RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 HPS5Q9UPZ3 1129 aa5.85□□□□□ -1.47
SCARNA4-201ENST00000629045 SLC24A3Q9HC58 644 aa5.84□□□□□ -1.47
SCARNA4-201ENST00000629045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.83□□□□□ -1.48
SCARNA4-201ENST00000629045 WBP1LQ9NX94 342 aa5.83□□□□□ -1.48
SCARNA4-201ENST00000629045 MDM2Q00987 491 aaPredicted RBP5.82□□□□□ -1.48
SCARNA4-201ENST00000629045 TPRNQ4KMQ1 711 aa5.82□□□□□ -1.48
SCARNA4-201ENST00000629045 HDGFP51858 240 aaKnown RBP5.81□□□□□ -1.48
SCARNA4-201ENST00000629045 HCSTQ9UBK5 93 aa5.81□□□□□ -1.48
SCARNA4-201ENST00000629045 TSR3Q9UJK0 312 aaKnown RBP5.81□□□□□ -1.48
SCARNA4-201ENST00000629045 SLF2Q8IX21 1173 aa5.8□□□□□ -1.48
SCARNA4-201ENST00000629045 DDX11L8A8MPP1 907 aa5.79□□□□□ -1.48
SCARNA4-201ENST00000629045 SLC10A3P09131 477 aa5.79□□□□□ -1.48
SCARNA4-201ENST00000629045 PPP4CP60510 307 aa5.79□□□□□ -1.48
SCARNA4-201ENST00000629045 TTLL12Q14166 644 aaPredicted RBP5.79□□□□□ -1.48
SCARNA4-201ENST00000629045 AK7Q96M32 723 aa5.79□□□□□ -1.48
SCARNA4-201ENST00000629045 REPIN1Q9BWE0 567 aaKnown RBP5.79□□□□□ -1.48
SCARNA4-201ENST00000629045 TRIM66O15016 1216 aa5.78□□□□□ -1.48
SCARNA4-201ENST00000629045 CFHP08603 1231 aa5.78□□□□□ -1.48
SCARNA4-201ENST00000629045 PRKCSHP14314 528 aaPredicted RBP5.78□□□□□ -1.48
SCARNA4-201ENST00000629045 APLP1P51693 650 aa5.78□□□□□ -1.48
SCARNA4-201ENST00000629045 RDH13Q8NBN7 331 aa5.78□□□□□ -1.48
SCARNA4-201ENST00000629045 DAXXQ9UER7 740 aaPredicted RBP5.78□□□□□ -1.48
SCARNA4-201ENST00000629045 CLCN1P35523 988 aa5.77□□□□□ -1.49
SCARNA4-201ENST00000629045 SLC4A3P48751 1232 aa5.77□□□□□ -1.49
SCARNA4-201ENST00000629045 AMHR2Q16671 573 aa5.77□□□□□ -1.49
SCARNA4-201ENST00000629045 PARP9Q8IXQ6 854 aa5.77□□□□□ -1.49
SCARNA4-201ENST00000629045 GPCPD1Q9NPB8 672 aa5.77□□□□□ -1.49
SCARNA4-201ENST00000629045 PDE4DQ08499 809 aa5.75□□□□□ -1.49
SCARNA4-201ENST00000629045 GIGYF2Q6Y7W6 1299 aaKnown RBP5.75□□□□□ -1.49
SCARNA4-201ENST00000629045 TMUB1Q9BVT8 246 aa5.75□□□□□ -1.49
SCARNA4-201ENST00000629045 FAM217BQ9NTX9 383 aaPredicted RBP5.75□□□□□ -1.49
SCARNA4-201ENST00000629045 CD46P15529 392 aa5.74□□□□□ -1.49
SCARNA4-201ENST00000629045 NYAP1Q6ZVC0 841 aa5.74□□□□□ -1.49
SCARNA4-201ENST00000629045 SULF1Q8IWU6 871 aa5.74□□□□□ -1.49
SCARNA4-201ENST00000629045 COPS2P61201 443 aa5.73□□□□□ -1.49
SCARNA4-201ENST00000629045 KMT5BQ4FZB7 885 aa5.73□□□□□ -1.49
SCARNA4-201ENST00000629045 NECTIN2Q92692 538 aa5.73□□□□□ -1.49
SCARNA4-201ENST00000629045 GPBP1L1Q9HC44 474 aaPredicted RBP5.73□□□□□ -1.49
SCARNA4-201ENST00000629045 ACTN4O43707 911 aaKnown RBP5.72□□□□□ -1.49
SCARNA4-201ENST00000629045 MS4A1P11836 297 aa5.72□□□□□ -1.49
SCARNA4-201ENST00000629045 GCGRP47871 477 aa5.72□□□□□ -1.49
SCARNA4-201ENST00000629045 FUT2Q10981 343 aa5.72□□□□□ -1.49
SCARNA4-201ENST00000629045 PUS10Q3MIT2 529 aaKnown RBP5.72□□□□□ -1.49
SCARNA4-201ENST00000629045 BLOC1S3Q6QNY0 202 aa5.72□□□□□ -1.49
SCARNA4-201ENST00000629045 MTRQ99707 1265 aa5.72□□□□□ -1.49
SCARNA4-201ENST00000629045 PLA2G2EQ9NZK7 142 aa5.72□□□□□ -1.49
SCARNA4-201ENST00000629045 PCDHB3Q9Y5E6 796 aa5.72□□□□□ -1.49
SCARNA4-201ENST00000629045 SSTR3P32745 418 aaPredicted RBP5.71□□□□□ -1.5
SCARNA4-201ENST00000629045 TJAP1Q5JTD0 557 aa5.71□□□□□ -1.5
SCARNA4-201ENST00000629045 ZNF516Q92618 1163 aa5.71□□□□□ -1.5
SCARNA4-201ENST00000629045 HLA-CQ95604 372 aa5.71□□□□□ -1.5
SCARNA4-201ENST00000629045 PRR14Q9BWN1 585 aa5.71□□□□□ -1.5
SCARNA4-201ENST00000629045 ITGBL1O95965 494 aaPredicted RBP5.7□□□□□ -1.5
SCARNA4-201ENST00000629045 RSPH4AQ5TD94 716 aa5.7□□□□□ -1.5
SCARNA4-201ENST00000629045 TLL1O43897 1013 aa5.69□□□□□ -1.5
SCARNA4-201ENST00000629045 BEGAINQ9BUH8 593 aa5.69□□□□□ -1.5
SCARNA4-201ENST00000629045 KDM4AO75164 1064 aa5.68□□□□□ -1.5
SCARNA4-201ENST00000629045 GUCA2AQ02747 115 aa5.68□□□□□ -1.5
SCARNA4-201ENST00000629045 KCNC4Q03721 635 aa5.68□□□□□ -1.5
SCARNA4-201ENST00000629045 NEUROD2Q15784 382 aa5.68□□□□□ -1.5
SCARNA4-201ENST00000629045 NKX2-3Q8TAU0 364 aa5.68□□□□□ -1.5
SCARNA4-201ENST00000629045 KDM4CQ9H3R0 1056 aa5.68□□□□□ -1.5
SCARNA4-201ENST00000629045 IL21Q9HBE4 155 aa5.68□□□□□ -1.5
SCARNA4-201ENST00000629045 HOXA2O43364 376 aa5.66□□□□□ -1.5
SCARNA4-201ENST00000629045 ZPR1O75312 459 aa5.66□□□□□ -1.5
SCARNA4-201ENST00000629045 ATP6V1AP38606 617 aa5.66□□□□□ -1.5
SCARNA4-201ENST00000629045 BRPF1P55201 1214 aaPredicted RBP5.66□□□□□ -1.5
SCARNA4-201ENST00000629045 MORN1Q5T089 497 aa5.66□□□□□ -1.5
SCARNA4-201ENST00000629045 NUTM1Q86Y26 1132 aa5.66□□□□□ -1.5
SCARNA4-201ENST00000629045 SPIRE2Q8WWL2 714 aa5.66□□□□□ -1.5
SCARNA4-201ENST00000629045 SLC27A5Q9Y2P5 690 aa5.66□□□□□ -1.5
SCARNA4-201ENST00000629045 RNF19BQ6ZMZ0 732 aa5.65□□□□□ -1.5
SCARNA4-201ENST00000629045 FAM117AQ9C073 453 aa5.65□□□□□ -1.5
SCARNA4-201ENST00000629045 MOXD2PA6NHM9 499 aa5.64□□□□□ -1.51
SCARNA4-201ENST00000629045 NR1I2O75469 434 aa5.64□□□□□ -1.51
SCARNA4-201ENST00000629045 NDUFV2P19404 249 aa5.64□□□□□ -1.51
SCARNA4-201ENST00000629045 SCUBE3Q8IX30 993 aa5.64□□□□□ -1.51
SCARNA4-201ENST00000629045 TBC1D2Q9BYX2 928 aa5.64□□□□□ -1.51
SCARNA4-201ENST00000629045 USP46P62068 366 aa5.63□□□□□ -1.51
SCARNA4-201ENST00000629045 A0A0G2JS52 829 aa5.62□□□□□ -1.51
SCARNA4-201ENST00000629045 PLEKHG3A1L390 1219 aa5.62□□□□□ -1.51
SCARNA4-201ENST00000629045 FDX1P10109 184 aa5.62□□□□□ -1.51
SCARNA4-201ENST00000629045 GRIPAP1Q4V328 841 aa5.62□□□□□ -1.51
SCARNA4-201ENST00000629045 MYSM1Q5VVJ2 828 aa5.62□□□□□ -1.51
SCARNA4-201ENST00000629045 SYMPKQ92797 1274 aaKnown RBP5.62□□□□□ -1.51
SCARNA4-201ENST00000629045 THAP11Q96EK4 314 aa5.62□□□□□ -1.51
SCARNA4-201ENST00000629045 PRDM9Q9NQV7 894 aa5.62□□□□□ -1.51
SCARNA4-201ENST00000629045 PCDHGC3Q9UN70 934 aa5.62□□□□□ -1.51
SCARNA4-201ENST00000629045 S1PR4O95977 384 aa5.61□□□□□ -1.51
SCARNA4-201ENST00000629045 ADH1BP00325 375 aa5.61□□□□□ -1.51
SCARNA4-201ENST00000629045 CSPP1Q1MSJ5 1256 aa5.61□□□□□ -1.51
SCARNA4-201ENST00000629045 IFFO2Q5TF58 517 aa5.61□□□□□ -1.51
SCARNA4-201ENST00000629045 SPSB2Q99619 263 aa5.61□□□□□ -1.51
SCARNA4-201ENST00000629045 FMNL1O95466 1100 aaPredicted RBP5.6□□□□□ -1.51
SCARNA4-201ENST00000629045 PPP1R18Q6NYC8 613 aa5.6□□□□□ -1.51
SCARNA4-201ENST00000629045 RSBN1LQ6PCB5 846 aaPredicted RBP5.6□□□□□ -1.51
SCARNA4-201ENST00000629045 BRICD5Q6PL45 260 aa5.6□□□□□ -1.51
SCARNA4-201ENST00000629045 LIMD1Q9UGP4 676 aa5.6□□□□□ -1.51
SCARNA4-201ENST00000629045 IL27Q8NEV9 243 aa5.59□□□□□ -1.51
SCARNA4-201ENST00000629045 DDRGK1Q96HY6 314 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms