RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 TTC5Q8N0Z6 440 aa25.82■■□□□ 1.72
SMARCA2-227ENST00000634760 NOL8Q76FK4 1167 aaKnown RBP25.82■■□□□ 1.72
SMARCA2-227ENST00000634760 MINK1Q8N4C8 1332 aaPredicted RBP25.82■■□□□ 1.72
SMARCA2-227ENST00000634760 FOXD4L1Q9NU39 408 aa25.82■■□□□ 1.72
SMARCA2-227ENST00000634760 BRD4O60885 1362 aaPredicted RBP25.82■■□□□ 1.72
SMARCA2-227ENST00000634760 DDX58O95786 925 aaKnown RBP25.82■■□□□ 1.72
SMARCA2-227ENST00000634760 TPM3P06753 285 aa25.82■■□□□ 1.72
SMARCA2-227ENST00000634760 APAF1O14727 1248 aa25.81■■□□□ 1.72
SMARCA2-227ENST00000634760 GNAI1P63096 354 aa25.81■■□□□ 1.72
SMARCA2-227ENST00000634760 EHBP1L1Q8N3D4 1523 aa25.8■■□□□ 1.72
SMARCA2-227ENST00000634760 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
SMARCA2-227ENST00000634760 TOMM22Q9NS69 142 aa25.79■■□□□ 1.72
SMARCA2-227ENST00000634760 SCAPERQ9BY12 1400 aa25.79■■□□□ 1.72
SMARCA2-227ENST00000634760 FRAT2O75474 233 aaPredicted RBP25.79■■□□□ 1.72
SMARCA2-227ENST00000634760 SYNE3Q6ZMZ3 975 aa25.79■■□□□ 1.72
SMARCA2-227ENST00000634760 GTF2E1P29083 439 aaPredicted RBP25.79■■□□□ 1.72
SMARCA2-227ENST00000634760 HSP90AB4PQ58FF6 505 aa25.79■■□□□ 1.72
SMARCA2-227ENST00000634760 COG6Q9Y2V7 657 aa25.79■■□□□ 1.72
SMARCA2-227ENST00000634760 RIPK4P57078 832 aa25.78■■□□□ 1.72
SMARCA2-227ENST00000634760 OSCARQ8IYS5 282 aa25.78■■□□□ 1.72
SMARCA2-227ENST00000634760 ZKSCAN1P17029 563 aaPredicted RBP25.77■■□□□ 1.72
SMARCA2-227ENST00000634760 AKAP17AQ02040 695 aaKnown RBP25.77■■□□□ 1.72
SMARCA2-227ENST00000634760 KIF7Q2M1P5 1343 aa25.77■■□□□ 1.72
SMARCA2-227ENST00000634760 CPLX2Q6PUV4 134 aaKnown RBP25.77■■□□□ 1.72
SMARCA2-227ENST00000634760 PLIN1O60240 522 aa25.76■■□□□ 1.71
SMARCA2-227ENST00000634760 TPM2P07951 284 aa25.76■■□□□ 1.71
SMARCA2-227ENST00000634760 DDX49Q9Y6V7 483 aaKnown RBP25.76■■□□□ 1.71
SMARCA2-227ENST00000634760 ARHGAP5Q13017 1502 aa25.75■■□□□ 1.71
SMARCA2-227ENST00000634760 PLEKHH2Q8IVE3 1493 aa25.75■■□□□ 1.71
SMARCA2-227ENST00000634760 AMOTL1Q8IY63 956 aa25.75■■□□□ 1.71
SMARCA2-227ENST00000634760 C9orf78Q9NZ63 289 aaPredicted RBP25.75■■□□□ 1.71
SMARCA2-227ENST00000634760 RNF20Q5VTR2 975 aa25.74■■□□□ 1.71
SMARCA2-227ENST00000634760 GOLGA6L19H0YKK7 550 aa25.74■■□□□ 1.71
SMARCA2-227ENST00000634760 BCL2L13Q9BXK5 485 aa25.74■■□□□ 1.71
SMARCA2-227ENST00000634760 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
SMARCA2-227ENST00000634760 NUTM2FA1L443 756 aa25.73■■□□□ 1.71
SMARCA2-227ENST00000634760 MARCH6O60337 910 aa25.73■■□□□ 1.71
SMARCA2-227ENST00000634760 IFIT2P09913 472 aaKnown RBP25.73■■□□□ 1.71
SMARCA2-227ENST00000634760 GSE1Q14687 1217 aa25.73■■□□□ 1.71
SMARCA2-227ENST00000634760 EVA1CP58658 441 aa25.73■■□□□ 1.71
SMARCA2-227ENST00000634760 INTS3Q68E01 1043 aaKnown RBP25.73■■□□□ 1.71
SMARCA2-227ENST00000634760 HFM1A2PYH4 1435 aa25.72■■□□□ 1.71
SMARCA2-227ENST00000634760 ELL2O00472 640 aaPredicted RBP25.71■■□□□ 1.71
SMARCA2-227ENST00000634760 TPM1P09493 284 aa25.71■■□□□ 1.71
SMARCA2-227ENST00000634760 TSR1Q2NL82 804 aaKnown RBP25.71■■□□□ 1.71
SMARCA2-227ENST00000634760 TPD52L1Q16890 204 aaPredicted RBP25.71■■□□□ 1.71
SMARCA2-227ENST00000634760 NOL10Q9BSC4 688 aaKnown RBP25.7■■□□□ 1.71
SMARCA2-227ENST00000634760 CHMP5Q9NZZ3 219 aa25.7■■□□□ 1.71
SMARCA2-227ENST00000634760 TRIM29Q14134 588 aa25.69■■□□□ 1.7
SMARCA2-227ENST00000634760 WASHC2AQ641Q2 1341 aa25.69■■□□□ 1.7
SMARCA2-227ENST00000634760 HECW1Q76N89 1606 aa25.68■■□□□ 1.7
SMARCA2-227ENST00000634760 ERC2O15083 957 aa25.68■■□□□ 1.7
SMARCA2-227ENST00000634760 RSPH6AQ9H0K4 717 aa25.67■■□□□ 1.7
SMARCA2-227ENST00000634760 CEP89Q96ST8 783 aa25.67■■□□□ 1.7
SMARCA2-227ENST00000634760 ANO2Q9NQ90 1003 aa25.67■■□□□ 1.7
SMARCA2-227ENST00000634760 G3BP1Q13283 466 aaKnown RBP eCLIP25.67■■□□□ 1.7
SMARCA2-227ENST00000634760 BECN2A8MW95 431 aa25.66■■□□□ 1.7
SMARCA2-227ENST00000634760 HOOK1Q9UJC3 728 aaKnown RBP25.66■■□□□ 1.7
SMARCA2-227ENST00000634760 NUCB2P80303 420 aa25.66■■□□□ 1.7
SMARCA2-227ENST00000634760 PSME1Q06323 249 aa25.65■■□□□ 1.7
SMARCA2-227ENST00000634760 CCDC47Q96A33 483 aaKnown RBP25.64■■□□□ 1.7
SMARCA2-227ENST00000634760 WWC1Q8IX03 1113 aa25.64■■□□□ 1.69
SMARCA2-227ENST00000634760 FOXD4L5Q5VV16 416 aaPredicted RBP25.64■■□□□ 1.69
SMARCA2-227ENST00000634760 FOXD4L4Q8WXT5 416 aaPredicted RBP25.64■■□□□ 1.69
SMARCA2-227ENST00000634760 EIF2S2P20042 333 aaKnown RBP25.63■■□□□ 1.69
SMARCA2-227ENST00000634760 A0A0U1RQG5 324 aaPredicted RBP25.62■■□□□ 1.69
SMARCA2-227ENST00000634760 TSPYL4Q9UJ04 414 aa25.62■■□□□ 1.69
SMARCA2-227ENST00000634760 CFTRP13569 1480 aa25.61■■□□□ 1.69
SMARCA2-227ENST00000634760 NINLQ9Y2I6 1382 aa25.61■■□□□ 1.69
SMARCA2-227ENST00000634760 FKBP5Q13451 457 aaPredicted RBP25.61■■□□□ 1.69
SMARCA2-227ENST00000634760 CREBRFQ8IUR6 639 aa25.61■■□□□ 1.69
SMARCA2-227ENST00000634760 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.698e-9■■■■■ 47.5
SMARCA2-227ENST00000634760 CCDC70Q6NSX1 233 aa25.6■■□□□ 1.69
SMARCA2-227ENST00000634760 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
SMARCA2-227ENST00000634760 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
SMARCA2-227ENST00000634760 TRDNQ13061 729 aa25.59■■□□□ 1.69
SMARCA2-227ENST00000634760 ANKRD20A12PQ8NF67 263 aa25.58■■□□□ 1.69
SMARCA2-227ENST00000634760 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
SMARCA2-227ENST00000634760 ZNF644Q9H582 1327 aaPredicted RBP25.58■■□□□ 1.68
SMARCA2-227ENST00000634760 CDC45O75419 566 aa25.57■■□□□ 1.68
SMARCA2-227ENST00000634760 VPS53Q5VIR6 699 aa25.57■■□□□ 1.68
SMARCA2-227ENST00000634760 MCTP1Q6DN14 999 aa25.57■■□□□ 1.68
SMARCA2-227ENST00000634760 KIAA1107Q9UPP5 1409 aa25.57■■□□□ 1.68
SMARCA2-227ENST00000634760 CPLX1O14810 134 aa25.56■■□□□ 1.68
SMARCA2-227ENST00000634760 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
SMARCA2-227ENST00000634760 GPS2Q13227 327 aa25.56■■□□□ 1.68
SMARCA2-227ENST00000634760 ARAP1Q96P48 1450 aa25.54■■□□□ 1.68
SMARCA2-227ENST00000634760 HMGXB3Q12766 1538 aa25.54■■□□□ 1.68
SMARCA2-227ENST00000634760 TRIM34Q9BYJ4 488 aa25.54■■□□□ 1.68
SMARCA2-227ENST00000634760 SUPT6HQ7KZ85 1726 aaKnown RBP25.54■■□□□ 1.68
SMARCA2-227ENST00000634760 ERICH2A1L162 156 aa25.54■■□□□ 1.68
SMARCA2-227ENST00000634760 SMC3Q9UQE7 1217 aa25.54■■□□□ 1.68
SMARCA2-227ENST00000634760 RAPGEF4Q8WZA2 1011 aa25.52■■□□□ 1.68
SMARCA2-227ENST00000634760 C22orf23Q9BZE7 217 aa25.52■■□□□ 1.68
SMARCA2-227ENST00000634760 GAS2L2Q8NHY3 880 aa25.52■■□□□ 1.68
SMARCA2-227ENST00000634760 CYB5RLQ6IPT4 315 aa25.52■■□□□ 1.68
SMARCA2-227ENST00000634760 C9orf84Q5VXU9 1444 aa25.52■■□□□ 1.68
SMARCA2-227ENST00000634760 PES1O00541 588 aaKnown RBP25.51■■□□□ 1.67
SMARCA2-227ENST00000634760 TNNT3P45378 269 aaPredicted RBP25.51■■□□□ 1.67
SMARCA2-227ENST00000634760 TIAM1Q13009 1591 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms