RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 TMEM134Q9H6X4 195 aa4.78□□□□□ -1.64
CD46-219ENST00000636114 GPCPD1Q9NPB8 672 aa4.78□□□□□ -1.64
CD46-219ENST00000636114 HDGFP51858 240 aaKnown RBP4.77□□□□□ -1.65
CD46-219ENST00000636114 NLRP7Q8WX94 980 aa4.77□□□□□ -1.65
CD46-219ENST00000636114 ZFRQ96KR1 1074 aaKnown RBP4.77□□□□□ -1.65
CD46-219ENST00000636114 GIGYF2Q6Y7W6 1299 aaKnown RBP4.77□□□□□ -1.65
CD46-219ENST00000636114 TMUB1Q9BVT8 246 aa4.77□□□□□ -1.65
CD46-219ENST00000636114 GOLGA8CPA6NN73 597 aa4.76□□□□□ -1.65
CD46-219ENST00000636114 SLC4A3P48751 1232 aa4.76□□□□□ -1.65
CD46-219ENST00000636114 GPBP1L1Q9HC44 474 aaPredicted RBP4.76□□□□□ -1.65
CD46-219ENST00000636114 DAXXQ9UER7 740 aaPredicted RBP4.76□□□□□ -1.65
CD46-219ENST00000636114 SULF1Q8IWU6 871 aa4.76□□□□□ -1.65
CD46-219ENST00000636114 ANKK1Q8NFD2 765 aa4.76□□□□□ -1.65
CD46-219ENST00000636114 REPIN1Q9BWE0 567 aaKnown RBP4.76□□□□□ -1.65
CD46-219ENST00000636114 KDM4CQ9H3R0 1056 aa4.76□□□□□ -1.65
CD46-219ENST00000636114 SWT1Q5T5J6 900 aaKnown RBP4.75□□□□□ -1.65
CD46-219ENST00000636114 SAMD7Q7Z3H4 446 aa4.75□□□□□ -1.65
CD46-219ENST00000636114 FAM217BQ9NTX9 383 aaPredicted RBP4.75□□□□□ -1.65
CD46-219ENST00000636114 LRCH3Q96II8 777 aa4.74□□□□□ -1.65
CD46-219ENST00000636114 SLF2Q8IX21 1173 aa4.74□□□□□ -1.65
CD46-219ENST00000636114 WNT2BQ93097 391 aa4.74□□□□□ -1.65
CD46-219ENST00000636114 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.74□□□□□ -1.65
CD46-219ENST00000636114 DDX11L8A8MPP1 907 aa4.73□□□□□ -1.65
CD46-219ENST00000636114 SSTR3P32745 418 aaPredicted RBP4.73□□□□□ -1.65
CD46-219ENST00000636114 RSPH4AQ5TD94 716 aa4.73□□□□□ -1.65
CD46-219ENST00000636114 NECTIN2Q92692 538 aa4.73□□□□□ -1.65
CD46-219ENST00000636114 SOWAHBA6NEL2 793 aa4.73□□□□□ -1.65
CD46-219ENST00000636114 RNF40O75150 1001 aa4.73□□□□□ -1.65
CD46-219ENST00000636114 MS4A1P11836 297 aa4.73□□□□□ -1.65
CD46-219ENST00000636114 DDRGK1Q96HY6 314 aa4.73□□□□□ -1.65
CD46-219ENST00000636114 MYT1LQ9UL68 1186 aa4.73□□□□□ -1.65
CD46-219ENST00000636114 CD46P15529 392 aa4.72□□□□□ -1.65
CD46-219ENST00000636114 RDH13Q8NBN7 331 aa4.72□□□□□ -1.65
CD46-219ENST00000636114 BCAMP50895 628 aa4.71□□□□□ -1.65
CD46-219ENST00000636114 KCTD12Q96CX2 325 aaKnown RBP4.71□□□□□ -1.65
CD46-219ENST00000636114 THSD4Q6ZMP0 1018 aa4.71□□□□□ -1.66
CD46-219ENST00000636114 BEGAINQ9BUH8 593 aa4.71□□□□□ -1.66
CD46-219ENST00000636114 FAM117AQ9C073 453 aa4.71□□□□□ -1.66
CD46-219ENST00000636114 SLC10A3P09131 477 aa4.7□□□□□ -1.66
CD46-219ENST00000636114 TSR3Q9UJK0 312 aaKnown RBP4.7□□□□□ -1.66
CD46-219ENST00000636114 HPS5Q9UPZ3 1129 aa4.7□□□□□ -1.66
CD46-219ENST00000636114 PPP4CP60510 307 aa4.69□□□□□ -1.66
CD46-219ENST00000636114 CFHP08603 1231 aa4.69□□□□□ -1.66
CD46-219ENST00000636114 GCGRP47871 477 aa4.69□□□□□ -1.66
CD46-219ENST00000636114 PRR14Q9BWN1 585 aa4.69□□□□□ -1.66
CD46-219ENST00000636114 PLEKHG3A1L390 1219 aa4.68□□□□□ -1.66
CD46-219ENST00000636114 DIXDC1Q155Q3 683 aa4.68□□□□□ -1.66
CD46-219ENST00000636114 NYAP1Q6ZVC0 841 aa4.68□□□□□ -1.66
CD46-219ENST00000636114 IL27Q8NEV9 243 aa4.68□□□□□ -1.66
CD46-219ENST00000636114 RNF166Q96A37 237 aaPredicted RBP4.68□□□□□ -1.66
CD46-219ENST00000636114 USP46P62068 366 aa4.68□□□□□ -1.66
CD46-219ENST00000636114 KMT5BQ4FZB7 885 aa4.68□□□□□ -1.66
CD46-219ENST00000636114 NUTM1Q86Y26 1132 aa4.68□□□□□ -1.66
CD46-219ENST00000636114 WBP1LQ9NX94 342 aa4.68□□□□□ -1.66
CD46-219ENST00000636114 KDM4AO75164 1064 aa4.67□□□□□ -1.66
CD46-219ENST00000636114 RSPH6AQ9H0K4 717 aa4.67□□□□□ -1.66
CD46-219ENST00000636114 TMEM132AQ24JP5 1023 aa4.66□□□□□ -1.66
CD46-219ENST00000636114 ACTN4O43707 911 aaKnown RBP4.66□□□□□ -1.66
CD46-219ENST00000636114 APLP1P51693 650 aa4.66□□□□□ -1.66
CD46-219ENST00000636114 PTPN5P54829 565 aa4.66□□□□□ -1.66
CD46-219ENST00000636114 SPIRE2Q8WWL2 714 aa4.66□□□□□ -1.66
CD46-219ENST00000636114 TBC1D2Q9BYX2 928 aa4.66□□□□□ -1.66
CD46-219ENST00000636114 CCDC180Q9P1Z9 1646 aa4.65□□□□□ -1.66
CD46-219ENST00000636114 FUT2Q10981 343 aa4.65□□□□□ -1.66
CD46-219ENST00000636114 GRIPAP1Q4V328 841 aa4.65□□□□□ -1.66
CD46-219ENST00000636114 SH3D19Q5HYK7 790 aa4.65□□□□□ -1.66
CD46-219ENST00000636114 GOPCQ9HD26 462 aa4.65□□□□□ -1.66
CD46-219ENST00000636114 HOXA2O43364 376 aa4.65□□□□□ -1.67
CD46-219ENST00000636114 ATP6V1AP38606 617 aa4.65□□□□□ -1.67
CD46-219ENST00000636114 MYSM1Q5VVJ2 828 aa4.65□□□□□ -1.67
CD46-219ENST00000636114 HCSTQ9UBK5 93 aa4.65□□□□□ -1.67
CD46-219ENST00000636114 GJA5P36382 358 aa4.64□□□□□ -1.67
CD46-219ENST00000636114 PCDHB3Q9Y5E6 796 aa4.64□□□□□ -1.67
CD46-219ENST00000636114 MOXD2PA6NHM9 499 aa4.63□□□□□ -1.67
CD46-219ENST00000636114 SKIV2LQ15477 1246 aaKnown RBP4.63□□□□□ -1.67
CD46-219ENST00000636114 CLK2P49760 499 aaKnown RBP4.63□□□□□ -1.67
CD46-219ENST00000636114 RSBN1LQ6PCB5 846 aaPredicted RBP4.63□□□□□ -1.67
CD46-219ENST00000636114 SPTLC1O15269 473 aa4.62□□□□□ -1.67
CD46-219ENST00000636114 PUS10Q3MIT2 529 aaKnown RBP4.62□□□□□ -1.67
CD46-219ENST00000636114 MORN1Q5T089 497 aa4.62□□□□□ -1.67
CD46-219ENST00000636114 RIC3Q7Z5B4 369 aa4.62□□□□□ -1.67
CD46-219ENST00000636114 PCMTD1Q96MG8 357 aaPredicted RBP4.62□□□□□ -1.67
CD46-219ENST00000636114 POLR3EQ9NVU0 708 aa4.62□□□□□ -1.67
CD46-219ENST00000636114 NR1I2O75469 434 aa4.61□□□□□ -1.67
CD46-219ENST00000636114 RGS20O76081 388 aa4.61□□□□□ -1.67
CD46-219ENST00000636114 FDX1P10109 184 aa4.61□□□□□ -1.67
CD46-219ENST00000636114 NDUFV2P19404 249 aa4.61□□□□□ -1.67
CD46-219ENST00000636114 TUSC1Q2TAM9 212 aa4.61□□□□□ -1.67
CD46-219ENST00000636114 HLA-CQ95604 372 aa4.61□□□□□ -1.67
CD46-219ENST00000636114 BLOC1S3Q6QNY0 202 aa4.61□□□□□ -1.67
CD46-219ENST00000636114 LIMD1Q9UGP4 676 aa4.61□□□□□ -1.67
CD46-219ENST00000636114 COPS2P61201 443 aa4.6□□□□□ -1.67
CD46-219ENST00000636114 GUCA2AQ02747 115 aa4.6□□□□□ -1.67
CD46-219ENST00000636114 Q3C1V9 767 aa4.6□□□□□ -1.67
CD46-219ENST00000636114 MTRQ99707 1265 aa4.6□□□□□ -1.67
CD46-219ENST00000636114 ATP1B4Q9UN42 357 aaPredicted RBP4.6□□□□□ -1.67
CD46-219ENST00000636114 SLC27A5Q9Y2P5 690 aa4.6□□□□□ -1.67
CD46-219ENST00000636114 PRPF38BQ5VTL8 546 aaKnown RBP4.6□□□□□ -1.67
CD46-219ENST00000636114 SCUBE3Q8IX30 993 aa4.6□□□□□ -1.67
CD46-219ENST00000636114 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms