RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 SLAIN2Q9P270 581 aa8.93□□□□□ -0.98
CLN5-210ENST00000636520 ZNF652Q9Y2D9 606 aa8.93□□□□□ -0.98
CLN5-210ENST00000636520 EPRSP07814 1512 aaKnown RBP8.93□□□□□ -0.98
CLN5-210ENST00000636520 DPY19L2Q6NUT2 758 aa8.93□□□□□ -0.98
CLN5-210ENST00000636520 FYCO1Q9BQS8 1478 aa8.93□□□□□ -0.98
CLN5-210ENST00000636520 ZC3H6P61129 1189 aaKnown RBP8.93□□□□□ -0.98
CLN5-210ENST00000636520 NEXNQ0ZGT2 675 aa8.93□□□□□ -0.98
CLN5-210ENST00000636520 DDB1Q16531 1140 aa8.93□□□□□ -0.98
CLN5-210ENST00000636520 FLAD1Q8NFF5 587 aa8.93□□□□□ -0.98
CLN5-210ENST00000636520 MIA2Q96PC5 1412 aa8.92□□□□□ -0.98
CLN5-210ENST00000636520 WWC1Q8IX03 1113 aa8.92□□□□□ -0.98
CLN5-210ENST00000636520 TMOD2Q9NZR1 351 aa8.92□□□□□ -0.98
CLN5-210ENST00000636520 PRDM2Q13029 1718 aa8.92□□□□□ -0.98
CLN5-210ENST00000636520 NUTM2GQ5VZR2 741 aa8.91□□□□□ -0.98
CLN5-210ENST00000636520 CCDC125Q86Z20 511 aa8.91□□□□□ -0.98
CLN5-210ENST00000636520 TROQ12816 1431 aaPredicted RBP8.9□□□□□ -0.98
CLN5-210ENST00000636520 NCBP3Q53F19 620 aaKnown RBP8.9□□□□□ -0.98
CLN5-210ENST00000636520 ERICH6Q7L0X2 663 aa8.9□□□□□ -0.98
CLN5-210ENST00000636520 SPON1Q9HCB6 807 aa8.9□□□□□ -0.98
CLN5-210ENST00000636520 UHRF1BP1LA0JNW5 1464 aa8.9□□□□□ -0.98
CLN5-210ENST00000636520 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.99
CLN5-210ENST00000636520 ABCA10Q8WWZ4 1543 aa8.9□□□□□ -0.99
CLN5-210ENST00000636520 XPCQ01831 940 aaPredicted RBP8.9□□□□□ -0.99
CLN5-210ENST00000636520 JDP2Q8WYK2 163 aa8.9□□□□□ -0.99
CLN5-210ENST00000636520 DDX58O95786 925 aaKnown RBP8.89□□□□□ -0.99
CLN5-210ENST00000636520 KIF6Q6ZMV9 814 aa8.89□□□□□ -0.99
CLN5-210ENST00000636520 YEATS2Q9ULM3 1422 aa8.89□□□□□ -0.99
CLN5-210ENST00000636520 PARP3Q9Y6F1 533 aa8.88□□□□□ -0.99
CLN5-210ENST00000636520 NEUROD2Q15784 382 aa8.88□□□□□ -0.99
CLN5-210ENST00000636520 FAM196AQ6ZSG2 479 aa8.88□□□□□ -0.99
CLN5-210ENST00000636520 CABP4P57796 275 aa8.88□□□□□ -0.99
CLN5-210ENST00000636520 GRIN3BO60391 1043 aa8.88□□□□□ -0.99
CLN5-210ENST00000636520 WDR62O43379 1518 aa8.87□□□□□ -0.99
CLN5-210ENST00000636520 RFC4P35249 363 aa8.87□□□□□ -0.99
CLN5-210ENST00000636520 MS4A1P11836 297 aa8.87□□□□□ -0.99
CLN5-210ENST00000636520 NCOA2Q15596 1464 aa8.87□□□□□ -0.99
CLN5-210ENST00000636520 STARD3NLO95772 234 aa8.87□□□□□ -0.99
CLN5-210ENST00000636520 A0A087WZG4 1122 aa8.86□□□□□ -0.99
CLN5-210ENST00000636520 CNKSR2Q8WXI2 1034 aa8.86□□□□□ -0.99
CLN5-210ENST00000636520 BCL2L13Q9BXK5 485 aa8.86□□□□□ -0.99
CLN5-210ENST00000636520 RPRD2Q5VT52 1461 aaKnown RBP8.86□□□□□ -0.99
CLN5-210ENST00000636520 TMOD3Q9NYL9 352 aa8.86□□□□□ -0.99
CLN5-210ENST00000636520 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
CLN5-210ENST00000636520 ZMYM3Q14202 1370 aa8.85□□□□□ -0.99
CLN5-210ENST00000636520 ANKRD30BQ9BXX2 1392 aa8.85□□□□□ -0.99
CLN5-210ENST00000636520 CENPJQ9HC77 1338 aaPredicted RBP8.85□□□□□ -0.99
CLN5-210ENST00000636520 U2AF1L5P0DN76 240 aaPredicted RBP8.85□□□□□ -0.99
CLN5-210ENST00000636520 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
CLN5-210ENST00000636520 U2AF1Q01081 240 aaKnown RBP eCLIP8.85□□□□□ -0.99
CLN5-210ENST00000636520 EIF5BO60841 1220 aaKnown RBP8.85□□□□□ -0.99
CLN5-210ENST00000636520 FBXO31Q5XUX0 539 aaPredicted RBP8.85□□□□□ -0.99
CLN5-210ENST00000636520 TOP2BQ02880 1626 aa8.85□□□□□ -0.99
CLN5-210ENST00000636520 ROCK2O75116 1388 aaKnown RBP8.85□□□□□ -0.99
CLN5-210ENST00000636520 TULP1O00294 542 aaPredicted RBP8.85□□□□□ -0.99
CLN5-210ENST00000636520 ERICH3Q5RHP9 1530 aa8.85□□□□□ -0.99
CLN5-210ENST00000636520 ABCC2Q92887 1545 aa8.85□□□□□ -0.99
CLN5-210ENST00000636520 KRT27Q7Z3Y8 459 aa8.84□□□□□ -0.99
CLN5-210ENST00000636520 TBX22Q9Y458 520 aa8.84□□□□□ -0.99
CLN5-210ENST00000636520 MPHOSPH9Q99550 1183 aa8.84□□□□□ -0.99
CLN5-210ENST00000636520 C9orf84Q5VXU9 1444 aa8.84□□□□□ -0.99
CLN5-210ENST00000636520 KDM6BO15054 1643 aa8.83□□□□□ -1
CLN5-210ENST00000636520 CGNL1Q0VF96 1302 aa8.83□□□□□ -1
CLN5-210ENST00000636520 ZNF622Q969S3 477 aaKnown RBP eCLIP8.83□□□□□ -1
CLN5-210ENST00000636520 CDK19Q9BWU1 502 aa8.83□□□□□ -1
CLN5-210ENST00000636520 CCDC61Q9Y6R9 512 aa8.83□□□□□ -1
CLN5-210ENST00000636520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.83□□□□□ -1
CLN5-210ENST00000636520 ATP10AO60312 1499 aa8.83□□□□□ -1
CLN5-210ENST00000636520 ZNF518AQ6AHZ1 1483 aa8.83□□□□□ -1
CLN5-210ENST00000636520 TRAPPC8Q9Y2L5 1435 aa8.83□□□□□ -1
CLN5-210ENST00000636520 CCDC87Q9NVE4 849 aa8.83□□□□□ -1
CLN5-210ENST00000636520 BIN2Q9UBW5 565 aaPredicted RBP8.83□□□□□ -1
CLN5-210ENST00000636520 TCEAL9Q9UHQ7 104 aa8.83□□□□□ -1
CLN5-210ENST00000636520 ST5P78524 1137 aa8.82□□□□□ -1
CLN5-210ENST00000636520 RRBP1Q9P2E9 1410 aaKnown RBP8.82□□□□□ -1
CLN5-210ENST00000636520 FGD1P98174 961 aa8.82□□□□□ -1
CLN5-210ENST00000636520 PRAM1Q96QH2 718 aa8.82□□□□□ -1
CLN5-210ENST00000636520 SENP3-EIF4A1A0A087X0R7 540 aa8.82□□□□□ -1
CLN5-210ENST00000636520 ATAD2Q6PL18 1390 aa8.81□□□□□ -1
CLN5-210ENST00000636520 RTEL1-TNFRSF6BF6WH68 1400 aa8.81□□□□□ -1
CLN5-210ENST00000636520 IQGAP2Q13576 1575 aa8.81□□□□□ -1
CLN5-210ENST00000636520 CLSTN1O94985 981 aa8.81□□□□□ -1
CLN5-210ENST00000636520 LRRFIP1Q32MZ4 808 aaKnown RBP8.81□□□□□ -1
CLN5-210ENST00000636520 RPGRQ92834 1020 aaKnown RBP8.81□□□□□ -1
CLN5-210ENST00000636520 JCADQ9P266 1359 aa8.81□□□□□ -1
CLN5-210ENST00000636520 SPATA31A6Q5VVP1 1343 aa8.8□□□□□ -1
CLN5-210ENST00000636520 NGEFQ8N5V2 710 aa8.8□□□□□ -1
CLN5-210ENST00000636520 YY1P25490 414 aa8.8□□□□□ -1
CLN5-210ENST00000636520 HSPA1LP34931 641 aa8.8□□□□□ -1
CLN5-210ENST00000636520 TEX13AQ9BXU3 409 aaPredicted RBP8.8□□□□□ -1
CLN5-210ENST00000636520 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
CLN5-210ENST00000636520 HDAC9Q9UKV0 1011 aa8.8□□□□□ -1
CLN5-210ENST00000636520 MYO1BO43795 1136 aa8.79□□□□□ -1
CLN5-210ENST00000636520 TMEM87AQ8NBN3 555 aa8.79□□□□□ -1
CLN5-210ENST00000636520 NEO1Q92859 1461 aa8.79□□□□□ -1
CLN5-210ENST00000636520 ANKRD50Q9ULJ7 1429 aa8.79□□□□□ -1
CLN5-210ENST00000636520 RBM5P52756 815 aaKnown RBP eCLIP8.79□□□□□ -1
CLN5-210ENST00000636520 FTSJ3Q8IY81 847 aaKnown RBP8.79□□□□□ -1
CLN5-210ENST00000636520 DHX29Q7Z478 1369 aaKnown RBP8.79□□□□□ -1
CLN5-210ENST00000636520 ABCC10Q5T3U5 1492 aa8.79□□□□□ -1
CLN5-210ENST00000636520 SOCS7O14512 581 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms