RNA–Protein interactions for RNA: ENST00000633295.1

LINC01002-225, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 492 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-225ENST00000633295 FOXD4L5Q5VV16 416 aaPredicted RBP13.41□□□□□ -0.26
LINC01002-225ENST00000633295 FOXD4L4Q8WXT5 416 aaPredicted RBP13.41□□□□□ -0.26
LINC01002-225ENST00000633295 RBM25P49756 843 aaKnown RBP13.4□□□□□ -0.26
LINC01002-225ENST00000633295 LILRB3O75022 631 aa13.39□□□□□ -0.27
LINC01002-225ENST00000633295 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
LINC01002-225ENST00000633295 SULF1Q8IWU6 871 aa13.39□□□□□ -0.27
LINC01002-225ENST00000633295 FOSBP53539 338 aa13.38□□□□□ -0.27
LINC01002-225ENST00000633295 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
LINC01002-225ENST00000633295 AP1G2O75843 785 aa13.37□□□□□ -0.27
LINC01002-225ENST00000633295 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
LINC01002-225ENST00000633295 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
LINC01002-225ENST00000633295 NDUFB9Q9Y6M9 179 aa13.37□□□□□ -0.27
LINC01002-225ENST00000633295 USP17L8P0C7I0 530 aa13.36□□□□□ -0.27
LINC01002-225ENST00000633295 PRSS12P56730 875 aa13.36□□□□□ -0.27
LINC01002-225ENST00000633295 PCDHGA4Q9Y5G9 962 aa13.36□□□□□ -0.27
LINC01002-225ENST00000633295 PRPF38BQ5VTL8 546 aaKnown RBP13.35□□□□□ -0.27
LINC01002-225ENST00000633295 AMOTL2Q9Y2J4 779 aa13.35□□□□□ -0.27
LINC01002-225ENST00000633295 KDM4FA0A1W2PPD8 638 aa13.34□□□□□ -0.27
LINC01002-225ENST00000633295 SRPK2P78362 688 aaKnown RBP13.34□□□□□ -0.27
LINC01002-225ENST00000633295 QPCTQ16769 361 aa13.34□□□□□ -0.27
LINC01002-225ENST00000633295 CFAP70Q5T0N1 1121 aa13.34□□□□□ -0.27
LINC01002-225ENST00000633295 HDGFL1Q5TGJ6 251 aa13.34□□□□□ -0.27
LINC01002-225ENST00000633295 MOXD2PA6NHM9 499 aa13.33□□□□□ -0.28
LINC01002-225ENST00000633295 E9PSI1 815 aa13.33□□□□□ -0.28
LINC01002-225ENST00000633295 SEC24BO95487 1268 aa13.33□□□□□ -0.28
LINC01002-225ENST00000633295 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
LINC01002-225ENST00000633295 ZDHHC16Q969W1 377 aa13.33□□□□□ -0.28
LINC01002-225ENST00000633295 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.32□□□□□ -0.28
LINC01002-225ENST00000633295 RCCD1A6NED2 376 aa13.32□□□□□ -0.28
LINC01002-225ENST00000633295 CSPP1Q1MSJ5 1256 aa13.32□□□□□ -0.28
LINC01002-225ENST00000633295 ADAMTS19Q8TE59 1207 aa13.32□□□□□ -0.28
LINC01002-225ENST00000633295 GJD4Q96KN9 370 aaPredicted RBP13.32□□□□□ -0.28
LINC01002-225ENST00000633295 CDCA7LQ96GN5 454 aa13.31□□□□□ -0.28
LINC01002-225ENST00000633295 ZNF428Q96B54 188 aa13.3□□□□□ -0.28
LINC01002-225ENST00000633295 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
LINC01002-225ENST00000633295 PPP1R12CQ9BZL4 782 aa13.29□□□□□ -0.28
LINC01002-225ENST00000633295 EYA1Q99502 592 aa13.28□□□□□ -0.28
LINC01002-225ENST00000633295 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
LINC01002-225ENST00000633295 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.29
LINC01002-225ENST00000633295 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.29
LINC01002-225ENST00000633295 RFX1P22670 979 aa13.27□□□□□ -0.29
LINC01002-225ENST00000633295 CCDC27Q2M243 656 aa13.27□□□□□ -0.29
LINC01002-225ENST00000633295 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
LINC01002-225ENST00000633295 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.29
LINC01002-225ENST00000633295 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.29
LINC01002-225ENST00000633295 NDUFV2P19404 249 aa13.25□□□□□ -0.29
LINC01002-225ENST00000633295 SND1Q7KZF4 910 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC01002-225ENST00000633295 ZNF454Q8N9F8 522 aa13.25□□□□□ -0.29
LINC01002-225ENST00000633295 ZBTB3Q9H5J0 574 aa13.25□□□□□ -0.29
LINC01002-225ENST00000633295 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
LINC01002-225ENST00000633295 DNAJB2P25686 324 aa13.24□□□□□ -0.29
LINC01002-225ENST00000633295 IVNS1ABPQ9Y6Y0 642 aa13.23□□□□□ -0.29
LINC01002-225ENST00000633295 GPR37L1O60883 481 aa13.22□□□□□ -0.29
LINC01002-225ENST00000633295 USP46P62068 366 aa13.22□□□□□ -0.29
LINC01002-225ENST00000633295 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
LINC01002-225ENST00000633295 CABLES1Q8TDN4 633 aa13.22□□□□□ -0.29
LINC01002-225ENST00000633295 ADAM33Q9BZ11 813 aa13.22□□□□□ -0.29
LINC01002-225ENST00000633295 PALM3A6NDB9 673 aaPredicted RBP13.21□□□□□ -0.29
LINC01002-225ENST00000633295 SOX11P35716 441 aa13.21□□□□□ -0.29
LINC01002-225ENST00000633295 ALG2Q9H553 416 aa13.21□□□□□ -0.29
LINC01002-225ENST00000633295 IGSF3O75054 1194 aa13.2□□□□□ -0.3
LINC01002-225ENST00000633295 ATG7O95352 703 aa13.2□□□□□ -0.3
LINC01002-225ENST00000633295 TMEM134Q9H6X4 195 aa13.2□□□□□ -0.3
LINC01002-225ENST00000633295 VRTNQ9H8Y1 702 aa13.2□□□□□ -0.3
LINC01002-225ENST00000633295 KDM4AO75164 1064 aa13.19□□□□□ -0.3
LINC01002-225ENST00000633295 TRIM34Q9BYJ4 488 aa13.19□□□□□ -0.3
LINC01002-225ENST00000633295 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
LINC01002-225ENST00000633295 LOC105371045A0A1W2PR82 267 aa13.18□□□□□ -0.3
LINC01002-225ENST00000633295 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
LINC01002-225ENST00000633295 VAC14Q08AM6 782 aa13.17□□□□□ -0.3
LINC01002-225ENST00000633295 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
LINC01002-225ENST00000633295 TMEM88BA6NKF7 163 aa13.16□□□□□ -0.3
LINC01002-225ENST00000633295 NBPF26B4DH59 902 aa13.16□□□□□ -0.3
LINC01002-225ENST00000633295 LMOD1P29536 600 aaPredicted RBP13.16□□□□□ -0.3
LINC01002-225ENST00000633295 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
LINC01002-225ENST00000633295 HMX1Q9NP08 348 aaPredicted RBP13.15□□□□□ -0.3
LINC01002-225ENST00000633295 GNEQ9Y223 722 aaKnown RBP13.15□□□□□ -0.3
LINC01002-225ENST00000633295 HOXA2O43364 376 aa13.14□□□□□ -0.31
LINC01002-225ENST00000633295 UCN2Q96RP3 112 aa13.14□□□□□ -0.31
LINC01002-225ENST00000633295 SHROOM4Q9ULL8 1493 aa13.13□□□□□ -0.31
LINC01002-225ENST00000633295 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
LINC01002-225ENST00000633295 FDX1P10109 184 aa13.13□□□□□ -0.31
LINC01002-225ENST00000633295 C7P10643 843 aa13.13□□□□□ -0.31
LINC01002-225ENST00000633295 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
LINC01002-225ENST00000633295 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
LINC01002-225ENST00000633295 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
LINC01002-225ENST00000633295 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
LINC01002-225ENST00000633295 CTDSPL2Q05D32 466 aa13.11□□□□□ -0.31
LINC01002-225ENST00000633295 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
LINC01002-225ENST00000633295 CARNS1A5YM72 827 aa13.1□□□□□ -0.31
LINC01002-225ENST00000633295 MAFBQ9Y5Q3 323 aaPredicted RBP13.1□□□□□ -0.31
LINC01002-225ENST00000633295 GCGRP47871 477 aa13.09□□□□□ -0.31
LINC01002-225ENST00000633295 RSPH4AQ5TD94 716 aa13.09□□□□□ -0.31
LINC01002-225ENST00000633295 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.09□□□□□ -0.31
LINC01002-225ENST00000633295 PPP1R3GB7ZBB8 358 aa13.08□□□□□ -0.32
LINC01002-225ENST00000633295 COL9A1P20849 921 aa13.08□□□□□ -0.32
LINC01002-225ENST00000633295 MTMR2Q13614 643 aa13.08□□□□□ -0.32
LINC01002-225ENST00000633295 TATDN2Q93075 761 aa13.08□□□□□ -0.32
LINC01002-225ENST00000633295 PNMA3Q9UL41 463 aa13.08□□□□□ -0.32
LINC01002-225ENST00000633295 HAX1O00165 279 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms