RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 KDM5AP29375 1690 aaKnown RBP28.22■■■□□ 2.11
CLN8-208ENST00000635751 NBPF8Q3BBV2 869 aa28.2■■■□□ 2.11
CLN8-208ENST00000635751 RPGRIP1LQ68CZ1 1315 aa28.19■■■□□ 2.1
CLN8-208ENST00000635751 NEXMIFQ5QGS0 1516 aa28.18■■■□□ 2.1
CLN8-208ENST00000635751 CEP170BQ9Y4F5 1589 aaPredicted RBP28.16■■■□□ 2.1
CLN8-208ENST00000635751 NUTM2DQ5VT03 806 aaPredicted RBP28.15■■■□□ 2.1
CLN8-208ENST00000635751 STAC3Q96MF2 364 aa28.15■■■□□ 2.1
CLN8-208ENST00000635751 YTHDC1Q96MU7 727 aaKnown RBP28.15■■■□□ 2.1
CLN8-208ENST00000635751 UHRF1BP1Q6BDS2 1440 aa28.15■■■□□ 2.1
CLN8-208ENST00000635751 ZNF142P52746 1687 aaPredicted RBP28.14■■■□□ 2.09
CLN8-208ENST00000635751 PRAG1Q86YV5 1406 aa28.14■■■□□ 2.09
CLN8-208ENST00000635751 MYOM2P54296 1465 aa28.12■■■□□ 2.09
CLN8-208ENST00000635751 ADGRF5Q8IZF2 1346 aa28.12■■■□□ 2.09
CLN8-208ENST00000635751 RIMS2Q9UQ26 1411 aa28.1■■■□□ 2.09
CLN8-208ENST00000635751 VGFO15240 615 aaPredicted RBP28.09■■■□□ 2.09
CLN8-208ENST00000635751 THEMISQ8N1K5 641 aaPredicted RBP28.08■■■□□ 2.09
CLN8-208ENST00000635751 TRPM1Q7Z4N2 1603 aa28.08■■■□□ 2.09
CLN8-208ENST00000635751 TMEM2Q9UHN6 1383 aa28.08■■■□□ 2.09
CLN8-208ENST00000635751 ZFYVE9O95405 1425 aa28.07■■■□□ 2.08
CLN8-208ENST00000635751 NRXN1Q9ULB1 1477 aa28.06■■■□□ 2.08
CLN8-208ENST00000635751 GTF3C3Q9Y5Q9 886 aa28.06■■■□□ 2.08
CLN8-208ENST00000635751 HDGFP51858 240 aaKnown RBP28.03■■■□□ 2.08
CLN8-208ENST00000635751 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
CLN8-208ENST00000635751 SENP3Q9H4L4 574 aaPredicted RBP28.03■■■□□ 2.08
CLN8-208ENST00000635751 SLIT1O75093 1534 aa28.03■■■□□ 2.08
CLN8-208ENST00000635751 RALGAPBQ86X10 1494 aa28.01■■■□□ 2.08
CLN8-208ENST00000635751 PIK3C2GO75747 1445 aa28.01■■■□□ 2.07
CLN8-208ENST00000635751 ARHGAP23Q9P227 1491 aa28.01■■■□□ 2.07
CLN8-208ENST00000635751 KIAA1210Q9ULL0 1709 aa28■■■□□ 2.07
CLN8-208ENST00000635751 LTKP29376 864 aa27.99■■■□□ 2.07
CLN8-208ENST00000635751 NBPF1Q3BBV0 1214 aa27.99■■■□□ 2.07
CLN8-208ENST00000635751 CFAP70Q5T0N1 1121 aa27.99■■■□□ 2.07
CLN8-208ENST00000635751 TXNDC2Q86VQ3 553 aa27.99■■■□□ 2.07
CLN8-208ENST00000635751 EID1Q9Y6B2 187 aa27.97■■■□□ 2.07
CLN8-208ENST00000635751 ROCK2O75116 1388 aaKnown RBP27.97■■■□□ 2.07
CLN8-208ENST00000635751 C14orf93Q9H972 538 aaKnown RBP27.95■■■□□ 2.06
CLN8-208ENST00000635751 CARD11Q9BXL7 1154 aa27.93■■■□□ 2.06
CLN8-208ENST00000635751 IQGAP1P46940 1657 aa27.91■■■□□ 2.06
CLN8-208ENST00000635751 LAMC1P11047 1609 aa27.91■■■□□ 2.06
CLN8-208ENST00000635751 NRXN3Q9Y4C0 1643 aa27.91■■■□□ 2.06
CLN8-208ENST00000635751 SCAF11Q99590 1463 aaKnown RBP27.91■■■□□ 2.06
CLN8-208ENST00000635751 BCANQ96GW7 911 aa27.9■■■□□ 2.06
CLN8-208ENST00000635751 ALKQ9UM73 1620 aa27.9■■■□□ 2.06
CLN8-208ENST00000635751 GPRASP1Q5JY77 1395 aa27.9■■■□□ 2.06
CLN8-208ENST00000635751 ANKLE2Q86XL3 938 aa27.89■■■□□ 2.06
CLN8-208ENST00000635751 PLEKHG1Q9ULL1 1385 aa27.88■■■□□ 2.05
CLN8-208ENST00000635751 SETBP1Q9Y6X0 1596 aa27.88■■■□□ 2.05
CLN8-208ENST00000635751 LMTK3Q96Q04 1460 aa27.87■■■□□ 2.05
CLN8-208ENST00000635751 POLR1AO95602 1720 aaPredicted RBP27.87■■■□□ 2.05
CLN8-208ENST00000635751 SETD1AO15047 1707 aaKnown RBP27.86■■■□□ 2.05
CLN8-208ENST00000635751 TMEM132EQ6IEE7 984 aa27.86■■■□□ 2.05
CLN8-208ENST00000635751 HSPA2P54652 639 aa27.85■■■□□ 2.05
CLN8-208ENST00000635751 EIF4G2P78344 907 aaKnown RBP eCLIP27.84■■■□□ 2.05
CLN8-208ENST00000635751 HIRIP3Q9BW71 556 aaPredicted RBP27.84■■■□□ 2.05
CLN8-208ENST00000635751 ADGRB1O14514 1584 aa27.84■■■□□ 2.05
CLN8-208ENST00000635751 HSPA5P11021 654 aaKnown RBP27.82■■■□□ 2.04
CLN8-208ENST00000635751 USP47Q96K76 1375 aa27.82■■■□□ 2.04
CLN8-208ENST00000635751 ASXL1Q8IXJ9 1541 aa27.81■■■□□ 2.04
CLN8-208ENST00000635751 NCKAP5LQ9HCH0 1330 aa27.81■■■□□ 2.04
CLN8-208ENST00000635751 ADAMTS13Q76LX8 1427 aa27.8■■■□□ 2.04
CLN8-208ENST00000635751 DDX10Q13206 875 aaKnown RBP27.8■■■□□ 2.04
CLN8-208ENST00000635751 SLC26A8Q96RN1 970 aa27.79■■■□□ 2.04
CLN8-208ENST00000635751 MED14O60244 1454 aa27.76■■■□□ 2.03
CLN8-208ENST00000635751 METP08581 1390 aa27.75■■■□□ 2.03
CLN8-208ENST00000635751 TRAK1Q9UPV9 953 aa27.74■■■□□ 2.03
CLN8-208ENST00000635751 NPHP4O75161 1426 aaPredicted RBP27.74■■■□□ 2.03
CLN8-208ENST00000635751 ST20-MTHFSA0A0A6YYL1 179 aa27.73■■■□□ 2.03
CLN8-208ENST00000635751 STK26Q9P289 416 aa27.73■■■□□ 2.03
CLN8-208ENST00000635751 TBX22Q9Y458 520 aa27.73■■■□□ 2.03
CLN8-208ENST00000635751 YTHDC2Q9H6S0 1430 aaKnown RBP27.72■■■□□ 2.03
CLN8-208ENST00000635751 DIP2AQ14689 1571 aa27.72■■■□□ 2.03
CLN8-208ENST00000635751 STRCQ7RTU9 1775 aa27.72■■■□□ 2.03
CLN8-208ENST00000635751 ARHGEF28Q8N1W1 1705 aaKnown RBP27.69■■■□□ 2.02
CLN8-208ENST00000635751 EIF3AQ14152 1382 aaKnown RBP27.67■■■□□ 2.02
CLN8-208ENST00000635751 LRPPRCP42704 1394 aaKnown RBP27.66■■■□□ 2.02
CLN8-208ENST00000635751 CHD2O14647 1828 aaKnown RBP27.64■■■□□ 2.01
CLN8-208ENST00000635751 KNDC1Q76NI1 1749 aa27.63■■■□□ 2.01
CLN8-208ENST00000635751 PTPRUQ92729 1446 aa27.63■■■□□ 2.01
CLN8-208ENST00000635751 ABCC11Q96J66 1382 aa27.62■■■□□ 2.01
CLN8-208ENST00000635751 QRICH2Q9H0J4 1663 aa27.61■■■□□ 2.01
CLN8-208ENST00000635751 CENPJQ9HC77 1338 aaPredicted RBP27.6■■■□□ 2.01
CLN8-208ENST00000635751 TESK2Q96S53 571 aa27.6■■■□□ 2.01
CLN8-208ENST00000635751 AMOTL2Q9Y2J4 779 aa27.6■■■□□ 2.01
CLN8-208ENST00000635751 PIK3R4Q99570 1358 aa27.59■■■□□ 2.01
CLN8-208ENST00000635751 DLC1Q96QB1 1528 aa27.59■■■□□ 2.01
CLN8-208ENST00000635751 C11orf95C9JLR9 678 aaPredicted RBP27.57■■■□□ 2
CLN8-208ENST00000635751 ANP32CO43423 234 aa27.57■■■□□ 2
CLN8-208ENST00000635751 PRAM1Q96QH2 718 aa27.57■■■□□ 2
CLN8-208ENST00000635751 CCER2I3L3R5 266 aa27.57■■■□□ 2
CLN8-208ENST00000635751 TECPR2O15040 1411 aa27.57■■■□□ 2
CLN8-208ENST00000635751 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
CLN8-208ENST00000635751 POGKQ9P215 609 aa27.56■■■□□ 2
CLN8-208ENST00000635751 XRN1Q8IZH2 1706 aaKnown RBP27.56■■■□□ 2
CLN8-208ENST00000635751 CPS1P31327 1500 aa27.56■■■□□ 2
CLN8-208ENST00000635751 WAPLQ7Z5K2 1190 aa27.55■■■□□ 2
CLN8-208ENST00000635751 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
CLN8-208ENST00000635751 ROBO2Q9HCK4 1378 aa27.53■■■□□ 2
CLN8-208ENST00000635751 PLEKHH1Q9ULM0 1364 aa27.53■■■□□ 2
CLN8-208ENST00000635751 SIRT1Q96EB6 747 aa27.52■■■□□ 2
CLN8-208ENST00000635751 KCNA6P17658 529 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms