RNA–Protein interactions for RNA: ENST00000635164.1

NRXN1-239, Transcript of neurexin 1, humanhuman

TSL 5

Gene NRXN1, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-239ENST00000635164 SLC12A5Q9H2X9 1139 aa9.54□□□□□ -0.88
NRXN1-239ENST00000635164 ERCC6Q03468 1493 aa9.54□□□□□ -0.88
NRXN1-239ENST00000635164 KIAA0586Q9BVV6 1533 aa9.53□□□□□ -0.88
NRXN1-239ENST00000635164 SAMD9Q5K651 1589 aa9.53□□□□□ -0.88
NRXN1-239ENST00000635164 CARMIL2Q6F5E8 1435 aa9.53□□□□□ -0.88
NRXN1-239ENST00000635164 ERBINQ96RT1 1412 aa9.53□□□□□ -0.88
NRXN1-239ENST00000635164 GGT6Q6P531 493 aa9.53□□□□□ -0.88
NRXN1-239ENST00000635164 ITPRIPQ8IWB1 547 aa9.53□□□□□ -0.88
NRXN1-239ENST00000635164 APBB1O00213 710 aa9.52□□□□□ -0.89
NRXN1-239ENST00000635164 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
NRXN1-239ENST00000635164 TCP11L2Q8N4U5 519 aa9.52□□□□□ -0.89
NRXN1-239ENST00000635164 ARID3AQ99856 593 aa9.51□□□□□ -0.89
NRXN1-239ENST00000635164 E9PSI1 815 aa9.51□□□□□ -0.89
NRXN1-239ENST00000635164 RLBP1P12271 317 aa9.51□□□□□ -0.89
NRXN1-239ENST00000635164 AMER1Q5JTC6 1135 aaPredicted RBP9.51□□□□□ -0.89
NRXN1-239ENST00000635164 PDZRN3Q9UPQ7 1066 aa9.51□□□□□ -0.89
NRXN1-239ENST00000635164 WDR62O43379 1518 aa9.51□□□□□ -0.89
NRXN1-239ENST00000635164 SMC4Q9NTJ3 1288 aa9.5□□□□□ -0.89
NRXN1-239ENST00000635164 PCDHB15Q9Y5E8 787 aa9.5□□□□□ -0.89
NRXN1-239ENST00000635164 KDM2BQ8NHM5 1336 aa9.5□□□□□ -0.89
NRXN1-239ENST00000635164 RALGAPBQ86X10 1494 aa9.5□□□□□ -0.89
NRXN1-239ENST00000635164 MTHFSP49914 203 aa9.5□□□□□ -0.89
NRXN1-239ENST00000635164 PANK2Q9BZ23 570 aa9.5□□□□□ -0.89
NRXN1-239ENST00000635164 PTPRGP23470 1445 aa9.5□□□□□ -0.89
NRXN1-239ENST00000635164 NCLP19338 710 aaKnown RBP9.49□□□□□ -0.89
NRXN1-239ENST00000635164 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
NRXN1-239ENST00000635164 MYCNP04198 464 aaPredicted RBP9.49□□□□□ -0.89
NRXN1-239ENST00000635164 GCC2Q8IWJ2 1684 aa9.49□□□□□ -0.89
NRXN1-239ENST00000635164 DISP1Q96F81 1524 aa9.48□□□□□ -0.89
NRXN1-239ENST00000635164 PLEKHH2Q8IVE3 1493 aa9.48□□□□□ -0.89
NRXN1-239ENST00000635164 WASHC2CQ9Y4E1 1318 aa9.48□□□□□ -0.89
NRXN1-239ENST00000635164 FBLN1P23142 703 aa9.48□□□□□ -0.89
NRXN1-239ENST00000635164 LNPKQ9C0E8 428 aa9.48□□□□□ -0.89
NRXN1-239ENST00000635164 KIF14Q15058 1648 aa9.48□□□□□ -0.89
NRXN1-239ENST00000635164 PRAG1Q86YV5 1406 aa9.48□□□□□ -0.89
NRXN1-239ENST00000635164 SLC24A1O60721 1099 aa9.48□□□□□ -0.89
NRXN1-239ENST00000635164 SPAG9O60271 1321 aaKnown RBP9.47□□□□□ -0.89
NRXN1-239ENST00000635164 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
NRXN1-239ENST00000635164 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
NRXN1-239ENST00000635164 TBC1D2Q9BYX2 928 aa9.47□□□□□ -0.89
NRXN1-239ENST00000635164 DNMT1P26358 1616 aaKnown RBP9.47□□□□□ -0.89
NRXN1-239ENST00000635164 KDM5CP41229 1560 aa9.46□□□□□ -0.89
NRXN1-239ENST00000635164 GOLGA6L3A6NEY3 463 aa9.46□□□□□ -0.89
NRXN1-239ENST00000635164 SRPK2P78362 688 aaKnown RBP9.46□□□□□ -0.89
NRXN1-239ENST00000635164 GGNBP2Q9H3C7 697 aa9.46□□□□□ -0.89
NRXN1-239ENST00000635164 CGNL1Q0VF96 1302 aa9.46□□□□□ -0.89
NRXN1-239ENST00000635164 RWDD1Q9H446 243 aaPredicted RBP9.46□□□□□ -0.9
NRXN1-239ENST00000635164 ADGRF5Q8IZF2 1346 aa9.45□□□□□ -0.9
NRXN1-239ENST00000635164 SOX12O15370 315 aa9.45□□□□□ -0.9
NRXN1-239ENST00000635164 HSP90AB1P08238 724 aaKnown RBP9.45□□□□□ -0.9
NRXN1-239ENST00000635164 EFCAB2Q5VUJ9 269 aa9.45□□□□□ -0.9
NRXN1-239ENST00000635164 FOXD4L5Q5VV16 416 aaPredicted RBP9.45□□□□□ -0.9
NRXN1-239ENST00000635164 FOXD4L4Q8WXT5 416 aaPredicted RBP9.45□□□□□ -0.9
NRXN1-239ENST00000635164 CABP2Q9NPB3 220 aa9.45□□□□□ -0.9
NRXN1-239ENST00000635164 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
NRXN1-239ENST00000635164 MAGI1Q96QZ7 1491 aaPredicted RBP9.45□□□□□ -0.9
NRXN1-239ENST00000635164 CFAP53Q96M91 514 aa9.45□□□□□ -0.9
NRXN1-239ENST00000635164 RARSP54136 660 aaKnown RBP9.44□□□□□ -0.9
NRXN1-239ENST00000635164 EXOSC9Q06265 439 aaKnown RBP9.44□□□□□ -0.9
NRXN1-239ENST00000635164 HSCBQ8IWL3 235 aa9.44□□□□□ -0.9
NRXN1-239ENST00000635164 C22orf23Q9BZE7 217 aa9.44□□□□□ -0.9
NRXN1-239ENST00000635164 PNNQ9H307 717 aaKnown RBP9.44□□□□□ -0.9
NRXN1-239ENST00000635164 RRAGDQ9NQL2 400 aaPredicted RBP9.44□□□□□ -0.9
NRXN1-239ENST00000635164 PMFBP1Q8TBY8 1022 aa9.44□□□□□ -0.9
NRXN1-239ENST00000635164 TRIM44Q96DX7 344 aaPredicted RBP9.44□□□□□ -0.9
NRXN1-239ENST00000635164 ATP10BO94823 1461 aa9.44□□□□□ -0.9
NRXN1-239ENST00000635164 GRIN2AQ12879 1464 aa9.44□□□□□ -0.9
NRXN1-239ENST00000635164 MBD5Q9P267 1494 aa9.44□□□□□ -0.9
NRXN1-239ENST00000635164 MAPK8IP3Q9UPT6 1336 aa9.44□□□□□ -0.9
NRXN1-239ENST00000635164 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.43□□□□□ -0.9
NRXN1-239ENST00000635164 A2MP01023 1474 aa9.43□□□□□ -0.9
NRXN1-239ENST00000635164 MAGI2Q86UL8 1455 aa9.43□□□□□ -0.9
NRXN1-239ENST00000635164 PLEKHG5O94827 1062 aa9.43□□□□□ -0.9
NRXN1-239ENST00000635164 FOXD4L6Q3SYB3 417 aaPredicted RBP9.43□□□□□ -0.9
NRXN1-239ENST00000635164 FOXD4L3Q6VB84 417 aaPredicted RBP9.43□□□□□ -0.9
NRXN1-239ENST00000635164 THUMPD2Q9BTF0 503 aaKnown RBP9.43□□□□□ -0.9
NRXN1-239ENST00000635164 UHRF1BP1Q6BDS2 1440 aa9.42□□□□□ -0.9
NRXN1-239ENST00000635164 ARHGAP5Q13017 1502 aa9.42□□□□□ -0.9
NRXN1-239ENST00000635164 DZIP1LQ8IYY4 767 aaKnown RBP9.42□□□□□ -0.9
NRXN1-239ENST00000635164 RAPGEF6Q8TEU7 1601 aa9.42□□□□□ -0.9
NRXN1-239ENST00000635164 ANKRD45Q5TZF3 282 aa9.42□□□□□ -0.9
NRXN1-239ENST00000635164 TRAK2O60296 914 aa9.41□□□□□ -0.9
NRXN1-239ENST00000635164 ZKSCAN2Q63HK3 967 aa9.41□□□□□ -0.9
NRXN1-239ENST00000635164 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
NRXN1-239ENST00000635164 HMOX1P09601 288 aa9.41□□□□□ -0.9
NRXN1-239ENST00000635164 RSPH4AQ5TD94 716 aa9.41□□□□□ -0.9
NRXN1-239ENST00000635164 SAMD1Q6SPF0 538 aaPredicted RBP9.41□□□□□ -0.9
NRXN1-239ENST00000635164 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
NRXN1-239ENST00000635164 FAM135AQ9P2D6 1515 aa9.41□□□□□ -0.9
NRXN1-239ENST00000635164 NOL8Q76FK4 1167 aaKnown RBP9.41□□□□□ -0.9
NRXN1-239ENST00000635164 USP19O94966 1318 aa9.41□□□□□ -0.9
NRXN1-239ENST00000635164 KIAA0556O60303 1618 aa9.41□□□□□ -0.9
NRXN1-239ENST00000635164 XRCC6P12956 609 aaKnown RBP eCLIP9.4□□□□□ -0.9
NRXN1-239ENST00000635164 PDE3AQ14432 1141 aa9.4□□□□□ -0.9
NRXN1-239ENST00000635164 L1TD1Q5T7N2 865 aaKnown RBP9.4□□□□□ -0.9
NRXN1-239ENST00000635164 NOB1Q9ULX3 412 aaKnown RBP9.4□□□□□ -0.9
NRXN1-239ENST00000635164 NKTRP30414 1462 aaKnown RBP9.4□□□□□ -0.9
NRXN1-239ENST00000635164 MYH16Q9H6N6 1097 aa9.4□□□□□ -0.9
NRXN1-239ENST00000635164 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
NRXN1-239ENST00000635164 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms