RNA–Protein interactions for RNA: ENST00000633295.1

LINC01002-225, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 492 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-225ENST00000633295 CHIC1Q5VXU3 224 aa27.5■■□□□ 1.99
LINC01002-225ENST00000633295 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
LINC01002-225ENST00000633295 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
LINC01002-225ENST00000633295 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
LINC01002-225ENST00000633295 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
LINC01002-225ENST00000633295 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
LINC01002-225ENST00000633295 KCNA4P22459 653 aa21.32■■□□□ 1
LINC01002-225ENST00000633295 ADRA2BP18089 450 aa21.3■■□□□ 1
LINC01002-225ENST00000633295 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
LINC01002-225ENST00000633295 FOXD1Q16676 465 aa20.72■□□□□ 0.91
LINC01002-225ENST00000633295 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
LINC01002-225ENST00000633295 SLC4A1APQ9BWU0 796 aaKnown RBP20.57■□□□□ 0.88
LINC01002-225ENST00000633295 PPP4R3CPQ6ZMV5 832 aa20.32■□□□□ 0.84
LINC01002-225ENST00000633295 NCBP3Q53F19 620 aaKnown RBP20.23■□□□□ 0.83
LINC01002-225ENST00000633295 NPM3O75607 178 aaKnown RBP19.88■□□□□ 0.77
LINC01002-225ENST00000633295 PIAS4Q8N2W9 510 aaPredicted RBP19.88■□□□□ 0.77
LINC01002-225ENST00000633295 ZBTB22O15209 634 aa19.64■□□□□ 0.73
LINC01002-225ENST00000633295 SLC24A1O60721 1099 aa19.54■□□□□ 0.72
LINC01002-225ENST00000633295 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
LINC01002-225ENST00000633295 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
LINC01002-225ENST00000633295 AMER1Q5JTC6 1135 aaPredicted RBP19.31■□□□□ 0.68
LINC01002-225ENST00000633295 FOXD4L1Q9NU39 408 aa19.31■□□□□ 0.68
LINC01002-225ENST00000633295 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
LINC01002-225ENST00000633295 RTN4Q9NQC3 1192 aaKnown RBP19.2■□□□□ 0.66
LINC01002-225ENST00000633295 RNF216Q9NWF9 866 aaPredicted RBP18.82■□□□□ 0.6
LINC01002-225ENST00000633295 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
LINC01002-225ENST00000633295 MSH5O43196 834 aa18.69■□□□□ 0.58
LINC01002-225ENST00000633295 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
LINC01002-225ENST00000633295 ATXN8OSP0DMR3 200 aa18.59■□□□□ 0.57
LINC01002-225ENST00000633295 FKBP8Q14318 412 aa18.53■□□□□ 0.56
LINC01002-225ENST00000633295 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
LINC01002-225ENST00000633295 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
LINC01002-225ENST00000633295 HOXD11P31277 338 aaPredicted RBP18.4■□□□□ 0.54
LINC01002-225ENST00000633295 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
LINC01002-225ENST00000633295 PLCB2Q00722 1185 aa17.72■□□□□ 0.43
LINC01002-225ENST00000633295 ATF5Q9Y2D1 282 aaPredicted RBP17.69■□□□□ 0.42
LINC01002-225ENST00000633295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
LINC01002-225ENST00000633295 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
LINC01002-225ENST00000633295 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
LINC01002-225ENST00000633295 FBXO3Q9UK99 471 aa17.62■□□□□ 0.41
LINC01002-225ENST00000633295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.39
LINC01002-225ENST00000633295 BCANQ96GW7 911 aa17.41■□□□□ 0.38
LINC01002-225ENST00000633295 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.37
LINC01002-225ENST00000633295 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
LINC01002-225ENST00000633295 ZNF219Q9P2Y4 722 aaPredicted RBP17.31■□□□□ 0.36
LINC01002-225ENST00000633295 SPDYE4A6NLX3 237 aa17.3■□□□□ 0.36
LINC01002-225ENST00000633295 VASPP50552 380 aaPredicted RBP17.3■□□□□ 0.36
LINC01002-225ENST00000633295 PROM2Q8N271 834 aa17.3■□□□□ 0.36
LINC01002-225ENST00000633295 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
LINC01002-225ENST00000633295 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
LINC01002-225ENST00000633295 APLP2Q06481 763 aa17.19■□□□□ 0.34
LINC01002-225ENST00000633295 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
LINC01002-225ENST00000633295 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
LINC01002-225ENST00000633295 IFNLR1Q8IU57 520 aaPredicted RBP17.12■□□□□ 0.33
LINC01002-225ENST00000633295 PRKCSHP14314 528 aaPredicted RBP17.11■□□□□ 0.33
LINC01002-225ENST00000633295 PKD2Q13563 968 aa17.07■□□□□ 0.32
LINC01002-225ENST00000633295 MKRN4PQ13434 485 aaPredicted RBP17.03■□□□□ 0.32
LINC01002-225ENST00000633295 FBLN2P98095 1184 aa16.95■□□□□ 0.3
LINC01002-225ENST00000633295 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.95■□□□□ 0.3
LINC01002-225ENST00000633295 BBXQ8WY36 941 aaPredicted RBP16.93■□□□□ 0.3
LINC01002-225ENST00000633295 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
LINC01002-225ENST00000633295 KDM2AQ9Y2K7 1162 aa16.85■□□□□ 0.29
LINC01002-225ENST00000633295 PAXIP1Q6ZW49 1069 aaPredicted RBP16.75■□□□□ 0.27
LINC01002-225ENST00000633295 SPOCK2Q92563 424 aa16.74■□□□□ 0.27
LINC01002-225ENST00000633295 ECM2O94769 699 aaPredicted RBP16.72■□□□□ 0.27
LINC01002-225ENST00000633295 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC01002-225ENST00000633295 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
LINC01002-225ENST00000633295 KLHL34Q8N239 644 aa16.63■□□□□ 0.25
LINC01002-225ENST00000633295 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
LINC01002-225ENST00000633295 POLA2Q14181 598 aa16.57■□□□□ 0.24
LINC01002-225ENST00000633295 ZBTB12Q9Y330 459 aaPredicted RBP16.53■□□□□ 0.24
LINC01002-225ENST00000633295 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
LINC01002-225ENST00000633295 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
LINC01002-225ENST00000633295 RGL2O15211 777 aa16.5■□□□□ 0.23
LINC01002-225ENST00000633295 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
LINC01002-225ENST00000633295 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
LINC01002-225ENST00000633295 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
LINC01002-225ENST00000633295 NBR1Q14596 966 aa16.39■□□□□ 0.21
LINC01002-225ENST00000633295 PLCD3Q8N3E9 789 aa16.37■□□□□ 0.21
LINC01002-225ENST00000633295 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
LINC01002-225ENST00000633295 CAPN15O75808 1086 aa16.29■□□□□ 0.2
LINC01002-225ENST00000633295 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
LINC01002-225ENST00000633295 HS6ST3Q8IZP7 471 aa16.22■□□□□ 0.19
LINC01002-225ENST00000633295 MIER1Q8N108 512 aa16.22■□□□□ 0.19
LINC01002-225ENST00000633295 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
LINC01002-225ENST00000633295 ERICH6Q7L0X2 663 aa16.21■□□□□ 0.19
LINC01002-225ENST00000633295 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
LINC01002-225ENST00000633295 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
LINC01002-225ENST00000633295 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
LINC01002-225ENST00000633295 SSUH2Q9Y2M2 353 aa16.18■□□□□ 0.18
LINC01002-225ENST00000633295 SPDYE2BA6NHP3 402 aa16.16■□□□□ 0.18
LINC01002-225ENST00000633295 SPDYE6P0CI01 402 aa16.16■□□□□ 0.18
LINC01002-225ENST00000633295 SPDYE2Q495Y8 402 aa16.16■□□□□ 0.18
LINC01002-225ENST00000633295 TULP1O00294 542 aaPredicted RBP16.14■□□□□ 0.17
LINC01002-225ENST00000633295 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
LINC01002-225ENST00000633295 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
LINC01002-225ENST00000633295 GTF3C3Q9Y5Q9 886 aa16.11■□□□□ 0.17
LINC01002-225ENST00000633295 ABCB7O75027 752 aa16.07■□□□□ 0.16
LINC01002-225ENST00000633295 PABPN1Q86U42 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC01002-225ENST00000633295 ARXQ96QS3 562 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms