RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NUP155O75694 1391 aa21.89■■□□□ 1.09
CACNA1A-227ENST00000636549 CFAP44Q96MT7 982 aa21.88■■□□□ 1.09
CACNA1A-227ENST00000636549 COG3Q96JB2 828 aa21.88■■□□□ 1.09
CACNA1A-227ENST00000636549 CUX2O14529 1486 aa21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 ERICH2A1L162 156 aa21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 ST18O60284 1047 aa21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 SETQ01105 290 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 EPS15P42566 896 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 CPLX1O14810 134 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 RBM5P52756 815 aaKnown RBP eCLIP21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 WASHC4Q2M389 1173 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 TPM1P09493 284 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 NEXNQ0ZGT2 675 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 CENPJQ9HC77 1338 aaPredicted RBP21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 IFIT2P09913 472 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-227ENST00000636549 ATP2B1P20020 1258 aa21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 CCDC97Q96F63 343 aaPredicted RBP21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 RRP12Q5JTH9 1297 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 HMOX1P09601 288 aa21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 ATF3P18847 181 aa21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 PLCD3Q8N3E9 789 aa21.81■■□□□ 1.08
CACNA1A-227ENST00000636549 EEA1Q15075 1411 aa21.81■■□□□ 1.08
CACNA1A-227ENST00000636549 WWC2Q6AWC2 1192 aa21.81■■□□□ 1.08
CACNA1A-227ENST00000636549 CARMIL1Q5VZK9 1371 aa21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 RBM19Q9Y4C8 960 aaKnown RBP21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 BICD2Q8TD16 824 aa21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 RIC3Q7Z5B4 369 aa21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 NLRP2Q9NX02 1062 aa21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 HOMER1Q86YM7 354 aa21.79■■□□□ 1.08
CACNA1A-227ENST00000636549 TRDNQ13061 729 aa21.79■■□□□ 1.08
CACNA1A-227ENST00000636549 SPINK5Q9NQ38 1064 aaPredicted RBP21.79■■□□□ 1.08
CACNA1A-227ENST00000636549 PDILTQ8N807 584 aa21.78■■□□□ 1.08
CACNA1A-227ENST00000636549 CCDC70Q6NSX1 233 aa21.78■■□□□ 1.08
CACNA1A-227ENST00000636549 VPS37CA5D8V6 355 aaPredicted RBP21.78■■□□□ 1.08
CACNA1A-227ENST00000636549 EFCAB2Q5VUJ9 269 aa21.77■■□□□ 1.08
CACNA1A-227ENST00000636549 CCDC47Q96A33 483 aaKnown RBP21.77■■□□□ 1.08
CACNA1A-227ENST00000636549 KIF3AQ9Y496 699 aa21.76■■□□□ 1.07
CACNA1A-227ENST00000636549 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
CACNA1A-227ENST00000636549 AK7Q96M32 723 aa21.76■■□□□ 1.07
CACNA1A-227ENST00000636549 ECM2O94769 699 aaPredicted RBP21.75■■□□□ 1.07
CACNA1A-227ENST00000636549 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
CACNA1A-227ENST00000636549 LMOD3Q0VAK6 560 aa21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 HDAC5Q9UQL6 1122 aa21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 EIF3AQ14152 1382 aaKnown RBP21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 PHF14O94880 888 aa21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 FKBP5Q13451 457 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 BRPF1P55201 1214 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 DDX49Q9Y6V7 483 aaKnown RBP21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 ZNF771Q7L3S4 317 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 ZHX3Q9H4I2 956 aa21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 G3BP1Q13283 466 aaKnown RBP eCLIP21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 PIBF1Q8WXW3 757 aa21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 DNAJC2Q99543 621 aaKnown RBP21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 BICDL1Q6ZP65 573 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 PLCD4Q9BRC7 762 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 SPDYE4A6NLX3 237 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 MATR3P43243 847 aaKnown RBP eCLIP21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 GRM1Q13255 1194 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 ANKRD62A6NC57 917 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 TDRD9Q8NDG6 1382 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-227ENST00000636549 IPO7O95373 1038 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-227ENST00000636549 PANK3Q9H999 370 aa21.7■■□□□ 1.06
CACNA1A-227ENST00000636549 COG6Q9Y2V7 657 aa21.7■■□□□ 1.06
CACNA1A-227ENST00000636549 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
CACNA1A-227ENST00000636549 KANK4Q5T7N3 995 aaPredicted RBP21.7■■□□□ 1.06
CACNA1A-227ENST00000636549 ZNF219Q9P2Y4 722 aaPredicted RBP21.69■■□□□ 1.06
CACNA1A-227ENST00000636549 DDX54Q8TDD1 881 aaKnown RBP21.68■■□□□ 1.06
CACNA1A-227ENST00000636549 TSPYL4Q9UJ04 414 aa21.68■■□□□ 1.06
CACNA1A-227ENST00000636549 TTC16Q8NEE8 873 aa21.67■■□□□ 1.06
CACNA1A-227ENST00000636549 CPLX2Q6PUV4 134 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-227ENST00000636549 ANKRD20A12PQ8NF67 263 aa21.67■■□□□ 1.06
CACNA1A-227ENST00000636549 CEBPZQ03701 1054 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-227ENST00000636549 OFD1O75665 1012 aa21.66■■□□□ 1.06
CACNA1A-227ENST00000636549 RAPGEF4Q8WZA2 1011 aa21.66■■□□□ 1.06
CACNA1A-227ENST00000636549 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
CACNA1A-227ENST00000636549 CAGE1Q8TC20 777 aa21.65■■□□□ 1.06
CACNA1A-227ENST00000636549 RUFY1Q96T51 708 aa21.65■■□□□ 1.06
CACNA1A-227ENST00000636549 MAP4K4O95819 1239 aaPredicted RBP21.64■■□□□ 1.06
CACNA1A-227ENST00000636549 KRT18P05783 430 aaKnown RBP21.64■■□□□ 1.06
CACNA1A-227ENST00000636549 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.06
CACNA1A-227ENST00000636549 CHMP4AQ9BY43 222 aa21.64■■□□□ 1.05
CACNA1A-227ENST00000636549 ESCO1Q5FWF5 840 aa21.63■■□□□ 1.05
CACNA1A-227ENST00000636549 ZSCAN29Q8IWY8 852 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-227ENST00000636549 SETD5Q9C0A6 1442 aa21.63■■□□□ 1.05
CACNA1A-227ENST00000636549 MPHOSPH10O00566 681 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-227ENST00000636549 RIPK4P57078 832 aa21.62■■□□□ 1.05
CACNA1A-227ENST00000636549 DDX58O95786 925 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-227ENST00000636549 CDK5RAP3Q96JB5 506 aa21.61■■□□□ 1.05
CACNA1A-227ENST00000636549 CRBNQ96SW2 442 aa21.61■■□□□ 1.05
CACNA1A-227ENST00000636549 CA8P35219 290 aa21.61■■□□□ 1.05
CACNA1A-227ENST00000636549 NEFHP12036 1026 aa21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 SOGA1O94964 1423 aa21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 RALBP1Q15311 655 aa21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 ZKSCAN1P17029 563 aaPredicted RBP21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 RALYLQ86SE5 291 aaKnown RBP21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 PSMD1Q99460 953 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms