RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 APLP1P51693 650 aa3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 HNRNPMP52272 730 aaKnown RBP eCLIP3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 TXNDC2Q86VQ3 553 aa3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 ZNF526Q8TF50 670 aaPredicted RBP3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 LRRC59Q96AG4 307 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 GJD4Q96KN9 370 aaPredicted RBP3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 GPBP1L1Q9HC44 474 aaPredicted RBP3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 CCDC9Q9Y3X0 531 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 SHANK3Q9BYB0 1731 aa3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 MYOM1P52179 1685 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 ADGRB2O60241 1585 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 PZPP20742 1482 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 NKTRP30414 1462 aaKnown RBP3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 ARHGAP23Q9P227 1491 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 MIA2Q96PC5 1412 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 PNPLA6Q8IY17 1366 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 SPAG9O60271 1321 aaKnown RBP3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 RANGAP1P46060 587 aaPredicted RBP3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 EZH2Q15910 746 aaKnown RBP3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 KRT27Q7Z3Y8 459 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 CADPS2Q86UW7 1296 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 SEPT12Q8IYM1 358 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 SLC26A8Q96RN1 970 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 ATP1B4Q9UN42 357 aaPredicted RBP3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 SAMD9Q5K651 1589 aa3.04□□□□□ -1.92
SYNGAP1-215ENST00000636443 ASXL1Q8IXJ9 1541 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 DLC1Q96QB1 1528 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 A2MP01023 1474 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 CAMSAP2Q08AD1 1489 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 SETD5Q9C0A6 1442 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 UBR1Q8IWV7 1749 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 MLLT1Q03111 559 aaPredicted RBP3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 BRINP3Q76B58 766 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 KLHL34Q8N239 644 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 STAG3Q9UJ98 1225 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 MAST1Q9Y2H9 1570 aa3.03□□□□□ -1.92
SYNGAP1-215ENST00000636443 PTCH1Q13635 1447 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 ATP10DQ9P241 1426 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 WASHC2CQ9Y4E1 1318 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 MROH1Q8NDA8 1641 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 LTKP29376 864 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 FNBP4Q8N3X1 1017 aaPredicted RBP3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 DDX17Q92841 729 aaKnown RBP3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 FHDC1Q9C0D6 1143 aaPredicted RBP3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 ZNF777Q9ULD5 760 aaPredicted RBP3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 PLXNC1O60486 1568 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 GLI3P10071 1580 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 SAMD9LQ8IVG5 1584 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 NCOA2Q15596 1464 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 NUP188Q5SRE5 1749 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 WDR90Q96KV7 1748 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 TNS1Q9HBL0 1735 aaKnown RBP3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 MARF1Q9Y4F3 1742 aaKnown RBP3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 CDC42BPBQ9Y5S2 1711 aa3.02□□□□□ -1.93
SYNGAP1-215ENST00000636443 PPP1R15AO75807 674 aaPredicted RBP3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 ZBTB7AO95365 584 aa3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 APBA3O96018 575 aa3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 CFAP44Q96MT7 982 aa3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 SYT17Q9BSW7 474 aa3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 GPATCH8Q9UKJ3 1502 aaKnown RBP3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 KIAA1210Q9ULL0 1709 aa3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 CFAP65Q6ZU64 1925 aaKnown RBP3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 CLIP1P30622 1438 aa3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 PREX2Q70Z35 1606 aa3.01□□□□□ -1.93
SYNGAP1-215ENST00000636443 USP19O94966 1318 aa3□□□□□ -1.93
SYNGAP1-215ENST00000636443 SYCP2Q9BX26 1530 aa3□□□□□ -1.93
SYNGAP1-215ENST00000636443 HSPA1AP0DMV8 641 aaKnown RBP3□□□□□ -1.93
SYNGAP1-215ENST00000636443 HSPA1BP0DMV9 641 aaKnown RBP3□□□□□ -1.93
SYNGAP1-215ENST00000636443 FAM182BQ5T319 152 aa3□□□□□ -1.93
SYNGAP1-215ENST00000636443 DNAJC5GQ8N7S2 189 aa3□□□□□ -1.93
SYNGAP1-215ENST00000636443 KLRG1Q96E93 195 aa3□□□□□ -1.93
SYNGAP1-215ENST00000636443 CDK11AQ9UQ88 783 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-215ENST00000636443 ATF5Q9Y2D1 282 aaPredicted RBP3□□□□□ -1.93
SYNGAP1-215ENST00000636443 RREB1Q92766 1687 aa3□□□□□ -1.93
SYNGAP1-215ENST00000636443 PARD3Q8TEW0 1356 aa3□□□□□ -1.93
SYNGAP1-215ENST00000636443 SLIT1O75093 1534 aa2.99□□□□□ -1.93
SYNGAP1-215ENST00000636443 KIF3BO15066 747 aa2.99□□□□□ -1.93
SYNGAP1-215ENST00000636443 TRIM37O94972 964 aa2.99□□□□□ -1.93
SYNGAP1-215ENST00000636443 HAP1P54257 671 aaPredicted RBP2.99□□□□□ -1.93
SYNGAP1-215ENST00000636443 HTRA3P83110 453 aa2.99□□□□□ -1.93
SYNGAP1-215ENST00000636443 UNC5CLQ8IV45 518 aa2.99□□□□□ -1.93
SYNGAP1-215ENST00000636443 C19orf44Q9H6X5 657 aa2.99□□□□□ -1.93
SYNGAP1-215ENST00000636443 FMN1Q68DA7 1419 aa2.99□□□□□ -1.93
SYNGAP1-215ENST00000636443 INO80Q9ULG1 1556 aaPredicted RBP2.99□□□□□ -1.93
SYNGAP1-215ENST00000636443 CHD2O14647 1828 aaKnown RBP2.98□□□□□ -1.93
SYNGAP1-215ENST00000636443 ERVK-7P63135 1459 aa2.98□□□□□ -1.93
SYNGAP1-215ENST00000636443 ARHGAP35Q9NRY4 1499 aa2.98□□□□□ -1.93
SYNGAP1-215ENST00000636443 CCDC85CA6NKD9 419 aa2.98□□□□□ -1.93
SYNGAP1-215ENST00000636443 PLEKHG5O94827 1062 aa2.98□□□□□ -1.93
SYNGAP1-215ENST00000636443 MPNDQ8N594 471 aa2.98□□□□□ -1.93
SYNGAP1-215ENST00000636443 JMYQ8N9B5 988 aa2.98□□□□□ -1.93
SYNGAP1-215ENST00000636443 CAMKK2Q96RR4 588 aa2.98□□□□□ -1.93
SYNGAP1-215ENST00000636443 DISP2A7MBM2 1401 aa2.98□□□□□ -1.93
SYNGAP1-215ENST00000636443 CASZ1Q86V15 1759 aa2.97□□□□□ -1.93
SYNGAP1-215ENST00000636443 PIK3C2BO00750 1634 aa2.97□□□□□ -1.93
SYNGAP1-215ENST00000636443 NCOA3Q9Y6Q9 1424 aa2.97□□□□□ -1.93
SYNGAP1-215ENST00000636443 DLL1O00548 723 aa2.97□□□□□ -1.93
SYNGAP1-215ENST00000636443 FAM98CQ17RN3 349 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms