RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 NEFHP12036 1026 aa21.27■■□□□ 1
CACNA1A-215ENST00000635727 TTC5Q8N0Z6 440 aa21.26■□□□□ 0.99
CACNA1A-215ENST00000635727 ANKRD20A12PQ8NF67 263 aa21.26■□□□□ 0.99
CACNA1A-215ENST00000635727 ATP2B2Q01814 1243 aa21.25■□□□□ 0.99
CACNA1A-215ENST00000635727 BRPF1P55201 1214 aaPredicted RBP21.25■□□□□ 0.99
CACNA1A-215ENST00000635727 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
CACNA1A-215ENST00000635727 AIMP1Q12904 312 aaKnown RBP21.24■□□□□ 0.99
CACNA1A-215ENST00000635727 WWC2Q6AWC2 1192 aa21.24■□□□□ 0.99
CACNA1A-215ENST00000635727 TRAK1Q9UPV9 953 aa21.24■□□□□ 0.99
CACNA1A-215ENST00000635727 VPS37CA5D8V6 355 aaPredicted RBP21.24■□□□□ 0.99
CACNA1A-215ENST00000635727 PKD2Q13563 968 aa21.23■□□□□ 0.99
CACNA1A-215ENST00000635727 CHMP4BP1P59074 171 aa21.23■□□□□ 0.99
CACNA1A-215ENST00000635727 OFD1O75665 1012 aa21.22■□□□□ 0.99
CACNA1A-215ENST00000635727 CENPJQ9HC77 1338 aaPredicted RBP21.21■□□□□ 0.99
CACNA1A-215ENST00000635727 TEX35Q5T0J7 233 aa21.21■□□□□ 0.99
CACNA1A-215ENST00000635727 TRDNQ13061 729 aa21.2■□□□□ 0.98
CACNA1A-215ENST00000635727 ATP2B1P20020 1258 aa21.2■□□□□ 0.98
CACNA1A-215ENST00000635727 NEUROD6Q96NK8 337 aa21.19■□□□□ 0.98
CACNA1A-215ENST00000635727 IFIT2P09913 472 aaKnown RBP21.19■□□□□ 0.98
CACNA1A-215ENST00000635727 IFT57Q9NWB7 429 aa21.19■□□□□ 0.98
CACNA1A-215ENST00000635727 NUTM2GQ5VZR2 741 aa21.18■□□□□ 0.98
CACNA1A-215ENST00000635727 HSP90AB3PQ58FF7 597 aa21.18■□□□□ 0.98
CACNA1A-215ENST00000635727 TEFQ10587 303 aa21.17■□□□□ 0.98
CACNA1A-215ENST00000635727 WASHC4Q2M389 1173 aa21.17■□□□□ 0.98
CACNA1A-215ENST00000635727 H0YHG0 523 aa21.15■□□□□ 0.98
CACNA1A-215ENST00000635727 MYCNP04198 464 aaPredicted RBP21.15■□□□□ 0.98
CACNA1A-215ENST00000635727 SASS6Q6UVJ0 657 aa21.15■□□□□ 0.98
CACNA1A-215ENST00000635727 CPLX2Q6PUV4 134 aaKnown RBP21.15■□□□□ 0.98
CACNA1A-215ENST00000635727 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.98
CACNA1A-215ENST00000635727 HOOK1Q9UJC3 728 aaKnown RBP21.14■□□□□ 0.97
CACNA1A-215ENST00000635727 TERF2IPQ9NYB0 399 aa21.14■□□□□ 0.97
CACNA1A-215ENST00000635727 HDAC5Q9UQL6 1122 aa21.14■□□□□ 0.97
CACNA1A-215ENST00000635727 ZHX3Q9H4I2 956 aa21.14■□□□□ 0.97
CACNA1A-215ENST00000635727 DCAF1Q9Y4B6 1507 aa21.13■□□□□ 0.97
CACNA1A-215ENST00000635727 DDX11L8A8MPP1 907 aa21.13■□□□□ 0.97
CACNA1A-215ENST00000635727 IPO9Q96P70 1041 aaKnown RBP21.12■□□□□ 0.97
CACNA1A-215ENST00000635727 TTC16Q8NEE8 873 aa21.12■□□□□ 0.97
CACNA1A-215ENST00000635727 MNS1Q8NEH6 495 aa21.12■□□□□ 0.97
CACNA1A-215ENST00000635727 ENOX2Q16206 610 aaKnown RBP21.12■□□□□ 0.97
CACNA1A-215ENST00000635727 MATR3P43243 847 aaKnown RBP eCLIP21.12■□□□□ 0.97
CACNA1A-215ENST00000635727 CEBPZQ03701 1054 aaKnown RBP21.11■□□□□ 0.97
CACNA1A-215ENST00000635727 KIF3BO15066 747 aa21.1■□□□□ 0.97
CACNA1A-215ENST00000635727 MAPK8IP2Q13387 824 aaPredicted RBP21.1■□□□□ 0.97
CACNA1A-215ENST00000635727 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
CACNA1A-215ENST00000635727 CCDC191Q8NCU4 936 aa21.09■□□□□ 0.97
CACNA1A-215ENST00000635727 PSME1Q06323 249 aa21.09■□□□□ 0.97
CACNA1A-215ENST00000635727 FAM161AQ3B820 660 aa21.09■□□□□ 0.97
CACNA1A-215ENST00000635727 PSMD1Q99460 953 aa21.09■□□□□ 0.97
CACNA1A-215ENST00000635727 PLCD3Q8N3E9 789 aa21.09■□□□□ 0.97
CACNA1A-215ENST00000635727 SEPT7Q16181 437 aaKnown RBP21.08■□□□□ 0.97
CACNA1A-215ENST00000635727 FMNL2Q96PY5 1086 aa21.08■□□□□ 0.97
CACNA1A-215ENST00000635727 CENPHQ9H3R5 247 aa21.08■□□□□ 0.97
CACNA1A-215ENST00000635727 LMOD3Q0VAK6 560 aa21.08■□□□□ 0.97
CACNA1A-215ENST00000635727 SYCP1Q15431 976 aa21.07■□□□□ 0.96
CACNA1A-215ENST00000635727 CCDC173Q0VFZ6 552 aa21.07■□□□□ 0.96
CACNA1A-215ENST00000635727 KRT18P05783 430 aaKnown RBP21.06■□□□□ 0.96
CACNA1A-215ENST00000635727 RBM5P52756 815 aaKnown RBP eCLIP21.06■□□□□ 0.96
CACNA1A-215ENST00000635727 CDR1P51861 262 aa21.06■□□□□ 0.96
CACNA1A-215ENST00000635727 CDK5RAP3Q96JB5 506 aa21.06■□□□□ 0.96
CACNA1A-215ENST00000635727 TSPYL1Q9H0U9 437 aa21.06■□□□□ 0.96
CACNA1A-215ENST00000635727 ATP6V1DQ9Y5K8 247 aa21.05■□□□□ 0.96
CACNA1A-215ENST00000635727 SEPT11Q9NVA2 429 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-215ENST00000635727 SAFBQ15424 915 aaKnown RBP eCLIP21.05■□□□□ 0.96
CACNA1A-215ENST00000635727 ZKSCAN1P17029 563 aaPredicted RBP21.05■□□□□ 0.96
CACNA1A-215ENST00000635727 WASHC2CQ9Y4E1 1318 aa21.05■□□□□ 0.96
CACNA1A-215ENST00000635727 HNRNPMP52272 730 aaKnown RBP eCLIP21.05■□□□□ 0.96
CACNA1A-215ENST00000635727 G3BP1Q13283 466 aaKnown RBP eCLIP21.05■□□□□ 0.96
CACNA1A-215ENST00000635727 COG6Q9Y2V7 657 aa21.04■□□□□ 0.96
CACNA1A-215ENST00000635727 OLFM4Q6UX06 510 aa21.04■□□□□ 0.96
CACNA1A-215ENST00000635727 TAX1BP1Q86VP1 789 aa21.04■□□□□ 0.96
CACNA1A-215ENST00000635727 RIC3Q7Z5B4 369 aa21.04■□□□□ 0.96
CACNA1A-215ENST00000635727 SMC2O95347 1197 aa21.03■□□□□ 0.96
CACNA1A-215ENST00000635727 RDXP35241 583 aaKnown RBP21.03■□□□□ 0.96
CACNA1A-215ENST00000635727 SMC3Q9UQE7 1217 aa21.03■□□□□ 0.96
CACNA1A-215ENST00000635727 LRRFIP1Q32MZ4 808 aaKnown RBP21.03■□□□□ 0.96
CACNA1A-215ENST00000635727 PIBF1Q8WXW3 757 aa21.03■□□□□ 0.96
CACNA1A-215ENST00000635727 COG3Q96JB2 828 aa21.03■□□□□ 0.96
CACNA1A-215ENST00000635727 SPDYE4A6NLX3 237 aa21.03■□□□□ 0.96
CACNA1A-215ENST00000635727 PDCL3Q9H2J4 239 aa21.03■□□□□ 0.96
CACNA1A-215ENST00000635727 FAM193AP78312 1265 aa21.02■□□□□ 0.96
CACNA1A-215ENST00000635727 AXDND1Q5T1B0 1012 aaPredicted RBP21.02■□□□□ 0.96
CACNA1A-215ENST00000635727 MINK1Q8N4C8 1332 aaPredicted RBP21.02■□□□□ 0.96
CACNA1A-215ENST00000635727 HSP90B2PQ58FF3 399 aa21.02■□□□□ 0.96
CACNA1A-215ENST00000635727 CHMP4AQ9BY43 222 aa21.02■□□□□ 0.95
CACNA1A-215ENST00000635727 MPNDQ8N594 471 aa21.01■□□□□ 0.95
CACNA1A-215ENST00000635727 RUFY2Q8WXA3 655 aa21.01■□□□□ 0.95
CACNA1A-215ENST00000635727 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
CACNA1A-215ENST00000635727 NEBLO76041 1014 aa21.01■□□□□ 0.95
CACNA1A-215ENST00000635727 RNF214Q8ND24 703 aa21.01■□□□□ 0.95
CACNA1A-215ENST00000635727 FAM177A1Q8N128 213 aaPredicted RBP21.01■□□□□ 0.95
CACNA1A-215ENST00000635727 DNAJC2Q99543 621 aaKnown RBP21.01■□□□□ 0.95
CACNA1A-215ENST00000635727 FKBP5Q13451 457 aaPredicted RBP21■□□□□ 0.95
CACNA1A-215ENST00000635727 NOM1Q5C9Z4 860 aaKnown RBP21■□□□□ 0.95
CACNA1A-215ENST00000635727 RALYLQ86SE5 291 aaKnown RBP21■□□□□ 0.95
CACNA1A-215ENST00000635727 GOLGA3Q08378 1498 aa21■□□□□ 0.95
CACNA1A-215ENST00000635727 BRMS1Q9HCU9 246 aa20.99■□□□□ 0.95
CACNA1A-215ENST00000635727 SPC24Q8NBT2 197 aa20.99■□□□□ 0.95
CACNA1A-215ENST00000635727 HMOX1P09601 288 aa20.99■□□□□ 0.95
CACNA1A-215ENST00000635727 NUTM2BA6NNL0 878 aaPredicted RBP20.98■□□□□ 0.95
CACNA1A-215ENST00000635727 NUTM2EB1AL46 878 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms