RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NUP155O75694 1391 aa21.89■■□□□ 1.09
CACNA1A-227ENST00000636549 CFAP44Q96MT7 982 aa21.88■■□□□ 1.09
CACNA1A-227ENST00000636549 COG3Q96JB2 828 aa21.88■■□□□ 1.09
CACNA1A-227ENST00000636549 CUX2O14529 1486 aa21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 ERICH2A1L162 156 aa21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 ST18O60284 1047 aa21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 SETQ01105 290 aaPredicted RBP21.87■■□□□ 1.09
CACNA1A-227ENST00000636549 EPS15P42566 896 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 CPLX1O14810 134 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 RBM5P52756 815 aaKnown RBP eCLIP21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 WASHC4Q2M389 1173 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 TPM1P09493 284 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 NEXNQ0ZGT2 675 aa21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 CENPJQ9HC77 1338 aaPredicted RBP21.86■■□□□ 1.09
CACNA1A-227ENST00000636549 IFIT2P09913 472 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-227ENST00000636549 ATP2B1P20020 1258 aa21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 CCDC97Q96F63 343 aaPredicted RBP21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 RRP12Q5JTH9 1297 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 HMOX1P09601 288 aa21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 ATF3P18847 181 aa21.82■■□□□ 1.08
CACNA1A-227ENST00000636549 PLCD3Q8N3E9 789 aa21.81■■□□□ 1.08
CACNA1A-227ENST00000636549 EEA1Q15075 1411 aa21.81■■□□□ 1.08
CACNA1A-227ENST00000636549 WWC2Q6AWC2 1192 aa21.81■■□□□ 1.08
CACNA1A-227ENST00000636549 CARMIL1Q5VZK9 1371 aa21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 RBM19Q9Y4C8 960 aaKnown RBP21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 BICD2Q8TD16 824 aa21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 RIC3Q7Z5B4 369 aa21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 NLRP2Q9NX02 1062 aa21.8■■□□□ 1.08
CACNA1A-227ENST00000636549 HOMER1Q86YM7 354 aa21.79■■□□□ 1.08
CACNA1A-227ENST00000636549 TRDNQ13061 729 aa21.79■■□□□ 1.08
CACNA1A-227ENST00000636549 SPINK5Q9NQ38 1064 aaPredicted RBP21.79■■□□□ 1.08
CACNA1A-227ENST00000636549 PDILTQ8N807 584 aa21.78■■□□□ 1.08
CACNA1A-227ENST00000636549 CCDC70Q6NSX1 233 aa21.78■■□□□ 1.08
CACNA1A-227ENST00000636549 VPS37CA5D8V6 355 aaPredicted RBP21.78■■□□□ 1.08
CACNA1A-227ENST00000636549 EFCAB2Q5VUJ9 269 aa21.77■■□□□ 1.08
CACNA1A-227ENST00000636549 CCDC47Q96A33 483 aaKnown RBP21.77■■□□□ 1.08
CACNA1A-227ENST00000636549 KIF3AQ9Y496 699 aa21.76■■□□□ 1.07
CACNA1A-227ENST00000636549 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
CACNA1A-227ENST00000636549 AK7Q96M32 723 aa21.76■■□□□ 1.07
CACNA1A-227ENST00000636549 ECM2O94769 699 aaPredicted RBP21.75■■□□□ 1.07
CACNA1A-227ENST00000636549 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
CACNA1A-227ENST00000636549 LMOD3Q0VAK6 560 aa21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 HDAC5Q9UQL6 1122 aa21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 EIF3AQ14152 1382 aaKnown RBP21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 PHF14O94880 888 aa21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 FKBP5Q13451 457 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 BRPF1P55201 1214 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-227ENST00000636549 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 DDX49Q9Y6V7 483 aaKnown RBP21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 ZNF771Q7L3S4 317 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 ZHX3Q9H4I2 956 aa21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 G3BP1Q13283 466 aaKnown RBP eCLIP21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 PIBF1Q8WXW3 757 aa21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 DNAJC2Q99543 621 aaKnown RBP21.73■■□□□ 1.07
CACNA1A-227ENST00000636549 BICDL1Q6ZP65 573 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 PLCD4Q9BRC7 762 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 SPDYE4A6NLX3 237 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 MATR3P43243 847 aaKnown RBP eCLIP21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 GRM1Q13255 1194 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 ANKRD62A6NC57 917 aa21.72■■□□□ 1.07
CACNA1A-227ENST00000636549 TDRD9Q8NDG6 1382 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-227ENST00000636549 IPO7O95373 1038 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-227ENST00000636549 PANK3Q9H999 370 aa21.7■■□□□ 1.06
CACNA1A-227ENST00000636549 COG6Q9Y2V7 657 aa21.7■■□□□ 1.06
CACNA1A-227ENST00000636549 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
CACNA1A-227ENST00000636549 KANK4Q5T7N3 995 aaPredicted RBP21.7■■□□□ 1.06
CACNA1A-227ENST00000636549 ZNF219Q9P2Y4 722 aaPredicted RBP21.69■■□□□ 1.06
CACNA1A-227ENST00000636549 DDX54Q8TDD1 881 aaKnown RBP21.68■■□□□ 1.06
CACNA1A-227ENST00000636549 TSPYL4Q9UJ04 414 aa21.68■■□□□ 1.06
CACNA1A-227ENST00000636549 TTC16Q8NEE8 873 aa21.67■■□□□ 1.06
CACNA1A-227ENST00000636549 CPLX2Q6PUV4 134 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-227ENST00000636549 ANKRD20A12PQ8NF67 263 aa21.67■■□□□ 1.06
CACNA1A-227ENST00000636549 CEBPZQ03701 1054 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-227ENST00000636549 OFD1O75665 1012 aa21.66■■□□□ 1.06
CACNA1A-227ENST00000636549 RAPGEF4Q8WZA2 1011 aa21.66■■□□□ 1.06
CACNA1A-227ENST00000636549 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
CACNA1A-227ENST00000636549 CAGE1Q8TC20 777 aa21.65■■□□□ 1.06
CACNA1A-227ENST00000636549 RUFY1Q96T51 708 aa21.65■■□□□ 1.06
CACNA1A-227ENST00000636549 MAP4K4O95819 1239 aaPredicted RBP21.64■■□□□ 1.06
CACNA1A-227ENST00000636549 KRT18P05783 430 aaKnown RBP21.64■■□□□ 1.06
CACNA1A-227ENST00000636549 FHAD1B1AJZ9 1412 aa21.64■■□□□ 1.06
CACNA1A-227ENST00000636549 CHMP4AQ9BY43 222 aa21.64■■□□□ 1.05
CACNA1A-227ENST00000636549 ESCO1Q5FWF5 840 aa21.63■■□□□ 1.05
CACNA1A-227ENST00000636549 ZSCAN29Q8IWY8 852 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-227ENST00000636549 SETD5Q9C0A6 1442 aa21.63■■□□□ 1.05
CACNA1A-227ENST00000636549 MPHOSPH10O00566 681 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-227ENST00000636549 RIPK4P57078 832 aa21.62■■□□□ 1.05
CACNA1A-227ENST00000636549 DDX58O95786 925 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-227ENST00000636549 CDK5RAP3Q96JB5 506 aa21.61■■□□□ 1.05
CACNA1A-227ENST00000636549 CRBNQ96SW2 442 aa21.61■■□□□ 1.05
CACNA1A-227ENST00000636549 CA8P35219 290 aa21.61■■□□□ 1.05
CACNA1A-227ENST00000636549 NEFHP12036 1026 aa21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 SOGA1O94964 1423 aa21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 RALBP1Q15311 655 aa21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 ZKSCAN1P17029 563 aaPredicted RBP21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 RALYLQ86SE5 291 aaKnown RBP21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 PSMD1Q99460 953 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms