RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 ZNF142P52746 1687 aaPredicted RBP16.62■□□□□ 0.25
PTPN7-219ENST00000629151 SLIT1O75093 1534 aa16.62■□□□□ 0.25
PTPN7-219ENST00000629151 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
PTPN7-219ENST00000629151 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
PTPN7-219ENST00000629151 RIMS2Q9UQ26 1411 aa16.62■□□□□ 0.25
PTPN7-219ENST00000629151 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
PTPN7-219ENST00000629151 DCAF11Q8TEB1 546 aa16.61■□□□□ 0.25
PTPN7-219ENST00000629151 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
PTPN7-219ENST00000629151 L3MBTL2Q969R5 705 aa16.6■□□□□ 0.25
PTPN7-219ENST00000629151 HSPA2P54652 639 aa16.58■□□□□ 0.24
PTPN7-219ENST00000629151 UBR1Q8IWV7 1749 aa16.58■□□□□ 0.24
PTPN7-219ENST00000629151 KIF1BO60333 1816 aa16.58■□□□□ 0.24
PTPN7-219ENST00000629151 LTKP29376 864 aa16.57■□□□□ 0.24
PTPN7-219ENST00000629151 SCAF11Q99590 1463 aaKnown RBP16.56■□□□□ 0.24
PTPN7-219ENST00000629151 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
PTPN7-219ENST00000629151 PLEKHG1Q9ULL1 1385 aa16.55■□□□□ 0.24
PTPN7-219ENST00000629151 BCANQ96GW7 911 aa16.55■□□□□ 0.24
PTPN7-219ENST00000629151 MYOM2P54296 1465 aa16.54■□□□□ 0.24
PTPN7-219ENST00000629151 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
PTPN7-219ENST00000629151 MED14O60244 1454 aa16.54■□□□□ 0.24
PTPN7-219ENST00000629151 NCKAP5LQ9HCH0 1330 aa16.53■□□□□ 0.24
PTPN7-219ENST00000629151 TBX22Q9Y458 520 aa16.53■□□□□ 0.24
PTPN7-219ENST00000629151 NEXMIFQ5QGS0 1516 aa16.53■□□□□ 0.24
PTPN7-219ENST00000629151 ADGRF5Q8IZF2 1346 aa16.51■□□□□ 0.23
PTPN7-219ENST00000629151 NUTM2DQ5VT03 806 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-219ENST00000629151 NPHP4O75161 1426 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-219ENST00000629151 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
PTPN7-219ENST00000629151 NRXN1Q9ULB1 1477 aa16.49■□□□□ 0.23
PTPN7-219ENST00000629151 PIK3C2GO75747 1445 aa16.47■□□□□ 0.23
PTPN7-219ENST00000629151 PIK3R4Q99570 1358 aa16.47■□□□□ 0.23
PTPN7-219ENST00000629151 PRAG1Q86YV5 1406 aa16.45■□□□□ 0.22
PTPN7-219ENST00000629151 SETBP1Q9Y6X0 1596 aa16.44■□□□□ 0.22
PTPN7-219ENST00000629151 SLC26A8Q96RN1 970 aa16.44■□□□□ 0.22
PTPN7-219ENST00000629151 PPLO60437 1756 aa16.43■□□□□ 0.22
PTPN7-219ENST00000629151 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
PTPN7-219ENST00000629151 ADAMTS13Q76LX8 1427 aa16.43■□□□□ 0.22
PTPN7-219ENST00000629151 MYO5BQ9ULV0 1848 aa16.42■□□□□ 0.22
PTPN7-219ENST00000629151 DIP2AQ14689 1571 aa16.42■□□□□ 0.22
PTPN7-219ENST00000629151 NBPF8Q3BBV2 869 aa16.41■□□□□ 0.22
PTPN7-219ENST00000629151 IFT172Q9UG01 1749 aa16.41■□□□□ 0.22
PTPN7-219ENST00000629151 KCNA6P17658 529 aa16.4■□□□□ 0.22
PTPN7-219ENST00000629151 SIRT1Q96EB6 747 aa16.39■□□□□ 0.21
PTPN7-219ENST00000629151 ALKQ9UM73 1620 aa16.38■□□□□ 0.21
PTPN7-219ENST00000629151 IQGAP1P46940 1657 aa16.38■□□□□ 0.21
PTPN7-219ENST00000629151 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-219ENST00000629151 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
PTPN7-219ENST00000629151 STRCQ7RTU9 1775 aa16.37■□□□□ 0.21
PTPN7-219ENST00000629151 LAMC1P11047 1609 aa16.37■□□□□ 0.21
PTPN7-219ENST00000629151 METP08581 1390 aa16.37■□□□□ 0.21
PTPN7-219ENST00000629151 LRPPRCP42704 1394 aaKnown RBP16.37■□□□□ 0.21
PTPN7-219ENST00000629151 ABCC11Q96J66 1382 aa16.37■□□□□ 0.21
PTPN7-219ENST00000629151 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
PTPN7-219ENST00000629151 GPRASP1Q5JY77 1395 aa16.36■□□□□ 0.21
PTPN7-219ENST00000629151 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
PTPN7-219ENST00000629151 TMEM132EQ6IEE7 984 aa16.35■□□□□ 0.21
PTPN7-219ENST00000629151 CARD11Q9BXL7 1154 aa16.35■□□□□ 0.21
PTPN7-219ENST00000629151 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
PTPN7-219ENST00000629151 RALGAPBQ86X10 1494 aa16.35■□□□□ 0.21
PTPN7-219ENST00000629151 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
PTPN7-219ENST00000629151 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
PTPN7-219ENST00000629151 NRXN3Q9Y4C0 1643 aa16.33■□□□□ 0.2
PTPN7-219ENST00000629151 KIAA1210Q9ULL0 1709 aa16.33■□□□□ 0.2
PTPN7-219ENST00000629151 TECPR2O15040 1411 aa16.31■□□□□ 0.2
PTPN7-219ENST00000629151 EIF3AQ14152 1382 aaKnown RBP16.31■□□□□ 0.2
PTPN7-219ENST00000629151 STK26Q9P289 416 aa16.31■□□□□ 0.2
PTPN7-219ENST00000629151 ADGRB1O14514 1584 aa16.3■□□□□ 0.2
PTPN7-219ENST00000629151 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
PTPN7-219ENST00000629151 NCOA3Q9Y6Q9 1424 aa16.29■□□□□ 0.2
PTPN7-219ENST00000629151 PROSER2Q86WR7 435 aaPredicted RBP16.29■□□□□ 0.2
PTPN7-219ENST00000629151 TRAK1Q9UPV9 953 aa16.29■□□□□ 0.2
PTPN7-219ENST00000629151 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
PTPN7-219ENST00000629151 PTCH1Q13635 1447 aa16.28■□□□□ 0.2
PTPN7-219ENST00000629151 PTPRUQ92729 1446 aa16.28■□□□□ 0.2
PTPN7-219ENST00000629151 ZNF335Q9H4Z2 1342 aaPredicted RBP16.28■□□□□ 0.2
PTPN7-219ENST00000629151 POGKQ9P215 609 aa16.28■□□□□ 0.2
PTPN7-219ENST00000629151 TRPM1Q7Z4N2 1603 aa16.27■□□□□ 0.2
PTPN7-219ENST00000629151 EIF4G2P78344 907 aaKnown RBP eCLIP16.27■□□□□ 0.2
PTPN7-219ENST00000629151 CPS1P31327 1500 aa16.27■□□□□ 0.2
PTPN7-219ENST00000629151 DLC1Q96QB1 1528 aa16.26■□□□□ 0.19
PTPN7-219ENST00000629151 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
PTPN7-219ENST00000629151 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
PTPN7-219ENST00000629151 ASXL1Q8IXJ9 1541 aa16.24■□□□□ 0.19
PTPN7-219ENST00000629151 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
PTPN7-219ENST00000629151 SETD1AO15047 1707 aaKnown RBP16.24■□□□□ 0.19
PTPN7-219ENST00000629151 ROBO2Q9HCK4 1378 aa16.24■□□□□ 0.19
PTPN7-219ENST00000629151 USP47Q96K76 1375 aa16.23■□□□□ 0.19
PTPN7-219ENST00000629151 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
PTPN7-219ENST00000629151 C19orf44Q9H6X5 657 aa16.22■□□□□ 0.19
PTPN7-219ENST00000629151 C14orf37Q86TY3 774 aa16.21■□□□□ 0.19
PTPN7-219ENST00000629151 CHD2O14647 1828 aaKnown RBP16.21■□□□□ 0.19
PTPN7-219ENST00000629151 XRN1Q8IZH2 1706 aaKnown RBP16.2■□□□□ 0.18
PTPN7-219ENST00000629151 TMEM94Q12767 1356 aa16.2■□□□□ 0.18
PTPN7-219ENST00000629151 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
PTPN7-219ENST00000629151 ST20-MTHFSA0A0A6YYL1 179 aa16.19■□□□□ 0.18
PTPN7-219ENST00000629151 MSH6P52701 1360 aa16.18■□□□□ 0.18
PTPN7-219ENST00000629151 CDCA8Q53HL2 280 aa16.18■□□□□ 0.18
PTPN7-219ENST00000629151 CADPS2Q86UW7 1296 aa16.18■□□□□ 0.18
PTPN7-219ENST00000629151 LRRC7Q96NW7 1537 aa16.18■□□□□ 0.18
PTPN7-219ENST00000629151 KNDC1Q76NI1 1749 aa16.17■□□□□ 0.18
PTPN7-219ENST00000629151 LTBP4Q8N2S1 1624 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms