RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 SYNMO15061 1565 aa17.46■□□□□ 0.39
CACNA1A-219ENST00000635917 NRXN1Q9ULB1 1477 aa17.45■□□□□ 0.38
CACNA1A-219ENST00000635917 PPLO60437 1756 aa17.44■□□□□ 0.38
CACNA1A-219ENST00000635917 ARHGEF40Q8TER5 1519 aa17.43■□□□□ 0.38
CACNA1A-219ENST00000635917 TESK2Q96S53 571 aa17.42■□□□□ 0.38
CACNA1A-219ENST00000635917 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
CACNA1A-219ENST00000635917 PPP4R3CPQ6ZMV5 832 aa17.41■□□□□ 0.38
CACNA1A-219ENST00000635917 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-219ENST00000635917 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
CACNA1A-219ENST00000635917 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-219ENST00000635917 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-219ENST00000635917 SCAF11Q99590 1463 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-219ENST00000635917 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
CACNA1A-219ENST00000635917 PIK3C2GO75747 1445 aa17.34■□□□□ 0.37
CACNA1A-219ENST00000635917 SETBP1Q9Y6X0 1596 aa17.34■□□□□ 0.37
CACNA1A-219ENST00000635917 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-219ENST00000635917 NEXMIFQ5QGS0 1516 aa17.34■□□□□ 0.37
CACNA1A-219ENST00000635917 DISP3Q9P2K9 1392 aa17.34■□□□□ 0.37
CACNA1A-219ENST00000635917 RPGRIP1LQ68CZ1 1315 aa17.33■□□□□ 0.36
CACNA1A-219ENST00000635917 TMEM131LA2VDJ0 1609 aa17.33■□□□□ 0.36
CACNA1A-219ENST00000635917 ERVK-7P63135 1459 aa17.32■□□□□ 0.36
CACNA1A-219ENST00000635917 IDI1Q13907 227 aa17.31■□□□□ 0.36
CACNA1A-219ENST00000635917 SLC52A1Q9NWF4 448 aa17.31■□□□□ 0.36
CACNA1A-219ENST00000635917 MYO3AQ8NEV4 1616 aa17.31■□□□□ 0.36
CACNA1A-219ENST00000635917 CFAP70Q5T0N1 1121 aa17.31■□□□□ 0.36
CACNA1A-219ENST00000635917 ADGRB1O14514 1584 aa17.3■□□□□ 0.36
CACNA1A-219ENST00000635917 SPATA31D1Q6ZQQ2 1576 aa17.29■□□□□ 0.36
CACNA1A-219ENST00000635917 CCDC184Q52MB2 194 aa17.28■□□□□ 0.36
CACNA1A-219ENST00000635917 ZFYVE9O95405 1425 aa17.28■□□□□ 0.36
CACNA1A-219ENST00000635917 C14orf93Q9H972 538 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-219ENST00000635917 CHGAP10645 457 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-219ENST00000635917 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-219ENST00000635917 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
CACNA1A-219ENST00000635917 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-219ENST00000635917 TMF1P82094 1093 aa17.26■□□□□ 0.35
CACNA1A-219ENST00000635917 EIF3AQ14152 1382 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-219ENST00000635917 MYOM1P52179 1685 aa17.24■□□□□ 0.35
CACNA1A-219ENST00000635917 SBNO2Q9Y2G9 1366 aa17.23■□□□□ 0.35
CACNA1A-219ENST00000635917 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
CACNA1A-219ENST00000635917 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-219ENST00000635917 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.34
CACNA1A-219ENST00000635917 KDM5AP29375 1690 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-219ENST00000635917 ARHGEF28Q8N1W1 1705 aaKnown RBP17.19■□□□□ 0.34
CACNA1A-219ENST00000635917 ASXL1Q8IXJ9 1541 aa17.18■□□□□ 0.34
CACNA1A-219ENST00000635917 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
CACNA1A-219ENST00000635917 A2ML1A8K2U0 1454 aa17.17■□□□□ 0.34
CACNA1A-219ENST00000635917 MLECQ14165 292 aa17.17■□□□□ 0.34
CACNA1A-219ENST00000635917 QRICH2Q9H0J4 1663 aa17.17■□□□□ 0.34
CACNA1A-219ENST00000635917 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
CACNA1A-219ENST00000635917 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
CACNA1A-219ENST00000635917 SLC24A1O60721 1099 aa17.15■□□□□ 0.34
CACNA1A-219ENST00000635917 CDCA8Q53HL2 280 aa17.14■□□□□ 0.34
CACNA1A-219ENST00000635917 PANK3Q9H999 370 aa17.14■□□□□ 0.34
CACNA1A-219ENST00000635917 RALBP1Q15311 655 aa17.14■□□□□ 0.33
CACNA1A-219ENST00000635917 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-219ENST00000635917 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
CACNA1A-219ENST00000635917 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-219ENST00000635917 CENPJQ9HC77 1338 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-219ENST00000635917 ALKQ9UM73 1620 aa17.11■□□□□ 0.33
CACNA1A-219ENST00000635917 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-219ENST00000635917 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
CACNA1A-219ENST00000635917 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-219ENST00000635917 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-219ENST00000635917 UBR1Q8IWV7 1749 aa17.08■□□□□ 0.33
CACNA1A-219ENST00000635917 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
CACNA1A-219ENST00000635917 PNISRQ8TF01 805 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-219ENST00000635917 PTPRMP28827 1452 aa17.07■□□□□ 0.32
CACNA1A-219ENST00000635917 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
CACNA1A-219ENST00000635917 HNRNPUQ00839 825 aaKnown RBP eCLIP17.07■□□□□ 0.32
CACNA1A-219ENST00000635917 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-219ENST00000635917 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
CACNA1A-219ENST00000635917 LRPPRCP42704 1394 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-219ENST00000635917 NPC1L1Q9UHC9 1359 aa17.06■□□□□ 0.32
CACNA1A-219ENST00000635917 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
CACNA1A-219ENST00000635917 C3P01024 1663 aa17.06■□□□□ 0.32
CACNA1A-219ENST00000635917 TNRQ92752 1358 aa17.06■□□□□ 0.32
CACNA1A-219ENST00000635917 CNGB1Q14028 1251 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-219ENST00000635917 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-219ENST00000635917 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
CACNA1A-219ENST00000635917 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-219ENST00000635917 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-219ENST00000635917 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
CACNA1A-219ENST00000635917 PUS7Q96PZ0 661 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-219ENST00000635917 DNAJC5Q9H3Z4 198 aa17.03■□□□□ 0.32
CACNA1A-219ENST00000635917 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
CACNA1A-219ENST00000635917 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-219ENST00000635917 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
CACNA1A-219ENST00000635917 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
CACNA1A-219ENST00000635917 NLRP1Q9C000 1473 aa17.01■□□□□ 0.31
CACNA1A-219ENST00000635917 DLC1Q96QB1 1528 aa17■□□□□ 0.31
CACNA1A-219ENST00000635917 CARD14Q9BXL6 1004 aa17■□□□□ 0.31
CACNA1A-219ENST00000635917 KNSTRNQ9Y448 316 aa17■□□□□ 0.31
CACNA1A-219ENST00000635917 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-219ENST00000635917 TMEM2Q9UHN6 1383 aa16.98■□□□□ 0.31
CACNA1A-219ENST00000635917 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
CACNA1A-219ENST00000635917 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
CACNA1A-219ENST00000635917 EVC2Q86UK5 1308 aa16.96■□□□□ 0.31
CACNA1A-219ENST00000635917 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.31
CACNA1A-219ENST00000635917 ABCC11Q96J66 1382 aa16.95■□□□□ 0.3
CACNA1A-219ENST00000635917 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms