RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 IDI1Q13907 227 aa21.98■■□□□ 1.11
CACNA1A-231ENST00000636816 PREX1Q8TCU6 1659 aa21.98■■□□□ 1.11
CACNA1A-231ENST00000636816 IQGAP1P46940 1657 aa21.97■■□□□ 1.11
CACNA1A-231ENST00000636816 PPLO60437 1756 aa21.96■■□□□ 1.11
CACNA1A-231ENST00000636816 CLTCQ00610 1675 aaKnown RBP21.96■■□□□ 1.11
CACNA1A-231ENST00000636816 KIAA1210Q9ULL0 1709 aa21.95■■□□□ 1.11
CACNA1A-231ENST00000636816 NRXN1Q9ULB1 1477 aa21.94■■□□□ 1.1
CACNA1A-231ENST00000636816 PRKRIP1Q9H875 184 aaPredicted RBP21.94■■□□□ 1.1
CACNA1A-231ENST00000636816 DISP3Q9P2K9 1392 aa21.93■■□□□ 1.1
CACNA1A-231ENST00000636816 NUTM2DQ5VT03 806 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-231ENST00000636816 TRHP20396 242 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-231ENST00000636816 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
CACNA1A-231ENST00000636816 SCAF11Q99590 1463 aaKnown RBP21.91■■□□□ 1.1
CACNA1A-231ENST00000636816 MYO5BQ9ULV0 1848 aa21.91■■□□□ 1.1
CACNA1A-231ENST00000636816 CNGB1Q14028 1251 aaPredicted RBP21.9■■□□□ 1.1
CACNA1A-231ENST00000636816 SLC52A1Q9NWF4 448 aa21.9■■□□□ 1.1
CACNA1A-231ENST00000636816 RPGRIP1LQ68CZ1 1315 aa21.9■■□□□ 1.1
CACNA1A-231ENST00000636816 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-231ENST00000636816 CCDC184Q52MB2 194 aa21.9■■□□□ 1.1
CACNA1A-231ENST00000636816 ERVK-7P63135 1459 aa21.89■■□□□ 1.09
CACNA1A-231ENST00000636816 PIK3C2GO75747 1445 aa21.87■■□□□ 1.09
CACNA1A-231ENST00000636816 TMF1P82094 1093 aa21.87■■□□□ 1.09
CACNA1A-231ENST00000636816 NEXMIFQ5QGS0 1516 aa21.86■■□□□ 1.09
CACNA1A-231ENST00000636816 TMEM131LA2VDJ0 1609 aa21.86■■□□□ 1.09
CACNA1A-231ENST00000636816 C14orf93Q9H972 538 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-231ENST00000636816 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.09
CACNA1A-231ENST00000636816 TMEM132EQ6IEE7 984 aa21.83■■□□□ 1.08
CACNA1A-231ENST00000636816 VGFO15240 615 aaPredicted RBP21.82■■□□□ 1.08
CACNA1A-231ENST00000636816 ZMYM3Q14202 1370 aa21.8■■□□□ 1.08
CACNA1A-231ENST00000636816 SETBP1Q9Y6X0 1596 aa21.8■■□□□ 1.08
CACNA1A-231ENST00000636816 ESF1Q9H501 851 aaKnown RBP21.79■■□□□ 1.08
CACNA1A-231ENST00000636816 SPATA31D1Q6ZQQ2 1576 aa21.79■■□□□ 1.08
CACNA1A-231ENST00000636816 EIF3AQ14152 1382 aaKnown RBP21.79■■□□□ 1.08
CACNA1A-231ENST00000636816 ADGRB1O14514 1584 aa21.78■■□□□ 1.08
CACNA1A-231ENST00000636816 GTF3C3Q9Y5Q9 886 aa21.78■■□□□ 1.08
CACNA1A-231ENST00000636816 TRAK1Q9UPV9 953 aa21.78■■□□□ 1.08
CACNA1A-231ENST00000636816 STAG3Q9UJ98 1225 aa21.77■■□□□ 1.08
CACNA1A-231ENST00000636816 PER1O15534 1290 aaPredicted RBP21.76■■□□□ 1.07
CACNA1A-231ENST00000636816 PANK3Q9H999 370 aa21.76■■□□□ 1.07
CACNA1A-231ENST00000636816 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
CACNA1A-231ENST00000636816 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
CACNA1A-231ENST00000636816 ZFYVE9O95405 1425 aa21.75■■□□□ 1.07
CACNA1A-231ENST00000636816 MYO3AQ8NEV4 1616 aa21.71■■□□□ 1.07
CACNA1A-231ENST00000636816 A2ML1A8K2U0 1454 aa21.71■■□□□ 1.07
CACNA1A-231ENST00000636816 CENPJQ9HC77 1338 aaPredicted RBP21.7■■□□□ 1.06
CACNA1A-231ENST00000636816 FAM9BQ8IZU0 186 aa21.7■■□□□ 1.06
CACNA1A-231ENST00000636816 CDCA8Q53HL2 280 aa21.69■■□□□ 1.06
CACNA1A-231ENST00000636816 ASXL1Q8IXJ9 1541 aa21.67■■□□□ 1.06
CACNA1A-231ENST00000636816 MYOM1P52179 1685 aa21.67■■□□□ 1.06
CACNA1A-231ENST00000636816 CEBPAP49715 358 aaPredicted RBP21.67■■□□□ 1.06
CACNA1A-231ENST00000636816 KDM5AP29375 1690 aaKnown RBP21.66■■□□□ 1.06
CACNA1A-231ENST00000636816 QRICH2Q9H0J4 1663 aa21.66■■□□□ 1.06
CACNA1A-231ENST00000636816 CC2D1BQ5T0F9 858 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-231ENST00000636816 STK26Q9P289 416 aa21.65■■□□□ 1.06
CACNA1A-231ENST00000636816 TNRQ92752 1358 aa21.65■■□□□ 1.06
CACNA1A-231ENST00000636816 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
CACNA1A-231ENST00000636816 RALBP1Q15311 655 aa21.65■■□□□ 1.06
CACNA1A-231ENST00000636816 RIMS2Q9UQ26 1411 aa21.64■■□□□ 1.06
CACNA1A-231ENST00000636816 SBNO2Q9Y2G9 1366 aa21.64■■□□□ 1.05
CACNA1A-231ENST00000636816 ARHGEF28Q8N1W1 1705 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-231ENST00000636816 KTN1Q86UP2 1357 aaKnown RBP21.63■■□□□ 1.05
CACNA1A-231ENST00000636816 ALKQ9UM73 1620 aa21.62■■□□□ 1.05
CACNA1A-231ENST00000636816 SLC24A1O60721 1099 aa21.62■■□□□ 1.05
CACNA1A-231ENST00000636816 MYBBP1AQ9BQG0 1328 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-231ENST00000636816 PARD3Q8TEW0 1356 aa21.62■■□□□ 1.05
CACNA1A-231ENST00000636816 PLPPR3Q6T4P5 718 aa21.61■■□□□ 1.05
CACNA1A-231ENST00000636816 SAFB2Q14151 953 aaKnown RBP eCLIP21.59■■□□□ 1.05
CACNA1A-231ENST00000636816 TMC1Q8TDI8 760 aa21.58■■□□□ 1.05
CACNA1A-231ENST00000636816 KNSTRNQ9Y448 316 aa21.57■■□□□ 1.04
CACNA1A-231ENST00000636816 C3P01024 1663 aa21.57■■□□□ 1.04
CACNA1A-231ENST00000636816 FER1L4A9Z1Z3 1794 aa21.57■■□□□ 1.04
CACNA1A-231ENST00000636816 PTPRMP28827 1452 aa21.56■■□□□ 1.04
CACNA1A-231ENST00000636816 YTHDC2Q9H6S0 1430 aaKnown RBP21.56■■□□□ 1.04
CACNA1A-231ENST00000636816 PNISRQ8TF01 805 aaKnown RBP21.56■■□□□ 1.04
CACNA1A-231ENST00000636816 UBR1Q8IWV7 1749 aa21.56■■□□□ 1.04
CACNA1A-231ENST00000636816 AMER1Q5JTC6 1135 aaPredicted RBP21.55■■□□□ 1.04
CACNA1A-231ENST00000636816 BRD4O60885 1362 aaPredicted RBP21.54■■□□□ 1.04
CACNA1A-231ENST00000636816 CARD14Q9BXL6 1004 aa21.54■■□□□ 1.04
CACNA1A-231ENST00000636816 TULP4Q9NRJ4 1543 aa21.53■■□□□ 1.04
CACNA1A-231ENST00000636816 SETD1AO15047 1707 aaKnown RBP21.53■■□□□ 1.04
CACNA1A-231ENST00000636816 NRXN3Q9Y4C0 1643 aa21.53■■□□□ 1.04
CACNA1A-231ENST00000636816 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.52■■□□□ 1.04
CACNA1A-231ENST00000636816 PRAM1Q96QH2 718 aa21.52■■□□□ 1.04
CACNA1A-231ENST00000636816 SLC12A5Q9H2X9 1139 aa21.52■■□□□ 1.04
CACNA1A-231ENST00000636816 NLRP13Q86W25 1043 aa21.52■■□□□ 1.04
CACNA1A-231ENST00000636816 EVC2Q86UK5 1308 aa21.5■■□□□ 1.03
CACNA1A-231ENST00000636816 CABP2Q9NPB3 220 aa21.5■■□□□ 1.03
CACNA1A-231ENST00000636816 TMEM2Q9UHN6 1383 aa21.5■■□□□ 1.03
CACNA1A-231ENST00000636816 POGKQ9P215 609 aa21.49■■□□□ 1.03
CACNA1A-231ENST00000636816 MINK1Q8N4C8 1332 aaPredicted RBP21.49■■□□□ 1.03
CACNA1A-231ENST00000636816 NLRP1Q9C000 1473 aa21.47■■□□□ 1.03
CACNA1A-231ENST00000636816 METP08581 1390 aa21.47■■□□□ 1.03
CACNA1A-231ENST00000636816 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
CACNA1A-231ENST00000636816 HDGFP51858 240 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-231ENST00000636816 LTKP29376 864 aa21.46■■□□□ 1.03
CACNA1A-231ENST00000636816 WAPLQ7Z5K2 1190 aa21.46■■□□□ 1.03
CACNA1A-231ENST00000636816 BCANQ96GW7 911 aa21.46■■□□□ 1.03
CACNA1A-231ENST00000636816 LRPPRCP42704 1394 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-231ENST00000636816 PPP2R1AP30153 589 aa21.44■■□□□ 1.02
CACNA1A-231ENST00000636816 PLEKHH1Q9ULM0 1364 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms