 aa21.52■■□□□ 1.04
CLN6-219ENST00000637329 RIMS2Q9UQ26 1411 aa21.52■■□□□ 1.04
CLN6-219ENST00000637329 STRCQ7RTU9 1775 aa21.51■■□□□ 1.03
CLN6-219ENST00000637329 HIRIP3Q9BW71 556 aaPredicted RBP21.5■■□□□ 1.03
CLN6-219ENST00000637329 CCDC7Q96M83 1385 aa21.48■■□□□ 1.03
CLN6-219ENST00000637329 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.48■■□□□ 1.03
CLN6-219ENST00000637329 C14orf93Q9H972 538 aaKnown RBP21.48■■□□□ 1.03
CLN6-219ENST00000637329 SLIT1O75093 1534 aa21.48■■□□□ 1.03
CLN6-219ENST00000637329 CEP170BQ9Y4F5 1589 aaPredicted RBP21.48■■□□□ 1.03
CLN6-219ENST00000637329 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
CLN6-219ENST00000637329 TMEM2Q9UHN6 1383 aa21.46■■□□□ 1.03
CLN6-219ENST00000637329 ARHGAP23Q9P227 1491 aa21.45■■□□□ 1.03
CLN6-219ENST00000637329 ASXL1Q8IXJ9 1541 aa21.45■■□□□ 1.02
CLN6-219ENST00000637329 CFAP70Q5T0N1 1121 aa21.45■■□□□ 1.02
CLN6-219ENST00000637329 SETD1AO15047 1707 aaKnown RBP21.44■■□□□ 1.02
CLN6-219ENST00000637329 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
CLN6-219ENST00000637329 UBAP1LF5GYI3 381 aa21.44■■□□□ 1.02
CLN6-219ENST00000637329 ALKQ9UM73 1620 aa21.44■■□□□ 1.02
CLN6-219ENST00000637329 HDGFP51858 240 aaKnown RBP21.43■■□□□ 1.02
CLN6-219ENST00000637329 NRXN3Q9Y4C0 1643 aa21.43■■□□□ 1.02
CLN6-219ENST00000637329 KIF7Q2M1P5 1343 aa21.42■■□□□ 1.02
CLN6-219ENST00000637329 SBNO2Q9Y2G9 1366 aa21.42■■□□□ 1.02
CLN6-219ENST00000637329 ARHGEF28Q8N1W1 1705 aaKnown RBP21.41■■□□□ 1.02
CLN6-219ENST00000637329 SLC24A1O60721 1099 aa21.4■■□□□ 1.02
CLN6-219ENST00000637329 LTBP4Q8N2S1 1624 aa21.39■■□□□ 1.01
CLN6-219ENST00000637329 TESK2Q96S53 571 aa21.38■■□□□ 1.01
CLN6-219ENST00000637329 PLEKHG1Q9ULL1 1385 aa21.37■■□□□ 1.01
CLN6-219ENST00000637329 DIP2AQ14689 1571 aa21.37■■□□□ 1.01
CLN6-219ENST00000637329 QRICH2Q9H0J4 1663 aa21.37■■□□□ 1.01
CLN6-219ENST00000637329 C11orf95C9JLR9 678 aaPredicted RBP21.36■■□□□ 1.01
CLN6-219ENST00000637329 DDX10Q13206 875 aaKnown RBP21.36■■□□□ 1.01
CLN6-219ENST00000637329 DLC1Q96QB1 1528 aa21.35■■□□□ 1.01
CLN6-219ENST00000637329 NUTM2DQ5VT03 806 aaPredicted RBP21.35■■□□□ 1.01
CLN6-219ENST00000637329 KNDC1Q76NI1 1749 aa21.35■■□□□ 1.01
CLN6-219ENST00000637329 THEMISQ8N1K5 641 aaPredicted RBP21.34■■□□□ 1.01
CLN6-219ENST00000637329 YTHDC2Q9H6S0 1430 aaKnown RBP21.33■■□□□ 1.01
CLN6-219ENST00000637329 TMF1P82094 1093 aa21.33■■□□□ 1.01
CLN6-219ENST00000637329 CENPJQ9HC77 1338 aaPredicted RBP21.3■■□□□ 1
CLN6-219ENST00000637329 CDCA8Q53HL2 280 aa21.3■■□□□ 1
CLN6-219ENST00000637329 EID1Q9Y6B2 187 aa21.3■■□□□ 1
CLN6-219ENST00000637329 MED14O60244 1454 aa21.29■■□□□ 1
CLN6-219ENST00000637329 LRPPRCP42704 1394 aaKnown RBP21.29■■□□□ 1
CLN6-219ENST00000637329 CPS1P31327 1500 aa21.29■■□□□ 1
CLN6-219ENST00000637329 TECPR2O15040 1411 aa21.29■■□□□ 1
CLN6-219ENST00000637329 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
CLN6-219ENST00000637329 SCAF1Q9H7N4 1312 aaKnown RBP21.28■■□□□ 1
CLN6-219ENST00000637329 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
CLN6-219ENST00000637329 TMEM132EQ6IEE7 984 aa21.26■□□□□ 0.99
CLN6-219ENST00000637329 MYOM1P52179 1685 aa21.25■□□□□ 0.99
CLN6-219ENST00000637329 TRAK1Q9UPV9 953 aa21.25■□□□□ 0.99
CLN6-219ENST00000637329 ABCC11Q96J66 1382 aa21.24■□□□□ 0.99
CLN6-219ENST00000637329 LTKP29376 864 aa21.23■□□□□ 0.99
CLN6-219ENST00000637329 TXNDC2Q86VQ3 553 aa21.23■□□□□ 0.99
CLN6-219ENST00000637329 ZNF335Q9H4Z2 1342 aaPredicted RBP21.23■□□□□ 0.99
CLN6-219ENST00000637329 TOM1O60784 492 aa21.22■□□□□ 0.99
CLN6-219ENST00000637329 MIER1Q8N108 512 aa21.22■□□□□ 0.99
CLN6-219ENST00000637329 FAM135BQ49AJ0 1406 aa21.21■□□□□ 0.99
CLN6-219ENST00000637329 TULP4Q9NRJ4 1543 aa21.21■□□□□ 0.99
CLN6-219ENST00000637329 NCKAP5LQ9HCH0 1330 aa21.21■□□□□ 0.99
CLN6-219ENST00000637329 METP08581 1390 aa21.21■□□□□ 0.99
CLN6-219ENST00000637329 ANP32CO43423 234 aa21.19■□□□□ 0.98
CLN6-219ENST00000637329 HSPA1LP34931 641 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms