RNA–Protein interactions for RNA: ENST00000636666.1

EPB41-213, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5

Gene EPB41, Length 3,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-213ENST00000636666 URB2Q14146 1524 aaKnown RBP8.45□□□□□ -1.06
EPB41-213ENST00000636666 PARD3Q8TEW0 1356 aa8.45□□□□□ -1.06
EPB41-213ENST00000636666 TESK2Q96S53 571 aa8.45□□□□□ -1.06
EPB41-213ENST00000636666 TMEM132EQ6IEE7 984 aa8.45□□□□□ -1.06
EPB41-213ENST00000636666 SLC12A5Q9H2X9 1139 aa8.45□□□□□ -1.06
EPB41-213ENST00000636666 TROQ12816 1431 aaPredicted RBP8.45□□□□□ -1.06
EPB41-213ENST00000636666 CARMIL2Q6F5E8 1435 aa8.45□□□□□ -1.06
EPB41-213ENST00000636666 MTHFSP49914 203 aa8.44□□□□□ -1.06
EPB41-213ENST00000636666 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
EPB41-213ENST00000636666 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
EPB41-213ENST00000636666 WWC1Q8IX03 1113 aa8.44□□□□□ -1.06
EPB41-213ENST00000636666 PCDHB15Q9Y5E8 787 aa8.44□□□□□ -1.06
EPB41-213ENST00000636666 KDM2BQ8NHM5 1336 aa8.44□□□□□ -1.06
EPB41-213ENST00000636666 MCM4P33991 863 aa8.44□□□□□ -1.06
EPB41-213ENST00000636666 GGT6Q6P531 493 aa8.44□□□□□ -1.06
EPB41-213ENST00000636666 CHMP5Q9NZZ3 219 aa8.44□□□□□ -1.06
EPB41-213ENST00000636666 CC2D2AQ9P2K1 1620 aa8.44□□□□□ -1.06
EPB41-213ENST00000636666 SRPK2P78362 688 aaKnown RBP8.44□□□□□ -1.06
EPB41-213ENST00000636666 ANKRD45Q5TZF3 282 aa8.44□□□□□ -1.06
EPB41-213ENST00000636666 XRCC6P12956 609 aaKnown RBP eCLIP8.43□□□□□ -1.06
EPB41-213ENST00000636666 ZKSCAN2Q63HK3 967 aa8.43□□□□□ -1.06
EPB41-213ENST00000636666 DZIP1LQ8IYY4 767 aaKnown RBP8.43□□□□□ -1.06
EPB41-213ENST00000636666 MSNP26038 577 aaKnown RBP8.43□□□□□ -1.06
EPB41-213ENST00000636666 PLCB2Q00722 1185 aa8.43□□□□□ -1.06
EPB41-213ENST00000636666 TCOF1Q13428 1488 aaKnown RBP8.43□□□□□ -1.06
EPB41-213ENST00000636666 NOL8Q76FK4 1167 aaKnown RBP8.43□□□□□ -1.06
EPB41-213ENST00000636666 ARHGEF11O15085 1522 aa8.43□□□□□ -1.06
EPB41-213ENST00000636666 RLBP1P12271 317 aa8.43□□□□□ -1.06
EPB41-213ENST00000636666 DNTTIP2Q5QJE6 756 aaKnown RBP8.43□□□□□ -1.06
EPB41-213ENST00000636666 AFAP1Q8N556 730 aa8.43□□□□□ -1.06
EPB41-213ENST00000636666 UBE2Q2Q8WVN8 375 aa8.43□□□□□ -1.06
EPB41-213ENST00000636666 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
EPB41-213ENST00000636666 CUL7Q14999 1698 aa8.43□□□□□ -1.06
EPB41-213ENST00000636666 PTMAP06454 111 aaKnown RBP8.42□□□□□ -1.06
EPB41-213ENST00000636666 PDE3AQ14432 1141 aa8.42□□□□□ -1.06
EPB41-213ENST00000636666 GBP4Q96PP9 640 aa8.42□□□□□ -1.06
EPB41-213ENST00000636666 DDX49Q9Y6V7 483 aaKnown RBP8.42□□□□□ -1.06
EPB41-213ENST00000636666 AMER1Q5JTC6 1135 aaPredicted RBP8.42□□□□□ -1.06
EPB41-213ENST00000636666 IQGAP2Q13576 1575 aa8.41□□□□□ -1.06
EPB41-213ENST00000636666 EXOSC9Q06265 439 aaKnown RBP8.41□□□□□ -1.06
EPB41-213ENST00000636666 BCORL1Q5H9F3 1711 aa8.41□□□□□ -1.06
EPB41-213ENST00000636666 CTTNBP2Q8WZ74 1663 aa8.41□□□□□ -1.06
EPB41-213ENST00000636666 RALGAPBQ86X10 1494 aa8.41□□□□□ -1.06
EPB41-213ENST00000636666 SOX12O15370 315 aa8.41□□□□□ -1.06
EPB41-213ENST00000636666 RARSP54136 660 aaKnown RBP8.41□□□□□ -1.06
EPB41-213ENST00000636666 RBM10P98175 930 aaKnown RBP8.41□□□□□ -1.06
EPB41-213ENST00000636666 RUNDC1Q96C34 613 aa8.41□□□□□ -1.06
EPB41-213ENST00000636666 GPATCH8Q9UKJ3 1502 aaKnown RBP8.4□□□□□ -1.06
EPB41-213ENST00000636666 MPNDQ8N594 471 aa8.4□□□□□ -1.06
EPB41-213ENST00000636666 GGNBP2Q9H3C7 697 aa8.4□□□□□ -1.06
EPB41-213ENST00000636666 STAG3Q9UJ98 1225 aa8.4□□□□□ -1.06
EPB41-213ENST00000636666 PKNOX2Q96KN3 472 aa8.4□□□□□ -1.07
EPB41-213ENST00000636666 GRPEL1Q9HAV7 217 aa8.4□□□□□ -1.07
EPB41-213ENST00000636666 FAM13BQ9NYF5 915 aa8.4□□□□□ -1.07
EPB41-213ENST00000636666 SPAG9O60271 1321 aaKnown RBP8.39□□□□□ -1.07
EPB41-213ENST00000636666 DDX11L8A8MPP1 907 aa8.39□□□□□ -1.07
EPB41-213ENST00000636666 MRE11P49959 708 aa8.39□□□□□ -1.07
EPB41-213ENST00000636666 EFCAB2Q5VUJ9 269 aa8.39□□□□□ -1.07
EPB41-213ENST00000636666 NUP153P49790 1475 aaKnown RBP8.39□□□□□ -1.07
EPB41-213ENST00000636666 KIAA0586Q9BVV6 1533 aa8.39□□□□□ -1.07
EPB41-213ENST00000636666 ERCC6Q03468 1493 aa8.39□□□□□ -1.07
EPB41-213ENST00000636666 ESPNB1AK53 854 aa8.39□□□□□ -1.07
EPB41-213ENST00000636666 NKTRP30414 1462 aaKnown RBP8.38□□□□□ -1.07
EPB41-213ENST00000636666 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.38□□□□□ -1.07
EPB41-213ENST00000636666 TBC1D32Q96NH3 1257 aa8.38□□□□□ -1.07
EPB41-213ENST00000636666 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
EPB41-213ENST00000636666 NOB1Q9ULX3 412 aaKnown RBP8.38□□□□□ -1.07
EPB41-213ENST00000636666 ZNF608Q9ULD9 1512 aaPredicted RBP8.38□□□□□ -1.07
EPB41-213ENST00000636666 PLEKHG5O94827 1062 aa8.37□□□□□ -1.07
EPB41-213ENST00000636666 RIPK4P57078 832 aa8.37□□□□□ -1.07
EPB41-213ENST00000636666 CALD1Q05682 793 aaKnown RBP8.37□□□□□ -1.07
EPB41-213ENST00000636666 CABP2Q9NPB3 220 aa8.37□□□□□ -1.07
EPB41-213ENST00000636666 PTPRGP23470 1445 aa8.37□□□□□ -1.07
EPB41-213ENST00000636666 MCTP1Q6DN14 999 aa8.37□□□□□ -1.07
EPB41-213ENST00000636666 EIF3AQ14152 1382 aaKnown RBP8.37□□□□□ -1.07
EPB41-213ENST00000636666 PRAG1Q86YV5 1406 aa8.37□□□□□ -1.07
EPB41-213ENST00000636666 IPO8O15397 1037 aaKnown RBP8.37□□□□□ -1.07
EPB41-213ENST00000636666 MVPQ14764 893 aaKnown RBP8.37□□□□□ -1.07
EPB41-213ENST00000636666 RNF214Q8ND24 703 aa8.36□□□□□ -1.07
EPB41-213ENST00000636666 DDX19BQ9UMR2 479 aa8.36□□□□□ -1.07
EPB41-213ENST00000636666 HMOX1P09601 288 aa8.36□□□□□ -1.07
EPB41-213ENST00000636666 RBM42Q9BTD8 480 aaKnown RBP8.36□□□□□ -1.07
EPB41-213ENST00000636666 NASPP49321 788 aaPredicted RBP8.35□□□□□ -1.07
EPB41-213ENST00000636666 CAVIN1Q6NZI2 390 aaKnown RBP8.35□□□□□ -1.07
EPB41-213ENST00000636666 PLPPR3Q6T4P5 718 aa8.35□□□□□ -1.07
EPB41-213ENST00000636666 TMEM57Q8N5G2 664 aa8.35□□□□□ -1.07
EPB41-213ENST00000636666 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
EPB41-213ENST00000636666 CARD14Q9BXL6 1004 aa8.35□□□□□ -1.07
EPB41-213ENST00000636666 R3HCC1Q9Y3T6 440 aaKnown RBP8.35□□□□□ -1.07
EPB41-213ENST00000636666 GCC2Q8IWJ2 1684 aa8.35□□□□□ -1.07
EPB41-213ENST00000636666 LAMC3Q9Y6N6 1575 aa8.35□□□□□ -1.07
EPB41-213ENST00000636666 THUMPD2Q9BTF0 503 aaKnown RBP8.35□□□□□ -1.07
EPB41-213ENST00000636666 TNPO1Q92973 898 aaKnown RBP8.35□□□□□ -1.07
EPB41-213ENST00000636666 ZMYND15Q9H091 742 aa8.35□□□□□ -1.07
EPB41-213ENST00000636666 FBLN1P23142 703 aa8.34□□□□□ -1.07
EPB41-213ENST00000636666 MINK1Q8N4C8 1332 aaPredicted RBP8.34□□□□□ -1.07
EPB41-213ENST00000636666 PLEKHH2Q8IVE3 1493 aa8.34□□□□□ -1.07
EPB41-213ENST00000636666 KDM5CP41229 1560 aa8.34□□□□□ -1.07
EPB41-213ENST00000636666 KANK1Q14678 1352 aa8.34□□□□□ -1.07
EPB41-213ENST00000636666 USP19O94966 1318 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms