RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 MYOM2P54296 1465 aa19.8■□□□□ 0.76
LIMS4-204ENST00000632897 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
LIMS4-204ENST00000632897 ADGRB3O60242 1522 aa19.79■□□□□ 0.76
LIMS4-204ENST00000632897 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
LIMS4-204ENST00000632897 KIAA1210Q9ULL0 1709 aa19.78■□□□□ 0.76
LIMS4-204ENST00000632897 CEBPAP49715 358 aaPredicted RBP19.78■□□□□ 0.76
LIMS4-204ENST00000632897 NOS1P29475 1434 aa19.78■□□□□ 0.76
LIMS4-204ENST00000632897 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
LIMS4-204ENST00000632897 IFT172Q9UG01 1749 aa19.76■□□□□ 0.75
LIMS4-204ENST00000632897 ST20-MTHFSA0A0A6YYL1 179 aa19.74■□□□□ 0.75
LIMS4-204ENST00000632897 NBPF1Q3BBV0 1214 aa19.74■□□□□ 0.75
LIMS4-204ENST00000632897 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
LIMS4-204ENST00000632897 PIK3C2BO00750 1634 aa19.74■□□□□ 0.75
LIMS4-204ENST00000632897 NRXN1Q9ULB1 1477 aa19.71■□□□□ 0.75
LIMS4-204ENST00000632897 IQGAP1P46940 1657 aa19.71■□□□□ 0.75
LIMS4-204ENST00000632897 SYNMO15061 1565 aa19.71■□□□□ 0.75
LIMS4-204ENST00000632897 RPGRIP1LQ68CZ1 1315 aa19.69■□□□□ 0.74
LIMS4-204ENST00000632897 CLTCQ00610 1675 aaKnown RBP19.69■□□□□ 0.74
LIMS4-204ENST00000632897 STRCQ7RTU9 1775 aa19.68■□□□□ 0.74
LIMS4-204ENST00000632897 SCAF11Q99590 1463 aaKnown RBP19.67■□□□□ 0.74
LIMS4-204ENST00000632897 PPLO60437 1756 aa19.67■□□□□ 0.74
LIMS4-204ENST00000632897 ZMYM3Q14202 1370 aa19.66■□□□□ 0.74
LIMS4-204ENST00000632897 CERKQ8TCT0 537 aa19.65■□□□□ 0.74
LIMS4-204ENST00000632897 SLC52A1Q9NWF4 448 aa19.65■□□□□ 0.74
LIMS4-204ENST00000632897 CFAP65Q6ZU64 1925 aaKnown RBP19.64■□□□□ 0.74
LIMS4-204ENST00000632897 EIF3AQ14152 1382 aaKnown RBP19.64■□□□□ 0.73
LIMS4-204ENST00000632897 TESK2Q96S53 571 aa19.63■□□□□ 0.73
LIMS4-204ENST00000632897 PRKRIP1Q9H875 184 aaPredicted RBP19.62■□□□□ 0.73
LIMS4-204ENST00000632897 SETBP1Q9Y6X0 1596 aa19.62■□□□□ 0.73
LIMS4-204ENST00000632897 ZNF142P52746 1687 aaPredicted RBP19.62■□□□□ 0.73
LIMS4-204ENST00000632897 ADGRF5Q8IZF2 1346 aa19.61■□□□□ 0.73
LIMS4-204ENST00000632897 MYO3AQ8NEV4 1616 aa19.61■□□□□ 0.73
LIMS4-204ENST00000632897 ERVK-7P63135 1459 aa19.61■□□□□ 0.73
LIMS4-204ENST00000632897 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
LIMS4-204ENST00000632897 POLR3GLQ9BT43 218 aa19.6■□□□□ 0.73
LIMS4-204ENST00000632897 PIK3C2GO75747 1445 aa19.6■□□□□ 0.73
LIMS4-204ENST00000632897 TMF1P82094 1093 aa19.6■□□□□ 0.73
LIMS4-204ENST00000632897 NEXMIFQ5QGS0 1516 aa19.58■□□□□ 0.72
LIMS4-204ENST00000632897 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
LIMS4-204ENST00000632897 ZFYVE9O95405 1425 aa19.57■□□□□ 0.72
LIMS4-204ENST00000632897 DISP3Q9P2K9 1392 aa19.57■□□□□ 0.72
LIMS4-204ENST00000632897 CEP170BQ9Y4F5 1589 aaPredicted RBP19.57■□□□□ 0.72
LIMS4-204ENST00000632897 SPATA31D1Q6ZQQ2 1576 aa19.56■□□□□ 0.72
LIMS4-204ENST00000632897 TMEM131LA2VDJ0 1609 aa19.55■□□□□ 0.72
LIMS4-204ENST00000632897 IDI1Q13907 227 aa19.55■□□□□ 0.72
LIMS4-204ENST00000632897 CFAP70Q5T0N1 1121 aa19.55■□□□□ 0.72
LIMS4-204ENST00000632897 KTN1Q86UP2 1357 aaKnown RBP19.55■□□□□ 0.72
LIMS4-204ENST00000632897 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
LIMS4-204ENST00000632897 VGFO15240 615 aaPredicted RBP19.54■□□□□ 0.72
LIMS4-204ENST00000632897 CDCA8Q53HL2 280 aa19.54■□□□□ 0.72
LIMS4-204ENST00000632897 C14orf93Q9H972 538 aaKnown RBP19.54■□□□□ 0.72
LIMS4-204ENST00000632897 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.71
LIMS4-204ENST00000632897 ADGRB1O14514 1584 aa19.51■□□□□ 0.71
LIMS4-204ENST00000632897 A2ML1A8K2U0 1454 aa19.49■□□□□ 0.71
LIMS4-204ENST00000632897 SBNO2Q9Y2G9 1366 aa19.49■□□□□ 0.71
LIMS4-204ENST00000632897 MYO5BQ9ULV0 1848 aa19.48■□□□□ 0.71
LIMS4-204ENST00000632897 FBXO31Q5XUX0 539 aaPredicted RBP19.47■□□□□ 0.71
LIMS4-204ENST00000632897 TNRQ92752 1358 aa19.46■□□□□ 0.71
LIMS4-204ENST00000632897 RALBP1Q15311 655 aa19.46■□□□□ 0.71
LIMS4-204ENST00000632897 KDM5AP29375 1690 aaKnown RBP19.46■□□□□ 0.71
LIMS4-204ENST00000632897 MRS2Q9HD23 443 aa19.45■□□□□ 0.7
LIMS4-204ENST00000632897 LTBP4Q8N2S1 1624 aa19.44■□□□□ 0.7
LIMS4-204ENST00000632897 GTF3C3Q9Y5Q9 886 aa19.44■□□□□ 0.7
LIMS4-204ENST00000632897 NLRP1Q9C000 1473 aa19.43■□□□□ 0.7
LIMS4-204ENST00000632897 PER1O15534 1290 aaPredicted RBP19.42■□□□□ 0.7
LIMS4-204ENST00000632897 NCKAP5LQ9HCH0 1330 aa19.42■□□□□ 0.7
LIMS4-204ENST00000632897 CENPJQ9HC77 1338 aaPredicted RBP19.41■□□□□ 0.7
LIMS4-204ENST00000632897 CCDC184Q52MB2 194 aa19.41■□□□□ 0.7
LIMS4-204ENST00000632897 PARD3Q8TEW0 1356 aa19.41■□□□□ 0.7
LIMS4-204ENST00000632897 MYBBP1AQ9BQG0 1328 aaKnown RBP19.4■□□□□ 0.7
LIMS4-204ENST00000632897 QRICH2Q9H0J4 1663 aa19.4■□□□□ 0.7
LIMS4-204ENST00000632897 PANK3Q9H999 370 aa19.4■□□□□ 0.7
LIMS4-204ENST00000632897 STAG3Q9UJ98 1225 aa19.4■□□□□ 0.7
LIMS4-204ENST00000632897 MYOM1P52179 1685 aa19.39■□□□□ 0.69
LIMS4-204ENST00000632897 BRD4O60885 1362 aaPredicted RBP19.38■□□□□ 0.69
LIMS4-204ENST00000632897 ARHGEF28Q8N1W1 1705 aaKnown RBP19.38■□□□□ 0.69
LIMS4-204ENST00000632897 THEMISQ8N1K5 641 aaPredicted RBP19.37■□□□□ 0.69
LIMS4-204ENST00000632897 TRAK1Q9UPV9 953 aa19.36■□□□□ 0.69
LIMS4-204ENST00000632897 ASXL1Q8IXJ9 1541 aa19.36■□□□□ 0.69
LIMS4-204ENST00000632897 NUTM2DQ5VT03 806 aaPredicted RBP19.35■□□□□ 0.69
LIMS4-204ENST00000632897 RIMS2Q9UQ26 1411 aa19.35■□□□□ 0.69
LIMS4-204ENST00000632897 TMEM132EQ6IEE7 984 aa19.35■□□□□ 0.69
LIMS4-204ENST00000632897 HNRNPUQ00839 825 aaKnown RBP eCLIP19.34■□□□□ 0.69
LIMS4-204ENST00000632897 ANKLE2Q86XL3 938 aa19.34■□□□□ 0.69
LIMS4-204ENST00000632897 ALKQ9UM73 1620 aa19.34■□□□□ 0.69
LIMS4-204ENST00000632897 ZNF335Q9H4Z2 1342 aaPredicted RBP19.33■□□□□ 0.69
LIMS4-204ENST00000632897 PUS7Q96PZ0 661 aaKnown RBP19.33■□□□□ 0.68
LIMS4-204ENST00000632897 NPC1L1Q9UHC9 1359 aa19.33■□□□□ 0.68
LIMS4-204ENST00000632897 NLRP13Q86W25 1043 aa19.32■□□□□ 0.68
LIMS4-204ENST00000632897 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.32■□□□□ 0.68
LIMS4-204ENST00000632897 FAM9BQ8IZU0 186 aa19.31■□□□□ 0.68
LIMS4-204ENST00000632897 CPS1P31327 1500 aa19.31■□□□□ 0.68
LIMS4-204ENST00000632897 TMC1Q8TDI8 760 aa19.3■□□□□ 0.68
LIMS4-204ENST00000632897 KNSTRNQ9Y448 316 aa19.3■□□□□ 0.68
LIMS4-204ENST00000632897 CNGB1Q14028 1251 aaPredicted RBP19.29■□□□□ 0.68
LIMS4-204ENST00000632897 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
LIMS4-204ENST00000632897 HDGFP51858 240 aaKnown RBP19.28■□□□□ 0.68
LIMS4-204ENST00000632897 PNISRQ8TF01 805 aaKnown RBP19.28■□□□□ 0.68
LIMS4-204ENST00000632897 UBR1Q8IWV7 1749 aa19.28■□□□□ 0.68
LIMS4-204ENST00000632897 MED14O60244 1454 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms