RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 CAMSAP1Q5T5Y3 1602 aa7.62□□□□□ -1.19
NEK3-211ENST00000629912 COL17A1Q9UMD9 1497 aaPredicted RBP7.62□□□□□ -1.19
NEK3-211ENST00000629912 YEATS2Q9ULM3 1422 aa7.61□□□□□ -1.19
NEK3-211ENST00000629912 PIK3C2BO00750 1634 aa7.61□□□□□ -1.19
NEK3-211ENST00000629912 CDCA8Q53HL2 280 aa7.61□□□□□ -1.19
NEK3-211ENST00000629912 POLR3GLQ9BT43 218 aa7.61□□□□□ -1.19
NEK3-211ENST00000629912 SLC52A1Q9NWF4 448 aa7.61□□□□□ -1.19
NEK3-211ENST00000629912 TSPOAP1O95153 1857 aa7.61□□□□□ -1.19
NEK3-211ENST00000629912 ADGRB3O60242 1522 aa7.61□□□□□ -1.19
NEK3-211ENST00000629912 AGLP35573 1532 aa7.61□□□□□ -1.19
NEK3-211ENST00000629912 ADGRF5Q8IZF2 1346 aa7.6□□□□□ -1.19
NEK3-211ENST00000629912 UGGT1Q9NYU2 1555 aa7.6□□□□□ -1.19
NEK3-211ENST00000629912 KIF13AQ9H1H9 1805 aa7.6□□□□□ -1.19
NEK3-211ENST00000629912 C14orf93Q9H972 538 aaKnown RBP7.6□□□□□ -1.19
NEK3-211ENST00000629912 MRS2Q9HD23 443 aa7.6□□□□□ -1.19
NEK3-211ENST00000629912 PPLO60437 1756 aa7.6□□□□□ -1.19
NEK3-211ENST00000629912 SIGLEC1Q9BZZ2 1709 aa7.6□□□□□ -1.19
NEK3-211ENST00000629912 DISP3Q9P2K9 1392 aa7.59□□□□□ -1.19
NEK3-211ENST00000629912 SETBP1Q9Y6X0 1596 aa7.59□□□□□ -1.19
NEK3-211ENST00000629912 CFAP70Q5T0N1 1121 aa7.59□□□□□ -1.19
NEK3-211ENST00000629912 MROH2AA6NES4 1674 aa7.59□□□□□ -1.19
NEK3-211ENST00000629912 ZFYVE9O95405 1425 aa7.59□□□□□ -1.19
NEK3-211ENST00000629912 BRD4O60885 1362 aaPredicted RBP7.59□□□□□ -1.2
NEK3-211ENST00000629912 EIF3AQ14152 1382 aaKnown RBP7.59□□□□□ -1.2
NEK3-211ENST00000629912 VGFO15240 615 aaPredicted RBP7.58□□□□□ -1.2
NEK3-211ENST00000629912 HNRNPUQ00839 825 aaKnown RBP eCLIP7.58□□□□□ -1.2
NEK3-211ENST00000629912 IDI1Q13907 227 aa7.58□□□□□ -1.2
NEK3-211ENST00000629912 PNISRQ8TF01 805 aaKnown RBP7.58□□□□□ -1.2
NEK3-211ENST00000629912 PANK3Q9H999 370 aa7.58□□□□□ -1.2
NEK3-211ENST00000629912 SYNMO15061 1565 aa7.58□□□□□ -1.2
NEK3-211ENST00000629912 MYBBP1AQ9BQG0 1328 aaKnown RBP7.57□□□□□ -1.2
NEK3-211ENST00000629912 CHGAP10645 457 aaKnown RBP7.57□□□□□ -1.2
NEK3-211ENST00000629912 PARD3Q8TEW0 1356 aa7.57□□□□□ -1.2
NEK3-211ENST00000629912 SBNO2Q9Y2G9 1366 aa7.57□□□□□ -1.2
NEK3-211ENST00000629912 PREX1Q8TCU6 1659 aa7.57□□□□□ -1.2
NEK3-211ENST00000629912 PIK3C2GO75747 1445 aa7.56□□□□□ -1.2
NEK3-211ENST00000629912 FAM9BQ8IZU0 186 aa7.56□□□□□ -1.2
NEK3-211ENST00000629912 TMC1Q8TDI8 760 aa7.56□□□□□ -1.2
NEK3-211ENST00000629912 PUS7Q96PZ0 661 aaKnown RBP7.56□□□□□ -1.2
NEK3-211ENST00000629912 MYO3AQ8NEV4 1616 aa7.56□□□□□ -1.2
NEK3-211ENST00000629912 ZBED9Q6R2W3 1325 aa7.55□□□□□ -1.2
NEK3-211ENST00000629912 NLRP13Q86W25 1043 aa7.55□□□□□ -1.2
NEK3-211ENST00000629912 SUPT16HQ9Y5B9 1047 aaKnown RBP7.55□□□□□ -1.2
NEK3-211ENST00000629912 INSRP06213 1382 aa7.55□□□□□ -1.2
NEK3-211ENST00000629912 NPC1L1Q9UHC9 1359 aa7.55□□□□□ -1.2
NEK3-211ENST00000629912 NEXMIFQ5QGS0 1516 aa7.54□□□□□ -1.2
NEK3-211ENST00000629912 TMEM131LA2VDJ0 1609 aa7.54□□□□□ -1.2
NEK3-211ENST00000629912 LRPPRCP42704 1394 aaKnown RBP7.54□□□□□ -1.2
NEK3-211ENST00000629912 ADGRB1O14514 1584 aa7.54□□□□□ -1.2
NEK3-211ENST00000629912 ERVK-7P63135 1459 aa7.53□□□□□ -1.2
NEK3-211ENST00000629912 KDM5AP29375 1690 aaKnown RBP7.53□□□□□ -1.2
NEK3-211ENST00000629912 CENPJQ9HC77 1338 aaPredicted RBP7.52□□□□□ -1.2
NEK3-211ENST00000629912 MYO5BQ9ULV0 1848 aa7.52□□□□□ -1.2
NEK3-211ENST00000629912 AMER1Q5JTC6 1135 aaPredicted RBP7.52□□□□□ -1.21
NEK3-211ENST00000629912 FBXO31Q5XUX0 539 aaPredicted RBP7.52□□□□□ -1.21
NEK3-211ENST00000629912 KNSTRNQ9Y448 316 aa7.52□□□□□ -1.21
NEK3-211ENST00000629912 ARHGEF40Q8TER5 1519 aa7.52□□□□□ -1.21
NEK3-211ENST00000629912 CLTCQ00610 1675 aaKnown RBP7.51□□□□□ -1.21
NEK3-211ENST00000629912 SPATA31D1Q6ZQQ2 1576 aa7.51□□□□□ -1.21
NEK3-211ENST00000629912 ERICH6BQ5W0A0 696 aa7.51□□□□□ -1.21
NEK3-211ENST00000629912 TRAK1Q9UPV9 953 aa7.51□□□□□ -1.21
NEK3-211ENST00000629912 MYOM1P52179 1685 aa7.51□□□□□ -1.21
NEK3-211ENST00000629912 NEFLP07196 543 aa7.5□□□□□ -1.21
NEK3-211ENST00000629912 CC2D1BQ5T0F9 858 aaKnown RBP7.5□□□□□ -1.21
NEK3-211ENST00000629912 TMEM132EQ6IEE7 984 aa7.5□□□□□ -1.21
NEK3-211ENST00000629912 ASXL1Q8IXJ9 1541 aa7.5□□□□□ -1.21
NEK3-211ENST00000629912 ZMYM3Q14202 1370 aa7.49□□□□□ -1.21
NEK3-211ENST00000629912 CNGB1Q14028 1251 aaPredicted RBP7.49□□□□□ -1.21
NEK3-211ENST00000629912 FKBP8Q14318 412 aa7.49□□□□□ -1.21
NEK3-211ENST00000629912 SMG6Q86US8 1419 aaKnown RBP7.49□□□□□ -1.21
NEK3-211ENST00000629912 QRICH2Q9H0J4 1663 aa7.48□□□□□ -1.21
NEK3-211ENST00000629912 MSH5O43196 834 aa7.48□□□□□ -1.21
NEK3-211ENST00000629912 PPP2R1AP30153 589 aa7.48□□□□□ -1.21
NEK3-211ENST00000629912 HDGFP51858 240 aaKnown RBP7.48□□□□□ -1.21
NEK3-211ENST00000629912 PDE3BQ13370 1112 aa7.48□□□□□ -1.21
NEK3-211ENST00000629912 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.48□□□□□ -1.21
NEK3-211ENST00000629912 CARD14Q9BXL6 1004 aa7.48□□□□□ -1.21
NEK3-211ENST00000629912 ESF1Q9H501 851 aaKnown RBP7.48□□□□□ -1.21
NEK3-211ENST00000629912 A2ML1A8K2U0 1454 aa7.48□□□□□ -1.21
NEK3-211ENST00000629912 EVC2Q86UK5 1308 aa7.48□□□□□ -1.21
NEK3-211ENST00000629912 ARHGEF28Q8N1W1 1705 aaKnown RBP7.47□□□□□ -1.21
NEK3-211ENST00000629912 NUTM2DQ5VT03 806 aaPredicted RBP7.47□□□□□ -1.21
NEK3-211ENST00000629912 SIRT1Q96EB6 747 aa7.47□□□□□ -1.21
NEK3-211ENST00000629912 STAG3Q9UJ98 1225 aa7.47□□□□□ -1.21
NEK3-211ENST00000629912 ALKQ9UM73 1620 aa7.47□□□□□ -1.21
NEK3-211ENST00000629912 MLECQ14165 292 aa7.46□□□□□ -1.22
NEK3-211ENST00000629912 NUDCQ9Y266 331 aa7.46□□□□□ -1.22
NEK3-211ENST00000629912 YTHDC2Q9H6S0 1430 aaKnown RBP7.45□□□□□ -1.22
NEK3-211ENST00000629912 RIMS2Q9UQ26 1411 aa7.45□□□□□ -1.22
NEK3-211ENST00000629912 PELP1Q8IZL8 1130 aaKnown RBP7.45□□□□□ -1.22
NEK3-211ENST00000629912 SLC12A5Q9H2X9 1139 aa7.45□□□□□ -1.22
NEK3-211ENST00000629912 RNF123Q5XPI4 1314 aa7.45□□□□□ -1.22
NEK3-211ENST00000629912 NINLQ9Y2I6 1382 aa7.45□□□□□ -1.22
NEK3-211ENST00000629912 BLMP54132 1417 aaPredicted RBP7.44□□□□□ -1.22
NEK3-211ENST00000629912 PTPRMP28827 1452 aa7.44□□□□□ -1.22
NEK3-211ENST00000629912 DLC1Q96QB1 1528 aa7.44□□□□□ -1.22
NEK3-211ENST00000629912 USP32Q8NFA0 1604 aa7.44□□□□□ -1.22
NEK3-211ENST00000629912 TNRQ92752 1358 aa7.44□□□□□ -1.22
NEK3-211ENST00000629912 ABCC11Q96J66 1382 aa7.44□□□□□ -1.22
NEK3-211ENST00000629912 TULP4Q9NRJ4 1543 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms