RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 ALKQ9UM73 1620 aa24.96■■□□□ 1.59
LINC00628-201ENST00000628516 HDGFP51858 240 aaKnown RBP24.95■■□□□ 1.58
LINC00628-201ENST00000628516 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
LINC00628-201ENST00000628516 PPP1R15AO75807 674 aaPredicted RBP24.94■■□□□ 1.58
LINC00628-201ENST00000628516 KCNA6P17658 529 aa24.94■■□□□ 1.58
LINC00628-201ENST00000628516 ZFYVE9O95405 1425 aa24.94■■□□□ 1.58
LINC00628-201ENST00000628516 RIMS2Q9UQ26 1411 aa24.94■■□□□ 1.58
LINC00628-201ENST00000628516 TMEM131LA2VDJ0 1609 aa24.94■■□□□ 1.58
LINC00628-201ENST00000628516 MYO5BQ9ULV0 1848 aa24.93■■□□□ 1.58
LINC00628-201ENST00000628516 PLEKHG1Q9ULL1 1385 aa24.9■■□□□ 1.58
LINC00628-201ENST00000628516 PROSER2Q86WR7 435 aaPredicted RBP24.88■■□□□ 1.57
LINC00628-201ENST00000628516 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.88■■□□□ 1.57
LINC00628-201ENST00000628516 TMEM94Q12767 1356 aa24.88■■□□□ 1.57
LINC00628-201ENST00000628516 XIRP1Q702N8 1843 aaKnown RBP24.87■■□□□ 1.57
LINC00628-201ENST00000628516 NUTM2DQ5VT03 806 aaPredicted RBP24.87■■□□□ 1.57
LINC00628-201ENST00000628516 RBM33Q96EV2 1170 aaKnown RBP24.85■■□□□ 1.57
LINC00628-201ENST00000628516 NAIPQ13075 1403 aa24.85■■□□□ 1.57
LINC00628-201ENST00000628516 NWD1Q149M9 1564 aa24.82■■□□□ 1.56
LINC00628-201ENST00000628516 NKTRP30414 1462 aaKnown RBP24.82■■□□□ 1.56
LINC00628-201ENST00000628516 TBX22Q9Y458 520 aa24.81■■□□□ 1.56
LINC00628-201ENST00000628516 SPHKAPQ2M3C7 1700 aa24.79■■□□□ 1.56
LINC00628-201ENST00000628516 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
LINC00628-201ENST00000628516 ADAMTS13Q76LX8 1427 aa24.77■■□□□ 1.56
LINC00628-201ENST00000628516 CHD2O14647 1828 aaKnown RBP24.76■■□□□ 1.55
LINC00628-201ENST00000628516 HFM1A2PYH4 1435 aa24.76■■□□□ 1.55
LINC00628-201ENST00000628516 MED1Q15648 1581 aaPredicted RBP24.76■■□□□ 1.55
LINC00628-201ENST00000628516 ZNF326Q5BKZ1 582 aaKnown RBP24.75■■□□□ 1.55
LINC00628-201ENST00000628516 MSH6P52701 1360 aa24.74■■□□□ 1.55
LINC00628-201ENST00000628516 FAM135BQ49AJ0 1406 aa24.73■■□□□ 1.55
LINC00628-201ENST00000628516 DIP2AQ14689 1571 aa24.72■■□□□ 1.55
LINC00628-201ENST00000628516 PIK3R4Q99570 1358 aa24.7■■□□□ 1.55
LINC00628-201ENST00000628516 TRPM2O94759 1503 aa24.69■■□□□ 1.54
LINC00628-201ENST00000628516 CLTCL1P53675 1640 aa24.68■■□□□ 1.54
LINC00628-201ENST00000628516 C14orf37Q86TY3 774 aa24.68■■□□□ 1.54
LINC00628-201ENST00000628516 SLC4A1APQ9BWU0 796 aaKnown RBP24.68■■□□□ 1.54
LINC00628-201ENST00000628516 PHF23Q9BUL5 403 aaPredicted RBP24.66■■□□□ 1.54
LINC00628-201ENST00000628516 AMOTL2Q9Y2J4 779 aa24.66■■□□□ 1.54
LINC00628-201ENST00000628516 ROBO1Q9Y6N7 1651 aa24.66■■□□□ 1.54
LINC00628-201ENST00000628516 SLAIN2Q9P270 581 aa24.65■■□□□ 1.54
LINC00628-201ENST00000628516 NCOA3Q9Y6Q9 1424 aa24.65■■□□□ 1.54
LINC00628-201ENST00000628516 PTPRUQ92729 1446 aa24.63■■□□□ 1.53
LINC00628-201ENST00000628516 SETBP1Q9Y6X0 1596 aa24.63■■□□□ 1.53
LINC00628-201ENST00000628516 NRXN3Q9Y4C0 1643 aa24.61■■□□□ 1.53
LINC00628-201ENST00000628516 KIF1BO60333 1816 aa24.61■■□□□ 1.53
LINC00628-201ENST00000628516 NEXMIFQ5QGS0 1516 aa24.6■■□□□ 1.53
LINC00628-201ENST00000628516 C19orf44Q9H6X5 657 aa24.59■■□□□ 1.53
LINC00628-201ENST00000628516 ATF3P18847 181 aa24.57■■□□□ 1.52
LINC00628-201ENST00000628516 CADPS2Q86UW7 1296 aa24.57■■□□□ 1.52
LINC00628-201ENST00000628516 METP08581 1390 aa24.56■■□□□ 1.52
LINC00628-201ENST00000628516 FOXD1Q16676 465 aa24.56■■□□□ 1.52
LINC00628-201ENST00000628516 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.55■■□□□ 1.52
LINC00628-201ENST00000628516 VGFO15240 615 aaPredicted RBP24.54■■□□□ 1.52
LINC00628-201ENST00000628516 XRN1Q8IZH2 1706 aaKnown RBP24.53■■□□□ 1.52
LINC00628-201ENST00000628516 RPGRIP1LQ68CZ1 1315 aa24.51■■□□□ 1.51
LINC00628-201ENST00000628516 PHLPP1O60346 1717 aa24.5■■□□□ 1.51
LINC00628-201ENST00000628516 MPHOSPH9Q99550 1183 aa24.5■■□□□ 1.51
LINC00628-201ENST00000628516 CCDC144AA2RUR9 1427 aa24.46■■□□□ 1.51
LINC00628-201ENST00000628516 DCCP43146 1447 aa24.46■■□□□ 1.51
LINC00628-201ENST00000628516 JCADQ9P266 1359 aa24.45■■□□□ 1.5
LINC00628-201ENST00000628516 RGS17Q9UGC6 210 aaPredicted RBP24.45■■□□□ 1.5
LINC00628-201ENST00000628516 RGL3Q3MIN7 710 aa24.43■■□□□ 1.5
LINC00628-201ENST00000628516 BRINP3Q76B58 766 aa24.43■■□□□ 1.5
LINC00628-201ENST00000628516 SETD5Q9C0A6 1442 aa24.43■■□□□ 1.5
LINC00628-201ENST00000628516 COL16A1Q07092 1604 aaPredicted RBP24.43■■□□□ 1.5
LINC00628-201ENST00000628516 PPLO60437 1756 aa24.42■■□□□ 1.5
LINC00628-201ENST00000628516 ACIN1Q9UKV3 1341 aaKnown RBP24.41■■□□□ 1.5
LINC00628-201ENST00000628516 ADGRL3Q9HAR2 1447 aa24.41■■□□□ 1.5
LINC00628-201ENST00000628516 AHDC1Q5TGY3 1603 aaPredicted RBP24.4■■□□□ 1.5
LINC00628-201ENST00000628516 SETD1AO15047 1707 aaKnown RBP24.39■■□□□ 1.5
LINC00628-201ENST00000628516 MST1RQ04912 1400 aa24.39■■□□□ 1.5
LINC00628-201ENST00000628516 PTCH1Q13635 1447 aa24.37■■□□□ 1.49
LINC00628-201ENST00000628516 SPATA31E1Q6ZUB1 1445 aa24.37■■□□□ 1.49
LINC00628-201ENST00000628516 ROBO2Q9HCK4 1378 aa24.37■■□□□ 1.49
LINC00628-201ENST00000628516 ADGRF5Q8IZF2 1346 aa24.36■■□□□ 1.49
LINC00628-201ENST00000628516 ASXL1Q8IXJ9 1541 aa24.35■■□□□ 1.49
LINC00628-201ENST00000628516 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
LINC00628-201ENST00000628516 SPATA31A6Q5VVP1 1343 aa24.34■■□□□ 1.49
LINC00628-201ENST00000628516 ANKRD30BQ9BXX2 1392 aa24.33■■□□□ 1.49
LINC00628-201ENST00000628516 RAB3GAP2Q9H2M9 1393 aa24.33■■□□□ 1.49
LINC00628-201ENST00000628516 POTEAQ6S8J7 498 aa24.32■■□□□ 1.48
LINC00628-201ENST00000628516 PRAG1Q86YV5 1406 aa24.31■■□□□ 1.48
LINC00628-201ENST00000628516 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
LINC00628-201ENST00000628516 SHPRHQ149N8 1683 aa24.28■■□□□ 1.48
LINC00628-201ENST00000628516 C1orf167Q5SNV9 1468 aa24.28■■□□□ 1.48
LINC00628-201ENST00000628516 DDX17Q92841 729 aaKnown RBP24.28■■□□□ 1.48
LINC00628-201ENST00000628516 LRP6O75581 1613 aa24.28■■□□□ 1.48
LINC00628-201ENST00000628516 IFT172Q9UG01 1749 aa24.27■■□□□ 1.48
LINC00628-201ENST00000628516 STK26Q9P289 416 aa24.27■■□□□ 1.48
LINC00628-201ENST00000628516 NHSL1Q5SYE7 1610 aa24.27■■□□□ 1.48
LINC00628-201ENST00000628516 LRRC59Q96AG4 307 aaKnown RBP24.26■■□□□ 1.47
LINC00628-201ENST00000628516 TMEM132EQ6IEE7 984 aa24.25■■□□□ 1.47
LINC00628-201ENST00000628516 PIK3C2GO75747 1445 aa24.25■■□□□ 1.47
LINC00628-201ENST00000628516 NUTM2BA6NNL0 878 aaPredicted RBP24.24■■□□□ 1.47
LINC00628-201ENST00000628516 NUTM2EB1AL46 878 aaPredicted RBP24.24■■□□□ 1.47
LINC00628-201ENST00000628516 NUTM2AQ8IVF1 878 aaPredicted RBP24.24■■□□□ 1.47
LINC00628-201ENST00000628516 ORAI2Q96SN7 254 aa24.23■■□□□ 1.47
LINC00628-201ENST00000628516 LRPPRCP42704 1394 aaKnown RBP24.22■■□□□ 1.47
LINC00628-201ENST00000628516 WAPLQ7Z5K2 1190 aa24.21■■□□□ 1.47
LINC00628-201ENST00000628516 TECPR2O15040 1411 aa24.19■■□□□ 1.46
LINC00628-201ENST00000628516 ABCC11Q96J66 1382 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms