RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 ERVK-7P63135 1459 aa11.84□□□□□ -0.51
TCF4-266ENST00000628689 YY1P25490 414 aa11.84□□□□□ -0.51
TCF4-266ENST00000628689 AHDC1Q5TGY3 1603 aaPredicted RBP11.84□□□□□ -0.51
TCF4-266ENST00000628689 ZNF644Q9H582 1327 aaPredicted RBP11.84□□□□□ -0.51
TCF4-266ENST00000628689 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
TCF4-266ENST00000628689 ABCC3O15438 1527 aa11.83□□□□□ -0.52
TCF4-266ENST00000628689 DIP2AQ14689 1571 aa11.83□□□□□ -0.52
TCF4-266ENST00000628689 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
TCF4-266ENST00000628689 NKTRP30414 1462 aaKnown RBP11.82□□□□□ -0.52
TCF4-266ENST00000628689 MBD5Q9P267 1494 aa11.81□□□□□ -0.52
TCF4-266ENST00000628689 TET3O43151 1660 aa11.81□□□□□ -0.52
TCF4-266ENST00000628689 KDM5AP29375 1690 aaKnown RBP11.81□□□□□ -0.52
TCF4-266ENST00000628689 TMEM2Q9UHN6 1383 aa11.8□□□□□ -0.52
TCF4-266ENST00000628689 DEFB132Q7Z7B7 95 aa11.79□□□□□ -0.52
TCF4-266ENST00000628689 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
TCF4-266ENST00000628689 CCDC18Q5T9S5 1454 aa11.77□□□□□ -0.52
TCF4-266ENST00000628689 HRCP23327 699 aa11.77□□□□□ -0.53
TCF4-266ENST00000628689 BRINP3Q76B58 766 aa11.77□□□□□ -0.53
TCF4-266ENST00000628689 CCNB3Q8WWL7 1395 aa11.77□□□□□ -0.53
TCF4-266ENST00000628689 PSDA5PKW4 1024 aaPredicted RBP11.76□□□□□ -0.53
TCF4-266ENST00000628689 ADAMTS2O95450 1211 aa11.76□□□□□ -0.53
TCF4-266ENST00000628689 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
TCF4-266ENST00000628689 CADPS2Q86UW7 1296 aa11.76□□□□□ -0.53
TCF4-266ENST00000628689 TRPC5Q9UL62 973 aaPredicted RBP11.76□□□□□ -0.53
TCF4-266ENST00000628689 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
TCF4-266ENST00000628689 C14orf37Q86TY3 774 aa11.75□□□□□ -0.53
TCF4-266ENST00000628689 USP21Q9UK80 565 aa11.75□□□□□ -0.53
TCF4-266ENST00000628689 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
TCF4-266ENST00000628689 ATF3P18847 181 aa11.74□□□□□ -0.53
TCF4-266ENST00000628689 LRRC59Q96AG4 307 aaKnown RBP11.74□□□□□ -0.53
TCF4-266ENST00000628689 C19orf44Q9H6X5 657 aa11.74□□□□□ -0.53
TCF4-266ENST00000628689 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
TCF4-266ENST00000628689 CASKIN1Q8WXD9 1431 aa11.74□□□□□ -0.53
TCF4-266ENST00000628689 NHSL1Q5SYE7 1610 aa11.74□□□□□ -0.53
TCF4-266ENST00000628689 CHD2O14647 1828 aaKnown RBP11.73□□□□□ -0.53
TCF4-266ENST00000628689 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
TCF4-266ENST00000628689 BLMP54132 1417 aaPredicted RBP11.73□□□□□ -0.53
TCF4-266ENST00000628689 NCOA3Q9Y6Q9 1424 aa11.73□□□□□ -0.53
TCF4-266ENST00000628689 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
TCF4-266ENST00000628689 PIK3C2BO00750 1634 aa11.72□□□□□ -0.53
TCF4-266ENST00000628689 CAMSAP2Q08AD1 1489 aa11.72□□□□□ -0.53
TCF4-266ENST00000628689 EEA1Q15075 1411 aa11.72□□□□□ -0.53
TCF4-266ENST00000628689 BCANQ96GW7 911 aa11.72□□□□□ -0.53
TCF4-266ENST00000628689 PNPLA6Q8IY17 1366 aa11.71□□□□□ -0.53
TCF4-266ENST00000628689 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.53
TCF4-266ENST00000628689 ATRNO75882 1429 aa11.7□□□□□ -0.54
TCF4-266ENST00000628689 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
TCF4-266ENST00000628689 BCL9LQ86UU0 1499 aa11.7□□□□□ -0.54
TCF4-266ENST00000628689 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
TCF4-266ENST00000628689 IDI1Q13907 227 aa11.69□□□□□ -0.54
TCF4-266ENST00000628689 DDX17Q92841 729 aaKnown RBP11.69□□□□□ -0.54
TCF4-266ENST00000628689 CEP152O94986 1710 aa11.69□□□□□ -0.54
TCF4-266ENST00000628689 EFCAB6Q5THR3 1501 aa11.68□□□□□ -0.54
TCF4-266ENST00000628689 MROH1Q8NDA8 1641 aa11.68□□□□□ -0.54
TCF4-266ENST00000628689 APLP2Q06481 763 aa11.67□□□□□ -0.54
TCF4-266ENST00000628689 SF3B2Q13435 895 aaKnown RBP11.67□□□□□ -0.54
TCF4-266ENST00000628689 RSPH4AQ5TD94 716 aa11.67□□□□□ -0.54
TCF4-266ENST00000628689 CCDC141Q6ZP82 1450 aa11.67□□□□□ -0.54
TCF4-266ENST00000628689 ASXL1Q8IXJ9 1541 aa11.66□□□□□ -0.54
TCF4-266ENST00000628689 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
TCF4-266ENST00000628689 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.54
TCF4-266ENST00000628689 TBX22Q9Y458 520 aa11.64□□□□□ -0.55
TCF4-266ENST00000628689 TSPY4P0CV99 314 aa11.63□□□□□ -0.55
TCF4-266ENST00000628689 TSPY10P0CW01 314 aa11.63□□□□□ -0.55
TCF4-266ENST00000628689 R3HDM1Q15032 1099 aaKnown RBP11.62□□□□□ -0.55
TCF4-266ENST00000628689 PLEKHG1Q9ULL1 1385 aa11.61□□□□□ -0.55
TCF4-266ENST00000628689 MST1RQ04912 1400 aa11.6□□□□□ -0.55
TCF4-266ENST00000628689 PTCH1Q13635 1447 aa11.6□□□□□ -0.55
TCF4-266ENST00000628689 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
TCF4-266ENST00000628689 FYCO1Q9BQS8 1478 aa11.6□□□□□ -0.55
TCF4-266ENST00000628689 MTUS2Q5JR59 1369 aa11.6□□□□□ -0.55
TCF4-266ENST00000628689 C1QTNF8P60827 252 aa11.6□□□□□ -0.55
TCF4-266ENST00000628689 CACNB1Q02641 598 aaPredicted RBP11.6□□□□□ -0.55
TCF4-266ENST00000628689 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
TCF4-266ENST00000628689 PPP1R15AO75807 674 aaPredicted RBP11.59□□□□□ -0.55
TCF4-266ENST00000628689 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
TCF4-266ENST00000628689 EIF2AK4Q9P2K8 1649 aaKnown RBP11.58□□□□□ -0.56
TCF4-266ENST00000628689 BAG6P46379 1132 aa11.58□□□□□ -0.56
TCF4-266ENST00000628689 ATF5Q9Y2D1 282 aaPredicted RBP11.58□□□□□ -0.56
TCF4-266ENST00000628689 UNC13BO14795 1591 aa11.58□□□□□ -0.56
TCF4-266ENST00000628689 AMOTL2Q9Y2J4 779 aa11.57□□□□□ -0.56
TCF4-266ENST00000628689 DCCP43146 1447 aa11.57□□□□□ -0.56
TCF4-266ENST00000628689 ZFYVE9O95405 1425 aa11.56□□□□□ -0.56
TCF4-266ENST00000628689 ADAMTS13Q76LX8 1427 aa11.55□□□□□ -0.56
TCF4-266ENST00000628689 EN1Q05925 392 aaPredicted RBP11.55□□□□□ -0.56
TCF4-266ENST00000628689 SEPT12Q8IYM1 358 aa11.55□□□□□ -0.56
TCF4-266ENST00000628689 ADGRB3O60242 1522 aa11.55□□□□□ -0.56
TCF4-266ENST00000628689 PIK3R4Q99570 1358 aa11.54□□□□□ -0.56
TCF4-266ENST00000628689 GLI3P10071 1580 aa11.54□□□□□ -0.56
TCF4-266ENST00000628689 CEP350Q5VT06 3117 aa11.54□□□□□ -0.56
TCF4-266ENST00000628689 HDGFP51858 240 aaKnown RBP11.54□□□□□ -0.56
TCF4-266ENST00000628689 RALGAPBQ86X10 1494 aa11.54□□□□□ -0.56
TCF4-266ENST00000628689 SOS2Q07890 1332 aaPredicted RBP11.54□□□□□ -0.56
TCF4-266ENST00000628689 ARHGEF5Q12774 1597 aa11.54□□□□□ -0.56
TCF4-266ENST00000628689 RIMS2Q9UQ26 1411 aa11.53□□□□□ -0.56
TCF4-266ENST00000628689 SLC52A1Q9NWF4 448 aa11.53□□□□□ -0.56
TCF4-266ENST00000628689 PTPRUQ92729 1446 aa11.52□□□□□ -0.56
TCF4-266ENST00000628689 SPHKAPQ2M3C7 1700 aa11.52□□□□□ -0.56
TCF4-266ENST00000628689 MYO5BQ9ULV0 1848 aa11.52□□□□□ -0.57
TCF4-266ENST00000628689 CAPN15O75808 1086 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms