RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ZMYM4Q5VZL5 1548 aa16.29■□□□□ 0.2
CLN8-212ENST00000637083 NEO1Q92859 1461 aa16.29■□□□□ 0.2
CLN8-212ENST00000637083 HECW2Q9P2P5 1572 aa16.28■□□□□ 0.2
CLN8-212ENST00000637083 MAP3K4Q9Y6R4 1608 aa16.28■□□□□ 0.2
CLN8-212ENST00000637083 IRX6P78412 446 aaPredicted RBP16.28■□□□□ 0.2
CLN8-212ENST00000637083 PDE3BQ13370 1112 aa16.27■□□□□ 0.2
CLN8-212ENST00000637083 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
CLN8-212ENST00000637083 SYNMO15061 1565 aa16.26■□□□□ 0.19
CLN8-212ENST00000637083 RAPGEF3O95398 923 aa16.26■□□□□ 0.19
CLN8-212ENST00000637083 KNSTRNQ9Y448 316 aa16.26■□□□□ 0.19
CLN8-212ENST00000637083 PPRC1Q5VV67 1664 aaKnown RBP16.26■□□□□ 0.19
CLN8-212ENST00000637083 MYT1Q01538 1121 aa16.25■□□□□ 0.19
CLN8-212ENST00000637083 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
CLN8-212ENST00000637083 GGT6Q6P531 493 aa16.24■□□□□ 0.19
CLN8-212ENST00000637083 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
CLN8-212ENST00000637083 IFT172Q9UG01 1749 aa16.22■□□□□ 0.19
CLN8-212ENST00000637083 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.19
CLN8-212ENST00000637083 RPGRIP1LQ68CZ1 1315 aa16.21■□□□□ 0.19
CLN8-212ENST00000637083 FRMPD1Q5SYB0 1578 aa16.21■□□□□ 0.19
CLN8-212ENST00000637083 ADGRB3O60242 1522 aa16.21■□□□□ 0.19
CLN8-212ENST00000637083 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.19
CLN8-212ENST00000637083 ABCA6Q8N139 1617 aa16.2■□□□□ 0.18
CLN8-212ENST00000637083 KDM5AP29375 1690 aaKnown RBP16.19■□□□□ 0.18
CLN8-212ENST00000637083 UGGT1Q9NYU2 1555 aa16.19■□□□□ 0.18
CLN8-212ENST00000637083 SETBP1Q9Y6X0 1596 aa16.19■□□□□ 0.18
CLN8-212ENST00000637083 NPATQ14207 1427 aa16.19■□□□□ 0.18
CLN8-212ENST00000637083 ADGRF5Q8IZF2 1346 aa16.18■□□□□ 0.18
CLN8-212ENST00000637083 CFAP70Q5T0N1 1121 aa16.18■□□□□ 0.18
CLN8-212ENST00000637083 SBNO2Q9Y2G9 1366 aa16.18■□□□□ 0.18
CLN8-212ENST00000637083 ASXL1Q8IXJ9 1541 aa16.18■□□□□ 0.18
CLN8-212ENST00000637083 BLMP54132 1417 aaPredicted RBP16.17■□□□□ 0.18
CLN8-212ENST00000637083 ABCC3O15438 1527 aa16.17■□□□□ 0.18
CLN8-212ENST00000637083 MROH2AA6NES4 1674 aa16.17■□□□□ 0.18
CLN8-212ENST00000637083 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
CLN8-212ENST00000637083 MYO3AQ8NEV4 1616 aa16.15■□□□□ 0.18
CLN8-212ENST00000637083 NOS1P29475 1434 aa16.15■□□□□ 0.18
CLN8-212ENST00000637083 CHGAP10645 457 aaKnown RBP16.15■□□□□ 0.18
CLN8-212ENST00000637083 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
CLN8-212ENST00000637083 CAMSAP1Q5T5Y3 1602 aa16.14■□□□□ 0.17
CLN8-212ENST00000637083 ZC3H13Q5T200 1668 aaKnown RBP16.13■□□□□ 0.17
CLN8-212ENST00000637083 GLI2P10070 1586 aa16.13■□□□□ 0.17
CLN8-212ENST00000637083 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
CLN8-212ENST00000637083 PIK3C2GO75747 1445 aa16.13■□□□□ 0.17
CLN8-212ENST00000637083 ARHGAP31Q2M1Z3 1444 aa16.13■□□□□ 0.17
CLN8-212ENST00000637083 MYOM1P52179 1685 aa16.13■□□□□ 0.17
CLN8-212ENST00000637083 DIP2CQ9Y2E4 1556 aa16.13■□□□□ 0.17
CLN8-212ENST00000637083 ERVK-7P63135 1459 aa16.13■□□□□ 0.17
CLN8-212ENST00000637083 FAM69CQ0P6D2 419 aa16.12■□□□□ 0.17
CLN8-212ENST00000637083 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLN8-212ENST00000637083 PPLO60437 1756 aa16.12■□□□□ 0.17
CLN8-212ENST00000637083 C14orf93Q9H972 538 aaKnown RBP16.12■□□□□ 0.17
CLN8-212ENST00000637083 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
CLN8-212ENST00000637083 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
CLN8-212ENST00000637083 RCAN3Q9UKA8 241 aa16.11■□□□□ 0.17
CLN8-212ENST00000637083 VGFO15240 615 aaPredicted RBP16.1■□□□□ 0.17
CLN8-212ENST00000637083 RICTORQ6R327 1708 aa16.1■□□□□ 0.17
CLN8-212ENST00000637083 CCDC136Q96JN2 1154 aa16.09■□□□□ 0.17
CLN8-212ENST00000637083 RRP1P56182 461 aaKnown RBP16.09■□□□□ 0.17
CLN8-212ENST00000637083 YEATS2Q9ULM3 1422 aa16.08■□□□□ 0.16
CLN8-212ENST00000637083 PIK3C2BO00750 1634 aa16.08■□□□□ 0.16
CLN8-212ENST00000637083 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
CLN8-212ENST00000637083 SLC52A1Q9NWF4 448 aa16.07■□□□□ 0.16
CLN8-212ENST00000637083 PUS7Q96PZ0 661 aaKnown RBP16.07■□□□□ 0.16
CLN8-212ENST00000637083 ADAMTS8Q9UP79 889 aa16.06■□□□□ 0.16
CLN8-212ENST00000637083 SALL2Q9Y467 1007 aaPredicted RBP16.06■□□□□ 0.16
CLN8-212ENST00000637083 ADGRB1O14514 1584 aa16.05■□□□□ 0.16
CLN8-212ENST00000637083 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
CLN8-212ENST00000637083 ZFYVE9O95405 1425 aa16.03■□□□□ 0.16
CLN8-212ENST00000637083 IDI1Q13907 227 aa16.03■□□□□ 0.16
CLN8-212ENST00000637083 TRAK1Q9UPV9 953 aa16.03■□□□□ 0.16
CLN8-212ENST00000637083 FANCIQ9NVI1 1328 aa16.03■□□□□ 0.16
CLN8-212ENST00000637083 SIGLEC1Q9BZZ2 1709 aa16.02■□□□□ 0.15
CLN8-212ENST00000637083 CFAP65Q6ZU64 1925 aaKnown RBP16.02■□□□□ 0.15
CLN8-212ENST00000637083 QRICH2Q9H0J4 1663 aa16.02■□□□□ 0.15
CLN8-212ENST00000637083 NEXMIFQ5QGS0 1516 aa16.01■□□□□ 0.15
CLN8-212ENST00000637083 TMEM132EQ6IEE7 984 aa16.01■□□□□ 0.15
CLN8-212ENST00000637083 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
CLN8-212ENST00000637083 NUTM2DQ5VT03 806 aaPredicted RBP16■□□□□ 0.15
CLN8-212ENST00000637083 CDCA7LQ96GN5 454 aa16■□□□□ 0.15
CLN8-212ENST00000637083 EVC2Q86UK5 1308 aa16■□□□□ 0.15
CLN8-212ENST00000637083 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
CLN8-212ENST00000637083 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
CLN8-212ENST00000637083 POLR3AO14802 1390 aaPredicted RBP15.97■□□□□ 0.15
CLN8-212ENST00000637083 REREQ9P2R6 1566 aa15.97■□□□□ 0.15
CLN8-212ENST00000637083 PREX1Q8TCU6 1659 aa15.96■□□□□ 0.15
CLN8-212ENST00000637083 USP32Q8NFA0 1604 aa15.96■□□□□ 0.15
CLN8-212ENST00000637083 DIP2BQ9P265 1576 aa15.96■□□□□ 0.15
CLN8-212ENST00000637083 FBXO31Q5XUX0 539 aaPredicted RBP15.95■□□□□ 0.14
CLN8-212ENST00000637083 MORC1Q86VD1 984 aa15.95■□□□□ 0.14
CLN8-212ENST00000637083 NSD3Q9BZ95 1437 aa15.95■□□□□ 0.14
CLN8-212ENST00000637083 ZNF521Q96K83 1311 aa15.95■□□□□ 0.14
CLN8-212ENST00000637083 NSD2O96028 1365 aa15.95■□□□□ 0.14
CLN8-212ENST00000637083 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
CLN8-212ENST00000637083 ANP32EQ9BTT0 268 aa15.95■□□□□ 0.14
CLN8-212ENST00000637083 CGNL1Q0VF96 1302 aa15.95■□□□□ 0.14
CLN8-212ENST00000637083 NINLQ9Y2I6 1382 aa15.94■□□□□ 0.14
CLN8-212ENST00000637083 AGLP35573 1532 aa15.94■□□□□ 0.14
CLN8-212ENST00000637083 EXOC6Q8TAG9 804 aa15.94■□□□□ 0.14
CLN8-212ENST00000637083 ARHGEF28Q8N1W1 1705 aaKnown RBP15.93■□□□□ 0.14
CLN8-212ENST00000637083 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms