RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
SMARCA2-239ENST00000635388 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
SMARCA2-239ENST00000635388 RABGEF1Q9UJ41 708 aa13.57□□□□□ -0.24
SMARCA2-239ENST00000635388 DCAF1Q9Y4B6 1507 aa13.57□□□□□ -0.24
SMARCA2-239ENST00000635388 SH3D19Q5HYK7 790 aa13.54□□□□□ -0.24
SMARCA2-239ENST00000635388 VPS9D1Q9Y2B5 631 aa13.54□□□□□ -0.24
SMARCA2-239ENST00000635388 CD46P15529 392 aa13.53□□□□□ -0.24
SMARCA2-239ENST00000635388 SEPT9Q9UHD8 586 aaPredicted RBP13.5□□□□□ -0.25
SMARCA2-239ENST00000635388 BHMG1C9JSJ3 638 aaPredicted RBP13.48□□□□□ -0.25
SMARCA2-239ENST00000635388 MYSM1Q5VVJ2 828 aa13.47□□□□□ -0.25
SMARCA2-239ENST00000635388 SULF1Q8IWU6 871 aa13.47□□□□□ -0.25
SMARCA2-239ENST00000635388 DDX11L8A8MPP1 907 aa13.46□□□□□ -0.25
SMARCA2-239ENST00000635388 TK2O00142 265 aa13.46□□□□□ -0.25
SMARCA2-239ENST00000635388 SKIV2LQ15477 1246 aaKnown RBP13.46□□□□□ -0.25
SMARCA2-239ENST00000635388 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.25
SMARCA2-239ENST00000635388 FAM98CQ17RN3 349 aaKnown RBP13.45□□□□□ -0.26
SMARCA2-239ENST00000635388 SWT1Q5T5J6 900 aaKnown RBP13.45□□□□□ -0.26
SMARCA2-239ENST00000635388 TBC1D2Q9BYX2 928 aa13.45□□□□□ -0.26
SMARCA2-239ENST00000635388 ERICH6Q7L0X2 663 aa13.44□□□□□ -0.26
SMARCA2-239ENST00000635388 PCMTD1Q96MG8 357 aaPredicted RBP13.44□□□□□ -0.26
SMARCA2-239ENST00000635388 BICRAQ9NZM4 1560 aa13.44□□□□□ -0.26
SMARCA2-239ENST00000635388 LSM11P83369 360 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCA2-239ENST00000635388 SPIRE2Q8WWL2 714 aa13.43□□□□□ -0.26
SMARCA2-239ENST00000635388 LAPTM4BQ86VI4 370 aa13.42□□□□□ -0.26
SMARCA2-239ENST00000635388 SLC10A3P09131 477 aa13.41□□□□□ -0.26
SMARCA2-239ENST00000635388 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
SMARCA2-239ENST00000635388 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMARCA2-239ENST00000635388 SCRIBQ14160 1630 aa13.41□□□□□ -0.26
SMARCA2-239ENST00000635388 HRO43593 1189 aa13.4□□□□□ -0.26
SMARCA2-239ENST00000635388 ADGRD1Q6QNK2 874 aa13.4□□□□□ -0.26
SMARCA2-239ENST00000635388 PROCA1Q8NCQ7 364 aaPredicted RBP13.4□□□□□ -0.26
SMARCA2-239ENST00000635388 NBPF3Q9H094 633 aa13.4□□□□□ -0.26
SMARCA2-239ENST00000635388 CLK2P49760 499 aaKnown RBP13.39□□□□□ -0.27
SMARCA2-239ENST00000635388 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
SMARCA2-239ENST00000635388 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
SMARCA2-239ENST00000635388 LIMD1Q9UGP4 676 aa13.38□□□□□ -0.27
SMARCA2-239ENST00000635388 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
SMARCA2-239ENST00000635388 RDH13Q8NBN7 331 aa13.37□□□□□ -0.27
SMARCA2-239ENST00000635388 GCGRP47871 477 aa13.35□□□□□ -0.27
SMARCA2-239ENST00000635388 FBXO31Q5XUX0 539 aaPredicted RBP13.35□□□□□ -0.27
SMARCA2-239ENST00000635388 ZFRQ96KR1 1074 aaKnown RBP13.35□□□□□ -0.27
SMARCA2-239ENST00000635388 MOXD2PA6NHM9 499 aa13.33□□□□□ -0.28
SMARCA2-239ENST00000635388 SPTLC1O15269 473 aa13.33□□□□□ -0.28
SMARCA2-239ENST00000635388 RSBN1LQ6PCB5 846 aaPredicted RBP13.33□□□□□ -0.28
SMARCA2-239ENST00000635388 NUTM1Q86Y26 1132 aa13.33□□□□□ -0.28
SMARCA2-239ENST00000635388 TUSC1Q2TAM9 212 aa13.32□□□□□ -0.28
SMARCA2-239ENST00000635388 RIC3Q7Z5B4 369 aa13.32□□□□□ -0.28
SMARCA2-239ENST00000635388 KDM4AO75164 1064 aa13.31□□□□□ -0.28
SMARCA2-239ENST00000635388 MRPL50Q8N5N7 158 aaKnown RBP13.31□□□□□ -0.28
SMARCA2-239ENST00000635388 GJA5P36382 358 aa13.3□□□□□ -0.28
SMARCA2-239ENST00000635388 SLF2Q8IX21 1173 aa13.3□□□□□ -0.28
SMARCA2-239ENST00000635388 KRTAP3-3Q9BYR6 98 aa13.3□□□□□ -0.28
SMARCA2-239ENST00000635388 KRTAP3-2Q9BYR7 98 aa13.3□□□□□ -0.28
SMARCA2-239ENST00000635388 HOXA2O43364 376 aa13.29□□□□□ -0.28
SMARCA2-239ENST00000635388 NDUFV2P19404 249 aa13.29□□□□□ -0.28
SMARCA2-239ENST00000635388 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
SMARCA2-239ENST00000635388 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
SMARCA2-239ENST00000635388 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
SMARCA2-239ENST00000635388 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
SMARCA2-239ENST00000635388 USP46P62068 366 aa13.27□□□□□ -0.29
SMARCA2-239ENST00000635388 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
SMARCA2-239ENST00000635388 CFHP08603 1231 aa13.25□□□□□ -0.29
SMARCA2-239ENST00000635388 HLA-CQ95604 372 aa13.25□□□□□ -0.29
SMARCA2-239ENST00000635388 PCDHB15Q9Y5E8 787 aa13.25□□□□□ -0.29
SMARCA2-239ENST00000635388 RFC5P40937 340 aa13.24□□□□□ -0.29
SMARCA2-239ENST00000635388 FLIIQ13045 1269 aa13.24□□□□□ -0.29
SMARCA2-239ENST00000635388 LILRB3O75022 631 aa13.23□□□□□ -0.29
SMARCA2-239ENST00000635388 SLC4A3P48751 1232 aa13.23□□□□□ -0.29
SMARCA2-239ENST00000635388 MCM6Q14566 821 aa13.23□□□□□ -0.29
SMARCA2-239ENST00000635388 QPCTQ16769 361 aa13.23□□□□□ -0.29
SMARCA2-239ENST00000635388 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
SMARCA2-239ENST00000635388 RNF40O75150 1001 aa13.22□□□□□ -0.29
SMARCA2-239ENST00000635388 GUCA2AQ02747 115 aa13.22□□□□□ -0.29
SMARCA2-239ENST00000635388 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-239ENST00000635388 PCDHGC3Q9UN70 934 aa13.22□□□□□ -0.29
SMARCA2-239ENST00000635388 FUT2Q10981 343 aa13.21□□□□□ -0.29
SMARCA2-239ENST00000635388 FDX1P10109 184 aa13.2□□□□□ -0.3
SMARCA2-239ENST00000635388 CSPP1Q1MSJ5 1256 aa13.2□□□□□ -0.3
SMARCA2-239ENST00000635388 ATP1B4Q9UN42 357 aaPredicted RBP13.2□□□□□ -0.3
SMARCA2-239ENST00000635388 SOWAHBA6NEL2 793 aa13.19□□□□□ -0.3
SMARCA2-239ENST00000635388 ANKK1Q8NFD2 765 aa13.19□□□□□ -0.3
SMARCA2-239ENST00000635388 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
SMARCA2-239ENST00000635388 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
SMARCA2-239ENST00000635388 BCAMP50895 628 aa13.17□□□□□ -0.3
SMARCA2-239ENST00000635388 ZMYND15Q9H091 742 aa13.17□□□□□ -0.3
SMARCA2-239ENST00000635388 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
SMARCA2-239ENST00000635388 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
SMARCA2-239ENST00000635388 RTL5Q5HYW3 569 aaPredicted RBP13.16□□□□□ -0.3
SMARCA2-239ENST00000635388 HRCP23327 699 aa13.15□□□□□ -0.3
SMARCA2-239ENST00000635388 BANK1Q8NDB2 785 aa13.15□□□□□ -0.3
SMARCA2-239ENST00000635388 NECTIN2Q92692 538 aa13.15□□□□□ -0.3
SMARCA2-239ENST00000635388 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
SMARCA2-239ENST00000635388 WNT2BQ93097 391 aa13.14□□□□□ -0.31
SMARCA2-239ENST00000635388 ZBTB3Q9H5J0 574 aa13.14□□□□□ -0.31
SMARCA2-239ENST00000635388 SPDYE5A6NIY4 337 aa13.13□□□□□ -0.31
SMARCA2-239ENST00000635388 GOLGA8CPA6NN73 597 aa13.13□□□□□ -0.31
SMARCA2-239ENST00000635388 TMEM259Q4ZIN3 620 aa13.13□□□□□ -0.31
SMARCA2-239ENST00000635388 HPS5Q9UPZ3 1129 aa13.13□□□□□ -0.31
SMARCA2-239ENST00000635388 MORN1Q5T089 497 aa13.12□□□□□ -0.31
SMARCA2-239ENST00000635388 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms